Gene annotation
Transcriptome id Sobic.006G072501.1
Synonym -
Functional annotation -
UniProt A0A1Z5RCR5
Pfam PF06258
Panther DB PTHR33986 PTHR33986:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22350 : Protein of unknown function (DUF1022)
RAP-DB (Rice) LOC_Os02g33230.1 : nucleoside-diphosphate-sugar epimerase, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT61041 , PNT61040 , KQJ82530 , KQJ82531 , KQJ82532
Barley -
Wheat TraesCS2D02G293700 , TraesCS2D02G293700 , TraesCS2A02G295800 , TraesCS2A02G295800 , TraesCS2B02G312100 , TraesCS2B02G312100 , TraesCS2B02G312100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G149100 vegetative storage protein, putative, expressed -
2 Sobic.001G347100 tetratricopeptide-like helical, putative, expressed -
3 Sobic.006G069100 pentatricopeptide, putative, expressed -
4 Sobic.006G109400 pentatricopeptide, putative, expressed -
5 Sobic.001G097400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphatidylinositol kinase, putative, expressed -
6 Sobic.008G125100 Mur ligase family protein, putative, expressed -
7 Sobic.009G122900 alpha 1,3-xylosyltransferase, putative, expressed K11714: rhamnogalacturonan II specific xylosyltransferase
8 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
9 Sobic.001G256500 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
11 Sobic.003G299200 pentatricopeptide, putative, expressed -
12 Sobic.005G011000 Rf1, mitochondrial precursor, putative, expressed -
13 Sobic.009G116400 pentatricopeptide, putative, expressed -
14 Sobic.004G241000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
15 Sobic.004G135500 - -
16 Sobic.001G081300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
17 Sobic.001G242300 expressed protein -
18 Sobic.001G212200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LOI1, putative, expressed -
19 Sobic.007G123100 PPR repeat domain containing protein, putative, expressed -
20 Sobic.005G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized PPR-repeat protein, putative, expressed -


Gene co-expression network
sample Sobic006G072501 Sobic006G072501 Sobic001G149100 Sobic001G149100 Sobic006G072501--Sobic001G149100 Sobic001G347100 Sobic001G347100 Sobic006G072501--Sobic001G347100 Sobic006G069100 Sobic006G069100 Sobic006G072501--Sobic006G069100 Sobic006G109400 Sobic006G109400 Sobic006G072501--Sobic006G109400 Sobic001G097400 Sobic001G097400 Sobic006G072501--Sobic001G097400 Sobic008G125100 Sobic008G125100 Sobic006G072501--Sobic008G125100 Sobic009G122900 Sobic009G122900 Sobic006G072501--Sobic009G122900 Sobic003G259600 Sobic003G259600 Sobic006G072501--Sobic003G259600 Sobic001G256500 Sobic001G256500 Sobic006G072501--Sobic001G256500 Sobic001G149100--Sobic001G347100 Sobic003G299200 Sobic003G299200 Sobic001G149100--Sobic003G299200 Sobic010G252700 Sobic010G252700 Sobic001G149100--Sobic010G252700 Sobic008G179000 Sobic008G179000 Sobic001G149100--Sobic008G179000 Sobic004G241000 Sobic004G241000 Sobic001G149100--Sobic004G241000 Sobic008G163400 Sobic008G163400 Sobic001G149100--Sobic008G163400 Sobic003G239000 Sobic003G239000 Sobic001G149100--Sobic003G239000 Sobic001G149100--Sobic006G069100 Sobic002G267600 Sobic002G267600 Sobic001G149100--Sobic002G267600 Sobic001G347100--Sobic001G149100 Sobic001G391101 Sobic001G391101 Sobic001G347100--Sobic001G391101 Sobic001G081300 Sobic001G081300 Sobic001G347100--Sobic001G081300 Sobic009G238700 Sobic009G238700 Sobic001G347100--Sobic009G238700 Sobic007G179600 Sobic007G179600 Sobic001G347100--Sobic007G179600 Sobic001G347100--Sobic003G299200 Sobic001G347100--Sobic004G241000 Sobic001G347100--Sobic006G069100 Sobic009G155400 Sobic009G155400 Sobic001G347100--Sobic009G155400 