Gene annotation
Transcriptome id Sobic.007G187900.1
Synonym Sb07g025780
Functional annotation OsFBX187 - F-box domain containing protein, expressed
UniProt C5YHM4
Pfam PF08387
Panther DB PTHR31639 PTHR31639:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os06g06600.1 : OsFBX187 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G408300 WD domain, G-beta repeat domain containing protein, expressed K14791: periodic tryptophan protein 1
2 Sobic.001G517200 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
3 Sobic.009G105900 amino acid permease family protein, putative, expressed K14427: SLC12A4_6, solute carrier family 12 (potassium/chloride transporter), member 4/6
4 Sobic.003G235000 protein kinase domain containing protein, expressed -
5 Sobic.002G429400 PPR repeat containing protein, expressed -
6 Sobic.003G006400 metallo-beta-lactamase family protein, putative, expressed K00784: ribonuclease Z
7 Sobic.002G429700 AMP deaminase, putative, expressed K01490: AMP deaminase
8 Sobic.001G471000 RNase L inhibitor protein-related, putative, expressed K09140: pre-rRNA-processing protein TSR3
9 Sobic.003G382500 serine/threonine-protein kinase RIO-like, putative, expressed K07179: RIO kinase 2
10 Sobic.002G127400 glycosyl hydrolase family 10 protein, putative, expressed -
11 Sobic.001G413800 expressed protein K13141: integrator complex subunit 4
12 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
13 Sobic.008G009600 double-stranded RNA binding motif containing protein, expressed -
14 Sobic.003G287100 NADPH reductase, putative, expressed -
15 Sobic.002G127200 CRAL/TRIO domain containing protein, expressed -
16 Sobic.007G010900 esterase, putative, expressed -
17 Sobic.001G017700 diphthamide biosynthesis protein, putative, expressed K17866: diphthamide biosynthesis protein 2
18 Sobic.006G235700 programmed cell death 2 C-terminal domain-containing protein, putative, expressed K14801: pre-rRNA-processing protein TSR4
19 Sobic.009G145101 - -
20 Sobic.004G123400 MYB family transcription factor, putative, expressed K09420: MYB, transcriptional activator Myb


Gene co-expression network
sample Sobic007G187900 Sobic007G187900 Sobic003G408300 Sobic003G408300 Sobic007G187900--Sobic003G408300 Sobic001G517200 Sobic001G517200 Sobic007G187900--Sobic001G517200 Sobic009G105900 Sobic009G105900 Sobic007G187900--Sobic009G105900 Sobic003G235000 Sobic003G235000 Sobic007G187900--Sobic003G235000 Sobic002G429400 Sobic002G429400 Sobic007G187900--Sobic002G429400 Sobic003G006400 Sobic003G006400 Sobic007G187900--Sobic003G006400 Sobic002G429700 Sobic002G429700 Sobic007G187900--Sobic002G429700 Sobic001G471000 Sobic001G471000 Sobic007G187900--Sobic001G471000 Sobic003G382500 Sobic003G382500 Sobic007G187900--Sobic003G382500 Sobic008G016100 Sobic008G016100 Sobic003G408300--Sobic008G016100 Sobic002G263200 Sobic002G263200 Sobic003G408300--Sobic002G263200 Sobic003G408300--Sobic007G187900 Sobic002G116500 Sobic002G116500 Sobic003G408300--Sobic002G116500 Sobic001G168100 Sobic001G168100 Sobic003G408300--Sobic001G168100 Sobic006G084000 Sobic006G084000 Sobic003G408300--Sobic006G084000 Sobic002G332200 Sobic002G332200 Sobic003G408300--Sobic002G332200 Sobic006G251500 Sobic006G251500 Sobic003G408300--Sobic006G251500 Sobic009G143800 Sobic009G143800 Sobic003G408300--Sobic009G143800 Sobic001G517200--Sobic007G187900 Sobic003G368901 Sobic003G368901 Sobic001G517200--Sobic003G368901 Sobic010G063566 Sobic010G063566 Sobic001G517200--Sobic010G063566 Sobic010G015700 Sobic010G015700 Sobic001G517200--Sobic010G015700 Sobic005G028100 Sobic005G028100 Sobic001G517200--Sobic005G028100 Sobic003G189333 Sobic003G189333 Sobic001G517200--Sobic003G189333 Sobic009G145101 Sobic009G145101 Sobic001G517200--Sobic009G145101 Sobic002G105101 Sobic002G105101 Sobic001G517200--Sobic002G105101 Sobic003G002700 