Gene annotation
Transcriptome id Sobic.008G190100.2,Sobic.008G190100.1
Synonym Sb08g023050, ACAT2, EMB1276
Functional annotation acetyl-CoA acetyltransferase, cytosolic, putative, expressed
UniProt A0A1B6PEL7
Pfam PF02803 PF00108
Panther DB PTHR18919 PTHR18919:SF84
NCBI CDD -
KEGG Orthology K00626; ACAT, acetyl-CoA C-acetyltransferase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G47720 : Thiolase family protein
RAP-DB (Rice) LOC_Os09g07830.1,LOC_Os09g07830.2 : acetyl-CoA acetyltransferase, cytosolic, putative, expressed
MaizeGDB (Corn) Zm00025a002746 , Zm00025a004866
Brachypodium KQJ81665 , KQJ81666
Barley HORVU5Hr1G052090.11 , HORVU5Hr1G052090.10 , HORVU2Hr1G005420.5 , HORVU2Hr1G005420.4 , HORVU2Hr1G005420.6 , HORVU2Hr1G005420.1 , HORVU2Hr1G005420.3 , HORVU2Hr1G005420.2 , HORVU5Hr1G052090.3 , HORVU5Hr1G052090.2 , HORVU5Hr1G052090.1 , HORVU5Hr1G052090.7 , HORVU5Hr1G052090.6 , HORVU5Hr1G052090.5 , HORVU5Hr1G052090.4 , HORVU5Hr1G052090.9 , HORVU5Hr1G052090.8
Wheat TraesCS5A02G169400 , TraesCS5B02G166200 , TraesCS5B02G166200 , TraesCS2B02G049200 , TraesCS5D02G173800
Populus -


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cDNA sequences
Sobic.008G190100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G213400 bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
2 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
3 Sobic.006G147600 L-allo-threonine aldolase, putative, expressed K01620: threonine aldolase
4 Sobic.002G231500 phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed K01923: phosphoribosylaminoimidazole-succinocarboxamide synthase
5 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
6 Sobic.002G375800 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
7 Sobic.007G161200 expressed protein -
8 Sobic.002G073700 cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
9 Sobic.006G237000 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed K00648: 3-oxoacyl-[acyl-carrier-protein] synthase III
10 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
11 Sobic.005G018800 expressed protein -
12 Sobic.003G165101 - K12876: RBM8A, RNA-binding protein 8A
13 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
14 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
15 Sobic.001G447300 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
16 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
17 Sobic.010G179700 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
18 Sobic.006G035500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
19 Sobic.007G145400 expressed protein -
20 Sobic.005G106200 expressed protein K10290: F-box protein 3


