Gene annotation
Transcriptome id Sobic.008G176800.3,Sobic.008G176800.4,Sobic.008G176800.5
Synonym Sb08g022070
Functional annotation expressed protein
UniProt A0A1B6PEA8
Pfam -
Panther DB PTHR12972
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54750 : -
RAP-DB (Rice) LOC_Os12g42700.1 : expressed protein
MaizeGDB (Corn) Zm00025a004757
Brachypodium KQK11082 , KQK11023 , KQJ85724 , KQJ85722 , KQJ85723 , PNT62298
Barley HORVU3Hr1G076880.12 , HORVU3Hr1G076880.13 , HORVU3Hr1G076880.10 , HORVU3Hr1G076880.11 , HORVU3Hr1G076880.16 , HORVU3Hr1G076880.17 , HORVU3Hr1G076880.15 , HORVU3Hr1G076880.18 , HORVU3Hr1G076880.19 , HORVU3Hr1G076880.8 , HORVU3Hr1G076880.9 , HORVU3Hr1G076880.1 , HORVU3Hr1G076880.2 , HORVU3Hr1G076880.3 , HORVU3Hr1G076880.4 , HORVU3Hr1G076880.5 , HORVU3Hr1G076880.6 , HORVU3Hr1G076880.7 , HORVU3Hr1G076880.21 , HORVU3Hr1G076880.20
Wheat TraesCS3D02G314600 , TraesCS5D02G032900 , TraesCS3A02G316600 , TraesCS3A02G316600 , TraesCS5B02G024300 , TraesCS5B02G024300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
2 Sobic.007G053400 nuclear matrix protein 1, putative, expressed -
3 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.009G255900 "Expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@similar to Putative uncharacterized protein(PubMedID : 29862293)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
5 Sobic.007G009000 expressed protein -
6 Sobic.010G217100 ubiquitin-conjugating enzyme, putative, expressed K10583: UBE2S, ubiquitin-conjugating enzyme E2 S
7 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
8 Sobic.004G031800 expressed protein -
9 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
10 Sobic.001G348000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
11 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
12 Sobic.004G164000 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
13 Sobic.010G144900 fiber protein Fb34, putative, expressed -
14 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
15 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
16 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
17 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
18 Sobic.007G201000 methyltransferase domain containing protein, expressed -
19 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
20 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7


Gene co-expression network
sample Sobic008G176800 Sobic008G176800 Sobic007G048700 Sobic007G048700 Sobic008G176800--Sobic007G048700 Sobic007G053400 Sobic007G053400 Sobic008G176800--Sobic007G053400 Sobic006G029400 Sobic006G029400 Sobic008G176800--Sobic006G029400 Sobic009G255900 Sobic009G255900 Sobic008G176800--Sobic009G255900 Sobic007G009000 Sobic007G009000 Sobic008G176800--Sobic007G009000 Sobic010G217100 Sobic010G217100 Sobic008G176800--Sobic010G217100 Sobic001G013200 Sobic001G013200 Sobic008G176800--Sobic001G013200 Sobic004G031800 Sobic004G031800 Sobic008G176800--Sobic004G031800 Sobic001G035400 Sobic001G035400 Sobic008G176800--Sobic001G035400 Sobic003G167000 Sobic003G167000 Sobic007G048700--Sobic003G167000 Sobic002G070300 Sobic002G070300 Sobic007G048700--Sobic002G070300 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G003100 Sobic007G003100 Sobic007G048700--Sobic007G003100 Sobic001G347700 Sobic001G347700 Sobic007G048700--Sobic001G347700 Sobic008G132200 Sobic008G132200 Sobic007G048700--Sobic008G132200 Sobic001G343000 Sobic001G343000 Sobic007G048700--Sobic001G343000 Sobic007G048700--Sobic001G013200 Sobic006G091000 Sobic006G091000 Sobic007G053400--Sobic006G091000 Sobic007G053400--Sobic001G343000 Sobic003G211700 Sobic003G211700 Sobic007G053400--Sobic003G211700 Sobic004G353400 Sobic004G353400 Sobic007G053400--Sobic004G353400 Sobic010G074900 Sobic010G074900 Sobic007G053400--Sobic010G074900 Sobic010G172400 Sobic010G172400 