Sobic003G002700 Sobic001G517200--Sobic003G002700 Sobic002G327000 Sobic002G327000 Sobic009G105900--Sobic002G327000 Sobic002G423500 Sobic002G423500 Sobic009G105900--Sobic002G423500 Sobic006G056200 Sobic006G056200 Sobic009G105900--Sobic006G056200 Sobic007G010900 Sobic007G010900 Sobic009G105900--Sobic007G010900 Sobic006G173200 Sobic006G173200 Sobic009G105900--Sobic006G173200 Sobic005G163700 Sobic005G163700 Sobic009G105900--Sobic005G163700 Sobic004G047200 Sobic004G047200 Sobic009G105900--Sobic004G047200 Sobic001G460500 Sobic001G460500 Sobic009G105900--Sobic001G460500 Sobic002G194800 Sobic002G194800 Sobic009G105900--Sobic002G194800 Sobic003G235000--Sobic005G163700 Sobic002G127400 Sobic002G127400 Sobic003G235000--Sobic002G127400 Sobic003G235000--Sobic004G047200 Sobic003G235000--Sobic001G460500 Sobic008G088851 Sobic008G088851 Sobic003G235000--Sobic008G088851 Sobic003G235000--Sobic007G187900 Sobic004G245000 Sobic004G245000 Sobic003G235000--Sobic004G245000 Sobic003G235000--Sobic009G105900 Sobic003G294600 Sobic003G294600 Sobic003G235000--Sobic003G294600 Sobic004G289400 Sobic004G289400 Sobic002G429400--Sobic004G289400 Sobic006G180700 Sobic006G180700 Sobic002G429400--Sobic006G180700 Sobic002G429400--Sobic003G006400 Sobic001G413800 Sobic001G413800 Sobic002G429400--Sobic001G413800 Sobic003G014700 Sobic003G014700 Sobic002G429400--Sobic003G014700 Sobic008G098600 Sobic008G098600 Sobic002G429400--Sobic008G098600 Sobic005G028300 Sobic005G028300 Sobic002G429400--Sobic005G028300 Sobic001G334100 Sobic001G334100 Sobic002G429400--Sobic001G334100 Sobic001G122200 Sobic001G122200 Sobic002G429400--Sobic001G122200 Sobic006G208500 Sobic006G208500 Sobic003G006400--Sobic006G208500 Sobic006G200700 Sobic006G200700 Sobic003G006400--Sobic006G200700 Sobic002G275600 Sobic002G275600 Sobic003G006400--Sobic002G275600 Sobic001G369000 Sobic001G369000 Sobic003G006400--Sobic001G369000 Sobic006G138000 Sobic006G138000 Sobic003G006400--Sobic006G138000 Sobic010G151900 Sobic010G151900 Sobic003G006400--Sobic010G151900 Sobic001G145400 Sobic001G145400 Sobic003G006400--Sobic001G145400 Sobic006G077200 Sobic006G077200 Sobic003G006400--Sobic006G077200 Sobic010G007100 Sobic010G007100 Sobic003G006400--Sobic010G007100 Sobic009G155900 Sobic009G155900 Sobic002G429700--Sobic009G155900 Sobic002G429700--Sobic003G368901 Sobic002G127900 Sobic002G127900 Sobic002G429700--Sobic002G127900 Sobic004G031300 Sobic004G031300 Sobic002G429700--Sobic004G031300 Sobic002G429700--Sobic007G187900 Sobic006G088400 Sobic006G088400 Sobic002G429700--Sobic006G088400 Sobic001G039300 Sobic001G039300 Sobic002G429700--Sobic001G039300 Sobic002G429700--Sobic003G002700 Sobic001G542300 Sobic001G542300 Sobic002G429700--Sobic001G542300 Sobic007G112600 Sobic007G112600 Sobic001G471000--Sobic007G112600 Sobic010G235200 Sobic010G235200 Sobic001G471000--Sobic010G235200 Sobic006G142400 Sobic006G142400 Sobic001G471000--Sobic006G142400 Sobic007G042900 Sobic007G042900 Sobic001G471000--Sobic007G042900 Sobic004G068500 Sobic004G068500 Sobic001G471000--Sobic004G068500 Sobic005G155100 Sobic005G155100 Sobic001G471000--Sobic005G155100 Sobic007G077400 Sobic007G077400 Sobic001G471000--Sobic007G077400 Sobic001G477700 Sobic001G477700 Sobic001G471000--Sobic001G477700 Sobic007G162800 Sobic007G162800 Sobic001G471000--Sobic007G162800 Sobic009G138700 Sobic009G138700 Sobic003G382500--Sobic009G138700 Sobic003G382500--Sobic008G098600 Sobic003G382500--Sobic006G084000 Sobic003G407600 Sobic003G407600 Sobic003G382500--Sobic003G407600 Sobic001G017700 Sobic001G017700 Sobic003G382500--Sobic001G017700 Sobic003G287100 Sobic003G287100 Sobic003G382500--Sobic003G287100 Sobic003G382500--Sobic007G112600 Sobic003G382500--Sobic010G007100 Sobic008G009600 Sobic008G009600 Sobic003G382500--Sobic008G009600
Octagon: transcription factors


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