Gene annotation
Transcriptome id Sobic.009G034300.1
Synonym Sb09g002910
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transferase family protein, putative, expressed
UniProt C5YZK0
Pfam PF02458
Panther DB PTHR31147 PTHR31147:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT3G62160 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os05g04584.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a055332
Brachypodium KQK07668
Barley HORVU1Hr1G017410.3 , HORVU1Hr1G017410.1 , HORVU1Hr1G017410.2
Wheat TraesCS1D02G082800 , TraesCS1A02G081200 , TraesCS1B02G098800
Populus -


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cDNA sequences
Sobic.009G034300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G360800 cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
2 Sobic.004G221300 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
3 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
4 Sobic.003G410800 exostosin family domain containing protein, expressed -
5 Sobic.002G203900 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
6 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
8 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
9 Sobic.010G180100 transferase family protein, putative, expressed -
10 Sobic.002G207200 - -
11 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
12 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
13 Sobic.004G111100 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
15 Sobic.002G218900 plant viral response family protein, putative, expressed -
16 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
17 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
19 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
20 Sobic.002G368600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase


Gene co-expression network
sample Sobic009G034300 Sobic009G034300 Sobic001G360800 Sobic001G360800 Sobic009G034300--Sobic001G360800 Sobic004G221300 Sobic004G221300 Sobic009G034300--Sobic004G221300 Sobic001G224300 Sobic001G224300 Sobic009G034300--Sobic001G224300 Sobic003G410800 Sobic003G410800 Sobic009G034300--Sobic003G410800 Sobic002G203900 Sobic002G203900 Sobic009G034300--Sobic002G203900 Sobic006G036400 Sobic006G036400 Sobic009G034300--Sobic006G036400 Sobic002G167600 Sobic002G167600 Sobic009G034300--Sobic002G167600 Sobic001G409100 Sobic001G409100 Sobic009G034300--Sobic001G409100 Sobic010G180100 Sobic010G180100 Sobic009G034300--Sobic010G180100 Sobic001G360800--Sobic004G221300 Sobic001G360800--Sobic009G034300 Sobic001G360800--Sobic002G203900 Sobic001G360800--Sobic002G167600 Sobic001G360800--Sobic006G036400 Sobic001G360800--Sobic001G409100 Sobic001G360800--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic001G360800--Sobic003G296400 Sobic002G207200 Sobic002G207200 Sobic001G360800--Sobic002G207200 Sobic004G221300--Sobic001G360800 Sobic004G221300--Sobic009G034300 Sobic004G221300--Sobic001G409100 Sobic004G221300--Sobic003G410800 Sobic004G221300--Sobic003G296400 Sobic008G110200 Sobic008G110200 Sobic004G221300--Sobic008G110200 Sobic004G221300--Sobic001G224300 Sobic009G220100 Sobic009G220100 Sobic004G221300--Sobic009G220100 Sobic004G221300--Sobic006G036400 Sobic001G224300--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic001G224300--Sobic002G205500 Sobic001G224300--Sobic006G036400 Sobic003G387500 Sobic003G387500 Sobic001G224300--Sobic003G387500 Sobic009G226900 Sobic009G226900 Sobic001G224300--Sobic009G226900 Sobic007G223600 Sobic007G223600 Sobic001G224300--Sobic007G223600 Sobic001G224300--Sobic009G034300 Sobic001G224300--Sobic004G221300 Sobic001G224300--Sobic001G409100 Sobic003G410800--Sobic009G220100 Sobic003G410800--Sobic001G409100 Sobic001G418100 Sobic001G418100 Sobic003G410800--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic003G410800--Sobic002G396400 Sobic002G154600 Sobic002G154600 Sobic003G410800--Sobic002G154600 Sobic003G410800--Sobic004G221300 Sobic003G410800--Sobic009G034300 Sobic002G128800 Sobic002G128800 Sobic003G410800--Sobic002G128800 Sobic010G052200 Sobic010G052200 Sobic003G410800--Sobic010G052200 Sobic001G360700 Sobic001G360700 Sobic002G203900--Sobic001G360700 Sobic002G203900--Sobic002G167600 Sobic004G047600 Sobic004G047600 Sobic002G203900--Sobic004G047600 Sobic007G090472 Sobic007G090472 Sobic002G203900--Sobic007G090472 Sobic002G146000 Sobic002G146000 Sobic002G203900--Sobic002G146000 Sobic006G135300 Sobic006G135300 Sobic002G203900--Sobic006G135300 Sobic007G047300 Sobic007G047300 Sobic002G203900--Sobic007G047300 Sobic002G203900--Sobic001G360800 Sobic007G073000 Sobic007G073000 Sobic002G203900--Sobic007G073000 Sobic006G036400--Sobic001G224300 Sobic006G036400--Sobic003G296400 Sobic003G062000 Sobic003G062000 Sobic006G036400--Sobic003G062000 Sobic006G036400--Sobic002G205500 Sobic006G036400--Sobic001G409100 Sobic006G036400--Sobic009G034300 Sobic006G036400--Sobic009G226900 Sobic006G036400--Sobic001G360800 Sobic006G036400--Sobic004G221300 Sobic002G167600--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic001G406700 Sobic001G406700 Sobic002G167600--Sobic001G406700 Sobic002G167600--Sobic002G203900 Sobic009G170500 Sobic009G170500 Sobic002G167600--Sobic009G170500 Sobic002G254900 Sobic002G254900 Sobic002G167600--Sobic002G254900 Sobic001G072600 Sobic001G072600 Sobic002G167600--Sobic001G072600 Sobic002G167600--Sobic010G180100 Sobic001G409100--Sobic002G396400 Sobic001G409100--Sobic003G410800 Sobic001G409100--Sobic004G221300 Sobic001G409100--Sobic006G036400 Sobic001G409100--Sobic001G418100 Sobic001G409100--Sobic001G224300 Sobic001G038300 Sobic001G038300 Sobic001G409100--Sobic001G038300 Sobic001G409100--Sobic010G180100 Sobic001G409100--Sobic009G220100 Sobic010G131400 Sobic010G131400 Sobic010G180100--Sobic010G131400 Sobic010G180100--Sobic002G254900 Sobic010G180100--Sobic002G167600 Sobic010G180100--Sobic001G360700 Sobic001G002800 Sobic001G002800 Sobic010G180100--Sobic001G002800 Sobic010G180100--Sobic001G224300 Sobic010G180100--Sobic001G409100 Sobic010G180100--Sobic004G047600 Sobic010G180100--Sobic003G387500
Octagon: transcription factors


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