Sobic006G069100--Sobic004G241000 Sobic004G256900 Sobic004G256900 Sobic006G069100--Sobic004G256900 Sobic010G068900 Sobic010G068900 Sobic006G069100--Sobic010G068900 Sobic010G190900 Sobic010G190900 Sobic006G069100--Sobic010G190900 Sobic006G085900 Sobic006G085900 Sobic006G069100--Sobic006G085900 Sobic006G069100--Sobic009G155400 Sobic006G069100--Sobic008G163400 Sobic009G116400 Sobic009G116400 Sobic006G069100--Sobic009G116400 Sobic004G025100 Sobic004G025100 Sobic006G069100--Sobic004G025100 Sobic007G030000 Sobic007G030000 Sobic006G109400--Sobic007G030000 Sobic006G109400--Sobic001G347100 Sobic008G099900 Sobic008G099900 Sobic006G109400--Sobic008G099900 Sobic006G109400--Sobic006G069100 Sobic001G408300 Sobic001G408300 Sobic006G109400--Sobic001G408300 Sobic010G038800 Sobic010G038800 Sobic006G109400--Sobic010G038800 Sobic010G277200 Sobic010G277200 Sobic006G109400--Sobic010G277200 Sobic006G109400--Sobic009G155400 Sobic005G210700 Sobic005G210700 Sobic006G109400--Sobic005G210700 Sobic001G235700 Sobic001G235700 Sobic001G097400--Sobic001G235700 Sobic001G436300 Sobic001G436300 Sobic001G097400--Sobic001G436300 Sobic005G088900 Sobic005G088900 Sobic001G097400--Sobic005G088900 Sobic006G127500 Sobic006G127500 Sobic001G097400--Sobic006G127500 Sobic002G110500 Sobic002G110500 Sobic001G097400--Sobic002G110500 Sobic003G098200 Sobic003G098200 Sobic001G097400--Sobic003G098200 Sobic003G432300 Sobic003G432300 Sobic001G097400--Sobic003G432300 Sobic001G097400--Sobic001G149100 Sobic006G251600 Sobic006G251600 Sobic001G097400--Sobic006G251600 Sobic008G125100--Sobic009G122900 Sobic001G315400 Sobic001G315400 Sobic008G125100--Sobic001G315400 Sobic007G000400 Sobic007G000400 Sobic008G125100--Sobic007G000400 Sobic004G128200 Sobic004G128200 Sobic008G125100--Sobic004G128200 Sobic001G236800 Sobic001G236800 Sobic008G125100--Sobic001G236800 Sobic003G304800 Sobic003G304800 Sobic008G125100--Sobic003G304800 Sobic007G172600 Sobic007G172600 Sobic008G125100--Sobic007G172600 Sobic004G178400 Sobic004G178400 Sobic008G125100--Sobic004G178400 Sobic002G380100 Sobic002G380100 Sobic008G125100--Sobic002G380100 Sobic009G122900--Sobic003G304800 Sobic003G331000 Sobic003G331000 Sobic009G122900--Sobic003G331000 Sobic009G122900--Sobic008G125100 Sobic001G242300 Sobic001G242300 Sobic009G122900--Sobic001G242300 Sobic003G028400 Sobic003G028400 Sobic009G122900--Sobic003G028400 Sobic001G296800 Sobic001G296800 Sobic009G122900--Sobic001G296800 Sobic003G298900 Sobic003G298900 Sobic009G122900--Sobic003G298900 Sobic005G064100 Sobic005G064100 Sobic009G122900--Sobic005G064100 Sobic005G160200 Sobic005G160200 Sobic009G122900--Sobic005G160200 Sobic003G361400 Sobic003G361400 Sobic003G259600--Sobic003G361400 Sobic003G360300 Sobic003G360300 Sobic003G259600--Sobic003G360300 Sobic001G373000 Sobic001G373000 Sobic003G259600--Sobic001G373000 Sobic003G259600--Sobic003G331000 Sobic004G038100 Sobic004G038100 Sobic003G259600--Sobic004G038100 Sobic010G269300 Sobic010G269300 Sobic003G259600--Sobic010G269300 Sobic003G259600--Sobic003G028400 Sobic002G142700 Sobic002G142700 Sobic003G259600--Sobic002G142700 Sobic001G334100 Sobic001G334100 Sobic003G259600--Sobic001G334100 Sobic001G256500--Sobic006G072501 Sobic004G135500 Sobic004G135500 Sobic001G256500--Sobic004G135500 Sobic003G415600 Sobic003G415600 Sobic001G256500--Sobic003G415600 Sobic001G256500--Sobic002G110500 Sobic001G256500--Sobic001G347100 Sobic003G282800 Sobic003G282800 Sobic001G256500--Sobic003G282800 Sobic001G256500--Sobic005G088900 Sobic009G205400 Sobic009G205400 Sobic001G256500--Sobic009G205400 Sobic001G256500--Sobic006G109400
Octagon: transcription factors


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