Gene annotation
Transcriptome id Sobic.001G215900.1,Sobic.001G215900.4,Sobic.001G215900.3,Sobic.001G215900.2
Synonym CRK2
Functional annotation TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1Z5S6Q3 , A0A1B6QK74 , A0A1Z5S731 , A0A1Z5S6S2
Pfam PF01657 PF00069 PF01657 PF07714
Panther DB PTHR27006 PTHR27006:SF30
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G70520 : cysteine-rich RLK (RECEPTOR-like protein kinase) 2
RAP-DB (Rice) LOC_Os11g28104.1 : TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a017596
Brachypodium KQJ97162
Barley HORVU1Hr1G042370.9 , HORVU1Hr1G042370.8 , HORVU1Hr1G042370.3 , HORVU1Hr1G042370.2 , HORVU1Hr1G042370.1 , HORVU1Hr1G042370.7 , HORVU1Hr1G042370.6 , HORVU1Hr1G042370.5 , HORVU1Hr1G042370.4 , HORVU1Hr1G042370.13 , HORVU1Hr1G042370.12 , HORVU1Hr1G042370.11 , HORVU1Hr1G042370.10 , HORVU1Hr1G042370.14
Wheat TraesCS3B02G024100 , TraesCS3D02G025100 , TraesCS3B02G024200 , TraesCS1D02G156900 , TraesCS1D02G156900 , TraesCS1A02G159500 , TraesCS1A02G159500 , TraesCS1B02G175900 , TraesCS1B02G175900 , TraesCS1B02G175900 , TraesCS3D02G025200 , TraesCS3A02G021600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G242900 disease resistance protein RGA3, putative, expressed -
2 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
3 Sobic.002G168600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
4 Sobic.010G138500 lectin protein kinase family protein, putative, expressed -
5 Sobic.004G134100 glycosyltransferase, putative, expressed -
6 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
7 Sobic.006G130501 - -
8 Sobic.009G013700 pectinacetylesterase domain containing protein, expressed -
9 Sobic.009G133900 inosine-uridine preferring nucleoside hydrolase family protein("PubMedID : 26759170,PubMedID : 24597475")@inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
10 Sobic.002G073400 - -
11 Sobic.002G317800 BNR/Asp-box repeat family protein, putative, expressed -
12 Sobic.001G538932 - -
13 Sobic.006G098200 steroid nuclear receptor, ligand-binding, putative, expressed -
14 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
15 Sobic.010G227950 - -
16 Sobic.005G054700 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
17 Sobic.005G204700 polygalacturonase, putative, expressed -
18 Sobic.001G069800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
19 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.006G033700 wax synthase isoform 1, putative, expressed -


Gene co-expression network
sample Sobic001G215900 Sobic001G215900 Sobic010G242900 Sobic010G242900 Sobic001G215900--Sobic010G242900 Sobic001G366800 Sobic001G366800 Sobic001G215900--Sobic001G366800 Sobic002G168600 Sobic002G168600 Sobic001G215900--Sobic002G168600 Sobic010G138500 Sobic010G138500 Sobic001G215900--Sobic010G138500 Sobic004G134100 Sobic004G134100 Sobic001G215900--Sobic004G134100 Sobic004G247300 Sobic004G247300 Sobic001G215900--Sobic004G247300 Sobic006G130501 Sobic006G130501 Sobic001G215900--Sobic006G130501 Sobic009G013700 Sobic009G013700 Sobic001G215900--Sobic009G013700 Sobic009G133900 Sobic009G133900 Sobic001G215900--Sobic009G133900 Sobic010G242900--Sobic001G215900 Sobic010G242900--Sobic004G134100 Sobic010G242900--Sobic002G168600 Sobic010G242900--Sobic009G013700 Sobic010G242900--Sobic010G138500 Sobic010G242900--Sobic001G366800 Sobic010G242900--Sobic006G130501 Sobic010G242900--Sobic004G247300 Sobic006G098200 Sobic006G098200 Sobic010G242900--Sobic006G098200 Sobic009G055400 Sobic009G055400 Sobic001G366800--Sobic009G055400 