Sobic007G053400--Sobic010G172400 Sobic007G139400 Sobic007G139400 Sobic007G053400--Sobic007G139400 Sobic007G201000 Sobic007G201000 Sobic007G053400--Sobic007G201000 Sobic009G040800 Sobic009G040800 Sobic007G053400--Sobic009G040800 Sobic002G297600 Sobic002G297600 Sobic006G029400--Sobic002G297600 Sobic004G075200 Sobic004G075200 Sobic006G029400--Sobic004G075200 Sobic002G254500 Sobic002G254500 Sobic006G029400--Sobic002G254500 Sobic009G041800 Sobic009G041800 Sobic006G029400--Sobic009G041800 Sobic001G413100 Sobic001G413100 Sobic006G029400--Sobic001G413100 Sobic002G399900 Sobic002G399900 Sobic006G029400--Sobic002G399900 Sobic006G029400--Sobic001G035400 Sobic003G008600 Sobic003G008600 Sobic006G029400--Sobic003G008600 Sobic002G264300 Sobic002G264300 Sobic006G029400--Sobic002G264300 Sobic004G164000 Sobic004G164000 Sobic009G255900--Sobic004G164000 Sobic003G131300 Sobic003G131300 Sobic009G255900--Sobic003G131300 Sobic009G255900--Sobic001G013200 Sobic004G159000 Sobic004G159000 Sobic009G255900--Sobic004G159000 Sobic007G019501 Sobic007G019501 Sobic009G255900--Sobic007G019501 Sobic004G344800 Sobic004G344800 Sobic009G255900--Sobic004G344800 Sobic007G192100 Sobic007G192100 Sobic009G255900--Sobic007G192100 Sobic009G255900--Sobic001G347700 Sobic009G255900--Sobic003G167000 Sobic008G035900 Sobic008G035900 Sobic007G009000--Sobic008G035900 Sobic001G230900 Sobic001G230900 Sobic007G009000--Sobic001G230900 Sobic001G030400 Sobic001G030400 Sobic007G009000--Sobic001G030400 Sobic003G003700 Sobic003G003700 Sobic007G009000--Sobic003G003700 Sobic001G157800 Sobic001G157800 Sobic007G009000--Sobic001G157800 Sobic003G024800 Sobic003G024800 Sobic007G009000--Sobic003G024800 Sobic004G134100 Sobic004G134100 Sobic007G009000--Sobic004G134100 Sobic001G402600 Sobic001G402600 Sobic007G009000--Sobic001G402600 Sobic001G445000 Sobic001G445000 Sobic007G009000--Sobic001G445000 Sobic006G104100 Sobic006G104100 Sobic010G217100--Sobic006G104100 Sobic010G144900 Sobic010G144900 Sobic010G217100--Sobic010G144900 Sobic009G124200 Sobic009G124200 Sobic010G217100--Sobic009G124200 Sobic010G138500 Sobic010G138500 Sobic010G217100--Sobic010G138500 Sobic010G217100--Sobic003G003700 Sobic009G224600 Sobic009G224600 Sobic010G217100--Sobic009G224600 Sobic001G468500 Sobic001G468500 Sobic010G217100--Sobic001G468500 Sobic001G226100 Sobic001G226100 Sobic010G217100--Sobic001G226100 Sobic006G191700 Sobic006G191700 Sobic010G217100--Sobic006G191700 Sobic001G013200--Sobic003G167000 Sobic001G013200--Sobic007G048700 Sobic001G013200--Sobic001G035400 Sobic008G014300 Sobic008G014300 Sobic001G013200--Sobic008G014300 Sobic006G203900 Sobic006G203900 Sobic001G013200--Sobic006G203900 Sobic009G112900 Sobic009G112900 Sobic001G013200--Sobic009G112900 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic001G013200--Sobic007G003100 Sobic002G029300 Sobic002G029300 Sobic004G031800--Sobic002G029300 Sobic004G031800--Sobic001G035400 Sobic001G116000 Sobic001G116000 Sobic004G031800--Sobic001G116000 Sobic010G105600 Sobic010G105600 Sobic004G031800--Sobic010G105600 Sobic009G207200 Sobic009G207200 Sobic004G031800--Sobic009G207200 Sobic004G031800--Sobic001G013200 Sobic001G010700 Sobic001G010700 Sobic004G031800--Sobic001G010700 Sobic001G196100 Sobic001G196100 Sobic004G031800--Sobic001G196100 Sobic006G222400 Sobic006G222400 Sobic004G031800--Sobic006G222400 Sobic001G035400--Sobic004G344800 Sobic001G035400--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic001G035400--Sobic008G084100 Sobic007G092100 Sobic007G092100 Sobic001G035400--Sobic007G092100 Sobic009G164700 Sobic009G164700 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G073600 Sobic001G073600 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G035400--Sobic001G116000
Octagon: transcription factors


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