Gene co-expression network
sample Sobic008G190100 Sobic008G190100 Sobic006G213400 Sobic006G213400 Sobic008G190100--Sobic006G213400 Sobic004G060100 Sobic004G060100 Sobic008G190100--Sobic004G060100 Sobic006G147600 Sobic006G147600 Sobic008G190100--Sobic006G147600 Sobic002G231500 Sobic002G231500 Sobic008G190100--Sobic002G231500 Sobic004G275600 Sobic004G275600 Sobic008G190100--Sobic004G275600 Sobic002G375800 Sobic002G375800 Sobic008G190100--Sobic002G375800 Sobic007G161200 Sobic007G161200 Sobic008G190100--Sobic007G161200 Sobic002G073700 Sobic002G073700 Sobic008G190100--Sobic002G073700 Sobic006G237000 Sobic006G237000 Sobic008G190100--Sobic006G237000 Sobic006G213400--Sobic002G231500 Sobic006G213400--Sobic008G190100 Sobic007G071900 Sobic007G071900 Sobic006G213400--Sobic007G071900 Sobic006G043700 Sobic006G043700 Sobic006G213400--Sobic006G043700 Sobic008G088857 Sobic008G088857 Sobic006G213400--Sobic008G088857 Sobic009G072000 Sobic009G072000 Sobic006G213400--Sobic009G072000 Sobic009G249800 Sobic009G249800 Sobic006G213400--Sobic009G249800 Sobic006G010400 Sobic006G010400 Sobic006G213400--Sobic006G010400 Sobic006G213400--Sobic004G275600 Sobic008G021200 Sobic008G021200 Sobic004G060100--Sobic008G021200 Sobic004G060100--Sobic007G161200 Sobic005G018800 Sobic005G018800 Sobic004G060100--Sobic005G018800 Sobic009G256000 Sobic009G256000 Sobic004G060100--Sobic009G256000 Sobic003G200800 Sobic003G200800 Sobic004G060100--Sobic003G200800 Sobic004G283600 Sobic004G283600 Sobic004G060100--Sobic004G283600 Sobic005G004100 Sobic005G004100 Sobic004G060100--Sobic005G004100 Sobic002G321400 Sobic002G321400 Sobic004G060100--Sobic002G321400 Sobic001G435400 Sobic001G435400 Sobic004G060100--Sobic001G435400 Sobic006G147600--Sobic008G190100 Sobic010G155600 Sobic010G155600 Sobic006G147600--Sobic010G155600 Sobic006G147600--Sobic002G073700 Sobic006G147600--Sobic006G237000 Sobic001G537500 Sobic001G537500 Sobic006G147600--Sobic001G537500 Sobic006G147600--Sobic004G275600 Sobic010G218400 Sobic010G218400 Sobic006G147600--Sobic010G218400 Sobic006G277000 Sobic006G277000 Sobic006G147600--Sobic006G277000 Sobic006G166200 Sobic006G166200 Sobic006G147600--Sobic006G166200 Sobic002G231500--Sobic007G071900 Sobic002G231500--Sobic006G213400 Sobic001G382600 Sobic001G382600 Sobic002G231500--Sobic001G382600 Sobic004G310500 Sobic004G310500 Sobic002G231500--Sobic004G310500 Sobic001G447300 Sobic001G447300 Sobic002G231500--Sobic001G447300 Sobic002G020700 Sobic002G020700 Sobic002G231500--Sobic002G020700 Sobic008G156700 Sobic008G156700 Sobic002G231500--Sobic008G156700 Sobic008G055900 Sobic008G055900 Sobic002G231500--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic002G231500--Sobic008G033500 Sobic003G309300 Sobic003G309300 Sobic004G275600--Sobic003G309300 Sobic003G165101 Sobic003G165101 Sobic004G275600--Sobic003G165101 Sobic004G275600--Sobic001G537500 Sobic009G124000 Sobic009G124000 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic004G275600--Sobic007G071900 Sobic003G420900 Sobic003G420900 Sobic004G275600--Sobic003G420900 Sobic008G067100 Sobic008G067100 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic008G113600 Sobic008G113600 Sobic002G375800--Sobic008G113600 Sobic009G117500 Sobic009G117500 Sobic002G375800--Sobic009G117500 Sobic002G375800--Sobic004G060100 Sobic008G150300 Sobic008G150300 Sobic002G375800--Sobic008G150300 Sobic002G375800--Sobic008G190100 Sobic008G186200 Sobic008G186200 Sobic002G375800--Sobic008G186200 Sobic002G375800--Sobic007G161200 Sobic005G020900 Sobic005G020900 Sobic002G375800--Sobic005G020900 Sobic008G032600 Sobic008G032600 Sobic002G375800--Sobic008G032600 Sobic007G161200--Sobic004G060100 Sobic007G161200--Sobic003G200800 Sobic007G161200--Sobic005G018800 Sobic007G161200--Sobic009G256000 Sobic004G347600 Sobic004G347600 Sobic007G161200--Sobic004G347600 Sobic007G161200--Sobic008G021200 Sobic001G115700 Sobic001G115700 Sobic007G161200--Sobic001G115700 Sobic007G161200--Sobic008G150300 Sobic007G161200--Sobic004G283600 Sobic002G073700--Sobic008G190100 Sobic002G073700--Sobic002G231500 Sobic002G073700--Sobic006G147600 Sobic002G073700--Sobic006G213400 Sobic009G176700 Sobic009G176700 Sobic002G073700--Sobic009G176700 Sobic002G073700--Sobic001G447300 Sobic003G039000 Sobic003G039000 Sobic002G073700--Sobic003G039000 Sobic002G073700--Sobic006G237000 Sobic003G388000 Sobic003G388000 Sobic002G073700--Sobic003G388000 Sobic002G125800 Sobic002G125800 Sobic006G237000--Sobic002G125800 Sobic005G031000 Sobic005G031000 Sobic006G237000--Sobic005G031000 Sobic001G200200 Sobic001G200200 Sobic006G237000--Sobic001G200200 Sobic006G237000--Sobic010G155600 Sobic010G003900 Sobic010G003900 Sobic006G237000--Sobic010G003900 Sobic002G155100 Sobic002G155100 Sobic006G237000--Sobic002G155100 Sobic008G059900 Sobic008G059900 Sobic006G237000--Sobic008G059900 Sobic005G098800 Sobic005G098800 Sobic006G237000--Sobic005G098800 Sobic006G237000--Sobic001G537500
Octagon: transcription factors


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