Sobic001G366800--Sobic001G215900 Sobic002G301500 Sobic002G301500 Sobic001G366800--Sobic002G301500 Sobic001G366800--Sobic004G134100 Sobic006G177300 Sobic006G177300 Sobic001G366800--Sobic006G177300 Sobic001G366800--Sobic004G247300 Sobic002G393200 Sobic002G393200 Sobic001G366800--Sobic002G393200 Sobic001G366800--Sobic010G138500 Sobic001G366800--Sobic010G242900 Sobic002G168600--Sobic010G242900 Sobic002G168600--Sobic001G215900 Sobic002G168600--Sobic004G134100 Sobic002G168600--Sobic006G130501 Sobic002G168600--Sobic009G013700 Sobic005G159600 Sobic005G159600 Sobic002G168600--Sobic005G159600 Sobic002G168600--Sobic004G247300 Sobic005G054700 Sobic005G054700 Sobic002G168600--Sobic005G054700 Sobic008G086200 Sobic008G086200 Sobic002G168600--Sobic008G086200 Sobic010G138500--Sobic004G134100 Sobic010G138500--Sobic001G215900 Sobic010G217100 Sobic010G217100 Sobic010G138500--Sobic010G217100 Sobic010G138500--Sobic010G242900 Sobic010G138500--Sobic001G366800 Sobic001G222400 Sobic001G222400 Sobic010G138500--Sobic001G222400 Sobic002G143000 Sobic002G143000 Sobic010G138500--Sobic002G143000 Sobic002G319200 Sobic002G319200 Sobic010G138500--Sobic002G319200 Sobic004G104800 Sobic004G104800 Sobic010G138500--Sobic004G104800 Sobic009G026200 Sobic009G026200 Sobic004G134100--Sobic009G026200 Sobic004G134100--Sobic010G242900 Sobic001G069800 Sobic001G069800 Sobic004G134100--Sobic001G069800 Sobic004G006700 Sobic004G006700 Sobic004G134100--Sobic004G006700 Sobic004G134100--Sobic005G159600 Sobic004G134100--Sobic010G138500 Sobic004G134100--Sobic001G215900 Sobic004G134100--Sobic001G366800 Sobic003G151300 Sobic003G151300 Sobic004G134100--Sobic003G151300 Sobic004G247300--Sobic005G054700 Sobic001G514400 Sobic001G514400 Sobic004G247300--Sobic001G514400 Sobic009G175200 Sobic009G175200 Sobic004G247300--Sobic009G175200 Sobic002G034301 Sobic002G034301 Sobic004G247300--Sobic002G034301 Sobic004G247300--Sobic001G215900 Sobic009G099700 Sobic009G099700 Sobic004G247300--Sobic009G099700 Sobic004G247300--Sobic001G366800 Sobic004G247300--Sobic010G242900 Sobic006G213100 Sobic006G213100 Sobic004G247300--Sobic006G213100 Sobic006G130501--Sobic006G098200 Sobic006G130501--Sobic009G133900 Sobic007G020300 Sobic007G020300 Sobic006G130501--Sobic007G020300 Sobic006G130501--Sobic006G213100 Sobic006G130501--Sobic001G215900 Sobic006G130501--Sobic010G242900 Sobic006G130501--Sobic002G168600 Sobic009G102300 Sobic009G102300 Sobic006G130501--Sobic009G102300 Sobic006G033700 Sobic006G033700 Sobic006G130501--Sobic006G033700 Sobic009G030300 Sobic009G030300 Sobic009G013700--Sobic009G030300 Sobic008G008400 Sobic008G008400 Sobic009G013700--Sobic008G008400 Sobic009G013700--Sobic006G033700 Sobic009G013700--Sobic010G242900 Sobic009G013700--Sobic001G215900 Sobic001G226000 Sobic001G226000 Sobic009G013700--Sobic001G226000 Sobic003G347300 Sobic003G347300 Sobic009G013700--Sobic003G347300 Sobic009G013700--Sobic002G168600 Sobic002G218700 Sobic002G218700 Sobic009G013700--Sobic002G218700 Sobic002G073400 Sobic002G073400 Sobic009G133900--Sobic002G073400 Sobic009G133900--Sobic006G130501 Sobic010G227950 Sobic010G227950 Sobic009G133900--Sobic010G227950 Sobic009G133900--Sobic001G215900 Sobic008G058400 Sobic008G058400 Sobic009G133900--Sobic008G058400 Sobic009G133900--Sobic006G098200 Sobic003G158100 Sobic003G158100 Sobic009G133900--Sobic003G158100 Sobic009G133900--Sobic004G247300 Sobic006G133600 Sobic006G133600 Sobic009G133900--Sobic006G133600
Octagon: transcription factors


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