Gene annotation
Transcriptome id Sobic.007G094500.1
Synonym
Functional annotation KH domain containing protein, putative, expressed
UniProt A0A1B6PGM6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08620 : RNA-binding KH domain-containing protein
RAP-DB (Rice) LOC_Os05g40290.1 : KH domain-containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G119400 ATP-binding domain-containing protein, putative, expressed -
2 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
3 Sobic.004G354000 OsSigP1 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed -
4 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
5 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
6 Sobic.010G224700 - K17680: twinkle protein
7 Sobic.006G245900 FAR1 family protein, expressed -
8 Sobic.002G431400 - -
9 Sobic.002G048700 BT1 family protein, putative, expressed -
10 Sobic.009G142000 plus-3 domain containing protein, putative, expressed -
11 Sobic.006G140400 DNA mismatch repair protein, putative, expressed -
12 Sobic.004G007900 SNF2 family N-terminal domain containing protein, expressed K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
13 Sobic.003G070100 expressed protein -
14 Sobic.001G482200 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
15 Sobic.006G274100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
16 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
17 Sobic.003G309050 - -
18 Sobic.003G311600 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
19 Sobic.002G127200 CRAL/TRIO domain containing protein, expressed -
20 Sobic.006G112700 ATPOT1, putative, expressed -


Gene co-expression network
sample Sobic007G094500 Sobic007G094500 Sobic004G119400 Sobic004G119400 Sobic007G094500--Sobic004G119400 Sobic008G017100 Sobic008G017100 Sobic007G094500--Sobic008G017100 Sobic004G354000 Sobic004G354000 Sobic007G094500--Sobic004G354000 Sobic002G380100 Sobic002G380100 Sobic007G094500--Sobic002G380100 Sobic002G079100 Sobic002G079100 Sobic007G094500--Sobic002G079100 Sobic010G224700 Sobic010G224700 Sobic007G094500--Sobic010G224700 Sobic006G245900 Sobic006G245900 Sobic007G094500--Sobic006G245900 Sobic002G431400 Sobic002G431400 Sobic007G094500--Sobic002G431400 Sobic002G048700 Sobic002G048700 Sobic007G094500--Sobic002G048700 Sobic004G119400--Sobic008G017100 Sobic004G119400--Sobic010G224700 Sobic006G269800 Sobic006G269800 Sobic004G119400--Sobic006G269800 Sobic004G119400--Sobic007G094500 Sobic004G119400--Sobic002G380100 Sobic001G429600 Sobic001G429600 Sobic004G119400--Sobic001G429600 Sobic002G309200 Sobic002G309200 Sobic004G119400--Sobic002G309200 Sobic003G070100 Sobic003G070100 Sobic004G119400--Sobic003G070100 Sobic001G540800 Sobic001G540800 Sobic004G119400--Sobic001G540800 Sobic008G017100--Sobic004G119400 Sobic008G017100--Sobic006G269800 Sobic008G017100--Sobic010G224700 Sobic006G185200 Sobic006G185200 Sobic008G017100--Sobic006G185200 Sobic008G017100--Sobic002G079100 Sobic002G378100 Sobic002G378100 Sobic008G017100--Sobic002G378100 Sobic004G351800 Sobic004G351800 Sobic008G017100--Sobic004G351800 Sobic007G171100 Sobic007G171100 Sobic008G017100--Sobic007G171100 Sobic008G147200 Sobic008G147200 Sobic008G017100--Sobic008G147200 Sobic006G208400 Sobic006G208400 Sobic004G354000--Sobic006G208400 Sobic004G342300 Sobic004G342300 Sobic004G354000--Sobic004G342300 Sobic004G354000--Sobic008G017100 Sobic002G356600 Sobic002G356600 Sobic004G354000--Sobic002G356600 Sobic001G322600 Sobic001G322600 Sobic004G354000--Sobic001G322600 Sobic004G354000--Sobic002G079100 Sobic004G356200 Sobic004G356200 Sobic004G354000--Sobic004G356200 Sobic001G027100 Sobic001G027100 Sobic004G354000--Sobic001G027100 Sobic006G236000 Sobic006G236000 Sobic004G354000--Sobic006G236000 Sobic002G380100--Sobic002G079100 Sobic002G380100--Sobic004G119400 Sobic002G380100--Sobic008G017100 Sobic006G111200 Sobic006G111200 Sobic002G380100--Sobic006G111200 Sobic001G448100 Sobic001G448100 Sobic002G380100--Sobic001G448100 Sobic003G185250 Sobic003G185250 Sobic002G380100--Sobic003G185250 Sobic002G380100--Sobic003G070100 Sobic010G050700 Sobic010G050700 Sobic002G380100--Sobic010G050700 Sobic009G096100 Sobic009G096100 Sobic002G380100--Sobic009G096100 Sobic003G124600 Sobic003G124600 Sobic002G079100--Sobic003G124600 Sobic002G079100--Sobic001G448100 Sobic002G079100--Sobic008G017100 Sobic008G080500 Sobic008G080500 Sobic002G079100--Sobic008G080500 Sobic002G079100--Sobic002G380100 Sobic002G292800 Sobic002G292800 Sobic002G079100--Sobic002G292800 Sobic010G278600 Sobic010G278600 Sobic002G079100--Sobic010G278600 Sobic002G079100--Sobic006G245900 Sobic001G482200 Sobic001G482200 Sobic002G079100--Sobic001G482200 Sobic010G224700--Sobic002G378100 Sobic010G224700--Sobic008G017100 Sobic004G027300 Sobic004G027300 Sobic010G224700--Sobic004G027300 Sobic001G119600 Sobic001G119600 Sobic010G224700--Sobic001G119600 Sobic003G123200 Sobic003G123200 Sobic010G224700--Sobic003G123200 Sobic008G163500 Sobic008G163500 Sobic010G224700--Sobic008G163500 Sobic001G049800 Sobic001G049800 Sobic010G224700--Sobic001G049800 Sobic003G425100 Sobic003G425100 Sobic010G224700--Sobic003G425100 Sobic003G199300 Sobic003G199300 Sobic010G224700--Sobic003G199300 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic004G107200 Sobic004G107200 Sobic002G431400--Sobic004G107200 Sobic007G210000 Sobic007G210000 Sobic002G431400--Sobic007G210000 Sobic008G092532 Sobic008G092532 Sobic002G431400--Sobic008G092532 Sobic010G172000 Sobic010G172000 Sobic002G431400--Sobic010G172000 Sobic002G431400--Sobic001G540800 Sobic002G431400--Sobic002G309200 Sobic002G425500 Sobic002G425500 Sobic002G431400--Sobic002G425500 Sobic002G197300 Sobic002G197300 Sobic002G431400--Sobic002G197300 Sobic002G431400--Sobic006G269800 Sobic006G261400 Sobic006G261400 Sobic002G048700--Sobic006G261400 Sobic006G267600 Sobic006G267600 Sobic002G048700--Sobic006G267600 Sobic001G051700 Sobic001G051700 Sobic002G048700--Sobic001G051700 Sobic003G416700 Sobic003G416700 Sobic002G048700--Sobic003G416700 Sobic004G040200 Sobic004G040200 Sobic002G048700--Sobic004G040200 Sobic002G048700--Sobic002G425500 Sobic001G111600 Sobic001G111600 Sobic002G048700--Sobic001G111600 Sobic007G183900 Sobic007G183900 Sobic002G048700--Sobic007G183900 Sobic008G002500 Sobic008G002500 Sobic002G048700--Sobic008G002500
Octagon: transcription factors


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