Gene annotation
Transcriptome id Sobic.004G109750.1
Synonym -
Functional annotation -
UniProt A0A1Z5RM04
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G361200 expressed protein -
2 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
3 Sobic.002G192900 expressed protein -
4 Sobic.001G323400 expressed protein -
5 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
6 Sobic.006G095000 PPR repeat domain containing protein, putative, expressed -
7 Sobic.008G022500 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
9 Sobic.004G328300 expressed protein -
10 Sobic.004G053900 expressed protein -
11 Sobic.001G154300 DNA binding protein, putative, expressed -
12 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
13 Sobic.003G184300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.008G148500 expressed protein -
15 Sobic.003G159700 ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
16 Sobic.004G336300 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
17 Sobic.005G204700 polygalacturonase, putative, expressed -
18 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
19 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
20 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase


Gene co-expression network
sample Sobic004G109750 Sobic004G109750 Sobic001G361200 Sobic001G361200 Sobic004G109750--Sobic001G361200 Sobic010G042600 Sobic010G042600 Sobic004G109750--Sobic010G042600 Sobic002G192900 Sobic002G192900 Sobic004G109750--Sobic002G192900 Sobic001G323400 Sobic001G323400 Sobic004G109750--Sobic001G323400 Sobic003G315700 Sobic003G315700 Sobic004G109750--Sobic003G315700 Sobic006G095000 Sobic006G095000 Sobic004G109750--Sobic006G095000 Sobic008G022500 Sobic008G022500 Sobic004G109750--Sobic008G022500 Sobic007G173000 Sobic007G173000 Sobic004G109750--Sobic007G173000 Sobic004G328300 Sobic004G328300 Sobic004G109750--Sobic004G328300 Sobic001G361200--Sobic002G192900 Sobic001G154300 Sobic001G154300 Sobic001G361200--Sobic001G154300 Sobic003G184300 Sobic003G184300 Sobic001G361200--Sobic003G184300 Sobic001G361200--Sobic004G328300 Sobic001G296800 Sobic001G296800 Sobic001G361200--Sobic001G296800 Sobic001G361200--Sobic003G315700 Sobic001G361200--Sobic006G095000 Sobic003G411700 Sobic003G411700 Sobic001G361200--Sobic003G411700 Sobic004G306100 Sobic004G306100 Sobic001G361200--Sobic004G306100 Sobic003G118100 Sobic003G118100 Sobic010G042600--Sobic003G118100 Sobic009G206500 Sobic009G206500 Sobic010G042600--Sobic009G206500 Sobic001G144200 Sobic001G144200 Sobic010G042600--Sobic001G144200 Sobic006G267500 Sobic006G267500 Sobic010G042600--Sobic006G267500 Sobic003G266400 Sobic003G266400 Sobic010G042600--Sobic003G266400 Sobic010G018500 Sobic010G018500 Sobic010G042600--Sobic010G018500 Sobic001G196000 Sobic001G196000 Sobic010G042600--Sobic001G196000 Sobic006G035600 Sobic006G035600 Sobic010G042600--Sobic006G035600 Sobic001G500400 Sobic001G500400 Sobic010G042600--Sobic001G500400 Sobic002G308000 Sobic002G308000 Sobic002G192900--Sobic002G308000 Sobic010G188900 Sobic010G188900 Sobic002G192900--Sobic010G188900 Sobic002G192900--Sobic006G095000 Sobic002G192900--Sobic001G361200 Sobic002G390800 Sobic002G390800 Sobic002G192900--Sobic002G390800 Sobic002G192900--Sobic003G184300 Sobic004G064600 Sobic004G064600 Sobic002G192900--Sobic004G064600 Sobic002G192900--Sobic001G323400 Sobic001G248400 Sobic001G248400 Sobic002G192900--Sobic001G248400 Sobic001G126800 Sobic001G126800 Sobic001G323400--Sobic001G126800 Sobic003G159700 Sobic003G159700 Sobic001G323400--Sobic003G159700 Sobic001G323400--Sobic006G095000 Sobic001G323400--Sobic002G308000 Sobic001G323400--Sobic002G192900 Sobic001G323400--Sobic004G064600 Sobic010G269800 Sobic010G269800 Sobic001G323400--Sobic010G269800 Sobic001G323400--Sobic002G390800 Sobic001G011000 Sobic001G011000 Sobic001G323400--Sobic001G011000 Sobic008G148000 Sobic008G148000 Sobic003G315700--Sobic008G148000 Sobic006G193100 Sobic006G193100 Sobic003G315700--Sobic006G193100 Sobic003G315700--Sobic004G306100 Sobic002G290000 Sobic002G290000 Sobic003G315700--Sobic002G290000 Sobic009G202801 Sobic009G202801 Sobic003G315700--Sobic009G202801 Sobic003G315700--Sobic004G328300 Sobic003G409600 Sobic003G409600 Sobic003G315700--Sobic003G409600 Sobic002G113400 Sobic002G113400 Sobic003G315700--Sobic002G113400 Sobic009G052100 Sobic009G052100 Sobic003G315700--Sobic009G052100 Sobic006G095000--Sobic003G184300 Sobic006G095000--Sobic002G192900 Sobic006G095000--Sobic004G064600 Sobic008G047500 Sobic008G047500 Sobic006G095000--Sobic008G047500 Sobic004G215600 Sobic004G215600 Sobic006G095000--Sobic004G215600 Sobic006G095000--Sobic001G323400 Sobic006G095000--Sobic002G308000 Sobic003G045000 Sobic003G045000 Sobic006G095000--Sobic003G045000 Sobic009G120400 Sobic009G120400 Sobic006G095000--Sobic009G120400 Sobic008G022500--Sobic004G328300 Sobic008G022500--Sobic002G290000 Sobic004G053900 Sobic004G053900 Sobic008G022500--Sobic004G053900 Sobic006G029300 Sobic006G029300 Sobic008G022500--Sobic006G029300 Sobic010G008900 Sobic010G008900 Sobic008G022500--Sobic010G008900 Sobic008G022500--Sobic003G315700 Sobic005G055600 Sobic005G055600 Sobic008G022500--Sobic005G055600 Sobic010G147700 Sobic010G147700 Sobic008G022500--Sobic010G147700 Sobic001G013400 Sobic001G013400 Sobic008G022500--Sobic001G013400 Sobic006G071628 Sobic006G071628 Sobic007G173000--Sobic006G071628 Sobic001G051300 Sobic001G051300 Sobic007G173000--Sobic001G051300 Sobic007G173000--Sobic001G196000 Sobic007G139500 Sobic007G139500 Sobic007G173000--Sobic007G139500 Sobic005G129201 Sobic005G129201 Sobic007G173000--Sobic005G129201 Sobic002G232400 Sobic002G232400 Sobic007G173000--Sobic002G232400 Sobic009G061000 Sobic009G061000 Sobic007G173000--Sobic009G061000 Sobic002G370400 Sobic002G370400 Sobic007G173000--Sobic002G370400 Sobic009G256700 Sobic009G256700 Sobic007G173000--Sobic009G256700 Sobic004G328300--Sobic005G055600 Sobic004G328300--Sobic006G193100 Sobic004G328300--Sobic003G315700 Sobic004G328300--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic004G328300--Sobic001G025900 Sobic001G023500 Sobic001G023500 Sobic004G328300--Sobic001G023500 Sobic004G328300--Sobic001G154300 Sobic004G328300--Sobic009G202801 Sobic004G328300--Sobic002G113400
Octagon: transcription factors


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