Gene annotation
Transcriptome id Sobic.003G235000.1
Synonym Sb03g029240
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XEK6
Pfam PF14531
Panther DB PTHR23257 PTHR23257:SF512
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01490 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g45380.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036686 , Zm00025a038671 , Zm00025a028282
Brachypodium KQK04729 , KQK08923 , PNT72468 , PNT72467
Barley HORVU1Hr1G091230.3 , HORVU1Hr1G091230.1 , HORVU1Hr1G091230.6 , HORVU1Hr1G091230.5 , HORVU1Hr1G091230.8 , HORVU1Hr1G091230.10 , HORVU1Hr1G091230.11 , HORVU1Hr1G091230.12 , HORVU3Hr1G057440.1 , HORVU3Hr1G057440.3 , HORVU3Hr1G057440.2 , HORVU3Hr1G057440.5 , HORVU3Hr1G057440.4 , HORVU3Hr1G057440.7 , HORVU3Hr1G057440.6 , HORVU3Hr1G057440.8
Wheat TraesCS1A02G416200 , TraesCS1D02G423800 , TraesCS3A02G230500 , TraesCS3B02G259800 , TraesCS3D02G222800 , TraesCS1B02G446500
Populus PNT58394 , PNS95689 , PNT47876 , PNT47874 , PNT47875 , PNT47870 , PNT47871 , PNT47872


