Gene annotation
| Transcriptome id | Sobic.003G274200.1 |
|---|---|
| Synonym | Sb03g032610 |
| Functional annotation | 5-nucleotidase surE, putative, expressed |
| UniProt | C5XI75 |
| Pfam | PF01975 |
| Panther DB | PTHR30457 PTHR30457:SF5 |
| NCBI CDD | - |
| KEGG Orthology | K03787; 5'-nucleotidase |
| Gene Ontology | GO:0016787; hydrolase activity |
Orthologs (automatic annotation)
| TAIR | AT1G72880 : Survival protein SurE-like phosphatase/nucleotidase |
|---|---|
| RAP-DB (Rice) | LOC_Os01g51280.1 : 5-nucleotidase surE, putative, expressed |
| MaizeGDB (Corn) | Zm00025a026005 , Zm00025a027827 , Zm00025a038937 , Zm00025a000765 |
| Brachypodium | KQK09426 |
| Barley | HORVU3Hr1G066890.3 , HORVU3Hr1G066890.2 , HORVU3Hr1G066890.1 , HORVU3Hr1G066890.4 |
| Wheat | TraesCS3A02G251100 , TraesCS3B02G280600 , TraesCS3D02G251500 |
| Populus | - |
JBrowse
| Sobic.003G274200 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G089100 | WD domain, G-beta repeat domain containing protein, expressed | - |
| 2 | Sobic.003G129900 | dehydrogenase, putative, expressed | K00030: isocitrate dehydrogenase (NAD+) |
| 3 | Sobic.002G228900 | RNA recognition motif containing protein, putative, expressed | - |
| 4 | Sobic.003G260600 | ATP synthase, putative, expressed | K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta |
| 5 | Sobic.002G420600 | nucleoside-triphosphatase, putative, expressed | - |
| 6 | Sobic.001G387200 | expressed protein | - |
| 7 | Sobic.003G167000 | protein phosphotase protein, putative, expressed | - |
| 8 | Sobic.002G255400 | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed | K09569: FK506-binding protein 2 |
| 9 | Sobic.007G014700 | Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed | K00847: E2.7.1.4, fructokinase |
| 10 | Sobic.004G256700 | ZAC, putative, expressed | K12486: stromal membrane-associated protein |
| 11 | Sobic.004G093600 | 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed | K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) |
| 12 | Sobic.004G173700 | SLL1 protein, putative, expressed | - |
| 13 | Sobic.006G120900 | dehydrogenase, putative, expressed | K00030: isocitrate dehydrogenase (NAD+) |
| 14 | Sobic.001G518500 | adenylate kinase, putative, expressed | K00939: adk, adenylate kinase |
| 15 | Sobic.002G259700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transketolase, putative, expressed | K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit |
| 16 | Sobic.005G019100 | TRAF-type zinc finger family protein, expressed | - |
| 17 | Sobic.004G017900 | ras-related protein, putative, expressed | K04392: Ras-related C3 botulinum toxin substrate 1 |
| 18 | Sobic.001G047600 | 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed | K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) |
| 19 | Sobic.009G224400 | ATP synthase, putative, expressed | K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta |
| 20 | Sobic.002G352200 | succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed | K01899: succinyl-CoA synthetase alpha subunit |
Gene co-expression network
Octagon: transcription factors
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