Gene annotation
Transcriptome id Sobic.007G201000.3
Synonym Sb07g026860
Functional annotation methyltransferase domain containing protein, expressed
UniProt A0A1B6PJ48
Pfam PF08241
Panther DB PTHR12176 PTHR12176:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G17365 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os08g40580.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005178
Brachypodium PNT68437
Barley HORVU7Hr1G052530.18 , HORVU7Hr1G052530.19 , HORVU7Hr1G052530.10 , HORVU7Hr1G052530.11 , HORVU7Hr1G052530.12 , HORVU7Hr1G052530.15 , HORVU7Hr1G052530.16 , HORVU7Hr1G052530.17 , HORVU7Hr1G052530.8 , HORVU7Hr1G052530.9 , HORVU7Hr1G052530.3 , HORVU7Hr1G052530.7 , HORVU7Hr1G052530.4
Wheat TraesCS7A02G254100 , TraesCS7A02G254100 , TraesCS7D02G252600 , TraesCS7D02G252600 , TraesCS7B02G150300 , TraesCS7B02G150300
Populus -


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cDNA sequences
Sobic.007G201000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G286100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
2 Sobic.003G167000 protein phosphotase protein, putative, expressed -
3 Sobic.001G348000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
4 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
5 Sobic.007G158900 expressed protein -
6 Sobic.001G347700 protein phosphotase protein, putative, expressed -
7 Sobic.003G402900 HYS1, putative, expressed -
8 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
9 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
10 Sobic.010G028400 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
11 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
12 Sobic.007G053400 nuclear matrix protein 1, putative, expressed -
13 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
14 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
15 Sobic.002G276800 ER lumen protein retaining receptor, putative, expressed -
16 Sobic.003G044700 zinc finger family protein, putative, expressed -
17 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
18 Sobic.003G274200 5-nucleotidase surE, putative, expressed K03787: 5'-nucleotidase
19 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
20 Sobic.009G059400 expressed protein -