JBrowse

Open New Page


cDNA sequences
Sobic.003G235000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G163700 T-complex protein, putative, expressed K09500: T-complex protein 1 subunit theta
2 Sobic.002G127400 glycosyl hydrolase family 10 protein, putative, expressed -
3 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
4 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
5 Sobic.008G088851 - -
6 Sobic.007G187900 OsFBX187 - F-box domain containing protein, expressed -
7 Sobic.004G245000 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
8 Sobic.009G105900 amino acid permease family protein, putative, expressed K14427: SLC12A4_6, solute carrier family 12 (potassium/chloride transporter), member 4/6
9 Sobic.003G294600 Homeobox domain containing protein, expressed -
10 Sobic.002G009300 expressed protein K01427: urease
11 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
12 Sobic.007G010900 esterase, putative, expressed -
13 Sobic.009G010300 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
14 Sobic.010G269100 zinc finger family protein, putative, expressed -
15 Sobic.008G088857 - -
16 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
17 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
18 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
19 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
20 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G235000 Sobic003G235000 Sobic005G163700 Sobic005G163700 Sobic003G235000--Sobic005G163700 Sobic002G127400 Sobic002G127400 Sobic003G235000--Sobic002G127400 Sobic004G047200 Sobic004G047200 Sobic003G235000--Sobic004G047200 Sobic001G460500 Sobic001G460500 Sobic003G235000--Sobic001G460500 Sobic008G088851 Sobic008G088851 Sobic003G235000--Sobic008G088851 Sobic007G187900 Sobic007G187900 Sobic003G235000--Sobic007G187900 Sobic004G245000 Sobic004G245000 Sobic003G235000--Sobic004G245000 Sobic009G105900 Sobic009G105900 Sobic003G235000--Sobic009G105900 Sobic003G294600 Sobic003G294600 Sobic003G235000--Sobic003G294600 Sobic005G163700--Sobic001G460500 Sobic002G423500 Sobic002G423500 Sobic005G163700--Sobic002G423500 Sobic002G014400 Sobic002G014400 Sobic005G163700--Sobic002G014400 Sobic005G163700--Sobic004G047200 Sobic004G215700 Sobic004G215700 Sobic005G163700--Sobic004G215700 Sobic004G326600 Sobic004G326600 Sobic005G163700--Sobic004G326600 Sobic001G467100 Sobic001G467100 Sobic005G163700--Sobic001G467100 Sobic004G208500 Sobic004G208500 Sobic005G163700--Sobic004G208500 Sobic002G412700 Sobic002G412700 Sobic005G163700--Sobic002G412700 Sobic001G338800 Sobic001G338800 Sobic002G127400--Sobic001G338800 Sobic002G127400--Sobic003G294600 Sobic003G435500 Sobic003G435500 Sobic002G127400--Sobic003G435500 Sobic005G216300 Sobic005G216300 Sobic002G127400--Sobic005G216300 Sobic001G335900 Sobic001G335900 Sobic002G127400--Sobic001G335900 Sobic001G518400 Sobic001G518400 Sobic002G127400--Sobic001G518400 Sobic009G142000 Sobic009G142000 Sobic002G127400--Sobic009G142000 Sobic010G138900 Sobic010G138900 Sobic002G127400--Sobic010G138900 Sobic003G314700 Sobic003G314700 Sobic002G127400--Sobic003G314700 Sobic004G047200--Sobic004G326600 Sobic004G047200--Sobic002G423500 Sobic004G047200--Sobic002G014400 Sobic001G008500 Sobic001G008500 Sobic004G047200--Sobic001G008500 Sobic004G047200--Sobic005G163700 Sobic001G530800 Sobic001G530800 Sobic004G047200--Sobic001G530800 Sobic004G047200--Sobic004G215700 Sobic004G047200--Sobic001G460500 Sobic001G371100 Sobic001G371100 Sobic004G047200--Sobic001G371100 Sobic001G460500--Sobic005G163700 Sobic001G460500--Sobic002G423500 Sobic001G460500--Sobic002G014400 Sobic001G460500--Sobic004G208500 Sobic010G081700 Sobic010G081700 Sobic001G460500--Sobic010G081700 Sobic001G460500--Sobic004G047200 Sobic001G460500--Sobic002G412700 Sobic001G251600 Sobic001G251600 Sobic001G460500--Sobic001G251600 Sobic003G099300 Sobic003G099300 Sobic001G460500--Sobic003G099300 Sobic008G088857 Sobic008G088857 Sobic008G088851--Sobic008G088857 Sobic002G009300 Sobic002G009300 Sobic008G088851--Sobic002G009300 Sobic003G164200 Sobic003G164200 Sobic008G088851--Sobic003G164200 Sobic006G049600 Sobic006G049600 Sobic008G088851--Sobic006G049600 Sobic010G080700 Sobic010G080700 Sobic008G088851--Sobic010G080700 Sobic004G127700 Sobic004G127700 Sobic008G088851--Sobic004G127700 Sobic009G047200 Sobic009G047200 Sobic008G088851--Sobic009G047200 Sobic001G404600 Sobic001G404600 Sobic008G088851--Sobic001G404600 Sobic008G088851--Sobic003G294600 Sobic003G408300 Sobic003G408300 Sobic007G187900--Sobic003G408300 Sobic001G517200 Sobic001G517200 Sobic007G187900--Sobic001G517200 Sobic007G187900--Sobic009G105900 Sobic007G187900--Sobic003G235000 Sobic002G429400 Sobic002G429400 Sobic007G187900--Sobic002G429400 Sobic003G006400 Sobic003G006400 Sobic007G187900--Sobic003G006400 Sobic002G429700 Sobic002G429700 Sobic007G187900--Sobic002G429700 Sobic001G471000 Sobic001G471000 Sobic007G187900--Sobic001G471000 Sobic003G382500 Sobic003G382500 Sobic007G187900--Sobic003G382500 Sobic004G245000--Sobic003G235000 Sobic002G333500 Sobic002G333500 Sobic004G245000--Sobic002G333500 Sobic010G017800 Sobic010G017800 Sobic004G245000--Sobic010G017800 Sobic004G344901 Sobic004G344901 Sobic004G245000--Sobic004G344901 Sobic004G245000--Sobic002G127400 Sobic001G163400 Sobic001G163400 Sobic004G245000--Sobic001G163400 Sobic001G119800 Sobic001G119800 Sobic004G245000--Sobic001G119800 Sobic002G408800 Sobic002G408800 Sobic004G245000--Sobic002G408800 Sobic004G245000--Sobic005G216300 Sobic002G327000 Sobic002G327000 Sobic009G105900--Sobic002G327000 Sobic009G105900--Sobic002G423500 Sobic006G056200 Sobic006G056200 Sobic009G105900--Sobic006G056200 Sobic007G010900 Sobic007G010900 Sobic009G105900--Sobic007G010900 Sobic006G173200 Sobic006G173200 Sobic009G105900--Sobic006G173200 Sobic009G105900--Sobic005G163700 Sobic009G105900--Sobic004G047200 Sobic009G105900--Sobic001G460500 Sobic002G194800 Sobic002G194800 Sobic009G105900--Sobic002G194800 Sobic008G002500 Sobic008G002500 Sobic003G294600--Sobic008G002500 Sobic003G294600--Sobic009G142000 Sobic009G088000 Sobic009G088000 Sobic003G294600--Sobic009G088000 Sobic001G453000 Sobic001G453000 Sobic003G294600--Sobic001G453000 Sobic010G148932 Sobic010G148932 Sobic003G294600--Sobic010G148932 Sobic007G077900 Sobic007G077900 Sobic003G294600--Sobic007G077900 Sobic006G040800 Sobic006G040800 Sobic003G294600--Sobic006G040800 Sobic003G445500 Sobic003G445500 Sobic003G294600--Sobic003G445500 Sobic010G053600 Sobic010G053600 Sobic003G294600--Sobic010G053600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.