Gene annotation
Transcriptome id Sobic.002G207200.1
Synonym Sb02g025170
Functional annotation -
UniProt A0A1B6QCN7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a047073
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
2 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
3 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
4 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.002G218900 plant viral response family protein, putative, expressed -
6 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
7 Sobic.001G460400 expressed protein -
8 Sobic.004G111100 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.009G034300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
10 Sobic.001G072600 expressed protein -
11 Sobic.002G203900 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
12 Sobic.001G360800 cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
13 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
14 Sobic.007G119500 expressed protein -
15 Sobic.009G162300 similar to Putative laccase-11(PubMedID : 29862293)@Laccase LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
16 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
17 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
18 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
19 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
20 Sobic.006G160900 NAC domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G207200 Sobic002G207200 Sobic007G047300 Sobic007G047300 Sobic002G207200--Sobic007G047300 Sobic004G047600 Sobic004G047600 Sobic002G207200--Sobic004G047600 Sobic001G360700 Sobic001G360700 Sobic002G207200--Sobic001G360700 Sobic003G352700 Sobic003G352700 Sobic002G207200--Sobic003G352700 Sobic002G218900 Sobic002G218900 Sobic002G207200--Sobic002G218900 Sobic002G167600 Sobic002G167600 Sobic002G207200--Sobic002G167600 Sobic001G460400 Sobic001G460400 Sobic002G207200--Sobic001G460400 Sobic004G111100 Sobic004G111100 Sobic002G207200--Sobic004G111100 Sobic009G034300 Sobic009G034300 Sobic002G207200--Sobic009G034300 Sobic007G047300--Sobic001G360700 Sobic007G047300--Sobic004G047600 Sobic009G162300 Sobic009G162300 Sobic007G047300--Sobic009G162300 Sobic007G047300--Sobic003G352700 Sobic001G471800 Sobic001G471800 Sobic007G047300--Sobic001G471800 Sobic007G047300--Sobic004G111100 Sobic002G146000 Sobic002G146000 Sobic007G047300--Sobic002G146000 Sobic007G047300--Sobic002G207200 Sobic002G203900 Sobic002G203900 Sobic007G047300--Sobic002G203900 Sobic004G047600--Sobic001G360700 Sobic004G047600--Sobic003G352700 Sobic004G047600--Sobic007G047300 Sobic004G047600--Sobic001G471800 Sobic004G047600--Sobic002G146000 Sobic004G047600--Sobic002G167600 Sobic002G254900 Sobic002G254900 Sobic004G047600--Sobic002G254900 Sobic004G047600--Sobic002G203900 Sobic004G047600--Sobic009G162300 Sobic001G360700--Sobic004G047600 Sobic001G360700--Sobic007G047300 Sobic001G360700--Sobic002G167600 Sobic001G360700--Sobic002G203900 Sobic001G360700--Sobic001G471800 Sobic001G360700--Sobic002G254900 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G072600 Sobic001G072600 Sobic001G360700--Sobic001G072600 Sobic003G082700 Sobic003G082700 Sobic003G352700--Sobic003G082700 Sobic003G352700--Sobic004G047600 Sobic009G008800 Sobic009G008800 Sobic003G352700--Sobic009G008800 Sobic003G239100 Sobic003G239100 Sobic003G352700--Sobic003G239100 Sobic001G068500 Sobic001G068500 Sobic003G352700--Sobic001G068500 Sobic001G484000 Sobic001G484000 Sobic003G352700--Sobic001G484000 Sobic001G059500 Sobic001G059500 Sobic003G352700--Sobic001G059500 Sobic005G127200 Sobic005G127200 Sobic003G352700--Sobic005G127200 Sobic003G352700--Sobic007G047300 Sobic002G218900--Sobic001G072600 Sobic002G218900--Sobic004G047600 Sobic002G218900--Sobic001G360700 Sobic002G218900--Sobic002G207200 Sobic002G218900--Sobic003G352700 Sobic002G218900--Sobic007G047300 Sobic001G406700 Sobic001G406700 Sobic002G218900--Sobic001G406700 Sobic006G144600 Sobic006G144600 Sobic002G218900--Sobic006G144600 Sobic007G119500 Sobic007G119500 Sobic002G218900--Sobic007G119500 Sobic002G167600--Sobic001G360700 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G167600--Sobic002G203900 Sobic009G170500 Sobic009G170500 Sobic002G167600--Sobic009G170500 Sobic002G167600--Sobic002G254900 Sobic002G167600--Sobic001G072600 Sobic010G180100 Sobic010G180100 Sobic002G167600--Sobic010G180100 Sobic001G460400--Sobic001G360700 Sobic001G067800 Sobic001G067800 Sobic001G460400--Sobic001G067800 Sobic004G161900 Sobic004G161900 Sobic001G460400--Sobic004G161900 Sobic003G017601 Sobic003G017601 Sobic001G460400--Sobic003G017601 Sobic001G460400--Sobic002G207200 Sobic001G227850 Sobic001G227850 Sobic001G460400--Sobic001G227850 Sobic009G246700 Sobic009G246700 Sobic001G460400--Sobic009G246700 Sobic008G037900 Sobic008G037900 Sobic001G460400--Sobic008G037900 Sobic010G218300 Sobic010G218300 Sobic001G460400--Sobic010G218300 Sobic010G101900 Sobic010G101900 Sobic004G111100--Sobic010G101900 Sobic004G111100--Sobic007G047300 Sobic003G254700 Sobic003G254700 Sobic004G111100--Sobic003G254700 Sobic004G111100--Sobic009G162300 Sobic003G227700 Sobic003G227700 Sobic004G111100--Sobic003G227700 Sobic004G111100--Sobic001G360700 Sobic004G111100--Sobic002G207200 Sobic004G111100--Sobic001G072600 Sobic004G111100--Sobic009G034300 Sobic001G360800 Sobic001G360800 Sobic009G034300--Sobic001G360800 Sobic004G221300 Sobic004G221300 Sobic009G034300--Sobic004G221300 Sobic001G224300 Sobic001G224300 Sobic009G034300--Sobic001G224300 Sobic003G410800 Sobic003G410800 Sobic009G034300--Sobic003G410800 Sobic009G034300--Sobic002G203900 Sobic006G036400 Sobic006G036400 Sobic009G034300--Sobic006G036400 Sobic009G034300--Sobic002G167600 Sobic001G409100 Sobic001G409100 Sobic009G034300--Sobic001G409100 Sobic009G034300--Sobic010G180100
Octagon: transcription factors


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