Gene co-expression network
sample Sobic007G201000 Sobic007G201000 Sobic001G286100 Sobic001G286100 Sobic007G201000--Sobic001G286100 Sobic003G167000 Sobic003G167000 Sobic007G201000--Sobic003G167000 Sobic001G348000 Sobic001G348000 Sobic007G201000--Sobic001G348000 Sobic002G401700 Sobic002G401700 Sobic007G201000--Sobic002G401700 Sobic007G158900 Sobic007G158900 Sobic007G201000--Sobic007G158900 Sobic001G347700 Sobic001G347700 Sobic007G201000--Sobic001G347700 Sobic003G402900 Sobic003G402900 Sobic007G201000--Sobic003G402900 Sobic001G343000 Sobic001G343000 Sobic007G201000--Sobic001G343000 Sobic007G192100 Sobic007G192100 Sobic007G201000--Sobic007G192100 Sobic004G069400 Sobic004G069400 Sobic001G286100--Sobic004G069400 Sobic008G118300 Sobic008G118300 Sobic001G286100--Sobic008G118300 Sobic003G418400 Sobic003G418400 Sobic001G286100--Sobic003G418400 Sobic001G286100--Sobic007G201000 Sobic010G250000 Sobic010G250000 Sobic001G286100--Sobic010G250000 Sobic001G135200 Sobic001G135200 Sobic001G286100--Sobic001G135200 Sobic006G271000 Sobic006G271000 Sobic001G286100--Sobic006G271000 Sobic009G063800 Sobic009G063800 Sobic001G286100--Sobic009G063800 Sobic001G309200 Sobic001G309200 Sobic001G286100--Sobic001G309200 Sobic007G048700 Sobic007G048700 Sobic003G167000--Sobic007G048700 Sobic003G167000--Sobic001G347700 Sobic001G013200 Sobic001G013200 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic009G218000 Sobic009G218000 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G113400 Sobic003G113400 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic002G268700 Sobic002G268700 Sobic001G348000--Sobic002G268700 Sobic001G192700 Sobic001G192700 Sobic001G348000--Sobic001G192700 Sobic001G348000--Sobic007G048700 Sobic008G132200 Sobic008G132200 Sobic001G348000--Sobic008G132200 Sobic001G348000--Sobic001G347700 Sobic005G210500 Sobic005G210500 Sobic001G348000--Sobic005G210500 Sobic002G232400 Sobic002G232400 Sobic001G348000--Sobic002G232400 Sobic001G348000--Sobic006G271000 Sobic001G348000--Sobic001G286100 Sobic010G007400 Sobic010G007400 Sobic002G401700--Sobic010G007400 Sobic007G012900 Sobic007G012900 Sobic002G401700--Sobic007G012900 Sobic004G159000 Sobic004G159000 Sobic002G401700--Sobic004G159000 Sobic007G117800 Sobic007G117800 Sobic002G401700--Sobic007G117800 Sobic001G050400 Sobic001G050400 Sobic002G401700--Sobic001G050400 Sobic003G116600 Sobic003G116600 Sobic002G401700--Sobic003G116600 Sobic008G108500 Sobic008G108500 Sobic002G401700--Sobic008G108500 Sobic002G276800 Sobic002G276800 Sobic002G401700--Sobic002G276800 Sobic001G378200 Sobic001G378200 Sobic002G401700--Sobic001G378200 Sobic009G199500 Sobic009G199500 Sobic007G158900--Sobic009G199500 Sobic010G181600 Sobic010G181600 Sobic007G158900--Sobic010G181600 Sobic007G192400 Sobic007G192400 Sobic007G158900--Sobic007G192400 Sobic009G059400 Sobic009G059400 Sobic007G158900--Sobic009G059400 Sobic002G023100 Sobic002G023100 Sobic007G158900--Sobic002G023100 Sobic001G017200 Sobic001G017200 Sobic007G158900--Sobic001G017200 Sobic007G218600 Sobic007G218600 Sobic007G158900--Sobic007G218600 Sobic004G218300 Sobic004G218300 Sobic007G158900--Sobic004G218300 Sobic008G006000 Sobic008G006000 Sobic007G158900--Sobic008G006000 Sobic001G347700--Sobic007G048700 Sobic001G347700--Sobic003G167000 Sobic001G352800 Sobic001G352800 Sobic001G347700--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic001G347700--Sobic001G485300 Sobic003G260600 Sobic003G260600 Sobic001G347700--Sobic003G260600 Sobic010G028400 Sobic010G028400 Sobic001G347700--Sobic010G028400 Sobic002G352200 Sobic002G352200 Sobic001G347700--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic001G347700--Sobic002G217500 Sobic004G040700 Sobic004G040700 Sobic001G347700--Sobic004G040700 Sobic007G030100 Sobic007G030100 Sobic003G402900--Sobic007G030100 Sobic003G368400 Sobic003G368400 Sobic003G402900--Sobic003G368400 Sobic001G385000 Sobic001G385000 Sobic003G402900--Sobic001G385000 Sobic004G017900 Sobic004G017900 Sobic003G402900--Sobic004G017900 Sobic007G189100 Sobic007G189100 Sobic003G402900--Sobic007G189100 Sobic002G147100 Sobic002G147100 Sobic003G402900--Sobic002G147100 Sobic006G215100 Sobic006G215100 Sobic003G402900--Sobic006G215100 Sobic002G147200 Sobic002G147200 Sobic003G402900--Sobic002G147200 Sobic007G043700 Sobic007G043700 Sobic003G402900--Sobic007G043700 Sobic007G146600 Sobic007G146600 Sobic001G343000--Sobic007G146600 Sobic003G393200 Sobic003G393200 Sobic001G343000--Sobic003G393200 Sobic001G343000--Sobic007G048700 Sobic002G182000 Sobic002G182000 Sobic001G343000--Sobic002G182000 Sobic001G343000--Sobic007G030100 Sobic001G343000--Sobic010G028400 Sobic002G070300 Sobic002G070300 Sobic001G343000--Sobic002G070300 Sobic001G343000--Sobic008G132200 Sobic001G012900 Sobic001G012900 Sobic001G343000--Sobic001G012900 Sobic007G192100--Sobic008G108500 Sobic001G036700 Sobic001G036700 Sobic007G192100--Sobic001G036700 Sobic001G402600 Sobic001G402600 Sobic007G192100--Sobic001G402600 Sobic002G176400 Sobic002G176400 Sobic007G192100--Sobic002G176400 Sobic001G126200 Sobic001G126200 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic002G399500 Sobic002G399500 Sobic007G192100--Sobic002G399500 Sobic007G192100--Sobic007G117800
Octagon: transcription factors


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