Gene annotation
Transcriptome id Sobic.001G056300.1,Sobic.001G056300.2
Synonym Sb01g005130, UNE12
Functional annotation BHLH transcription factor, putative, expressed
UniProt C5WX65 , A0A1B6QHG7
Pfam PF00010
Panther DB PTHR16223 PTHR16223:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02590 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g58330.1 : BHLH transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a016567
Brachypodium KQK12699 , KQK12698 , KQK20577 , KQK20576 , KQK20575
Barley HORVU5Hr1G106310.8 , HORVU5Hr1G106310.9 , HORVU5Hr1G106310.2 , HORVU5Hr1G106310.3 , HORVU5Hr1G106310.6 , HORVU5Hr1G106310.7 , HORVU5Hr1G106310.4 , HORVU5Hr1G106310.5 , HORVU5Hr1G106310.18 , HORVU5Hr1G106310.19 , HORVU5Hr1G106310.10 , HORVU5Hr1G106310.11 , HORVU5Hr1G106310.12 , HORVU5Hr1G106310.13 , HORVU5Hr1G106310.14 , HORVU5Hr1G106310.15 , HORVU5Hr1G106310.16 , HORVU5Hr1G106310.17
Wheat TraesCS5B02G445900 , TraesCS5D02G449200 , TraesCS5A02G441900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
2 Sobic.009G113600 - -
3 Sobic.008G009500 pentatricopeptide, putative, expressed -
4 Sobic.002G062300 expressed protein -
5 Sobic.K024000 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
6 Sobic.007G099500 hypothetical protein -
7 Sobic.002G376800 EF hand family protein, putative -
8 Sobic.004G164600 - -
9 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
10 Sobic.005G054000 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
11 Sobic.004G212800 - -
12 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
13 Sobic.001G253100 3-5 exonuclease family protein, putative, expressed -
14 Sobic.008G108900 GRF zinc finger family protein, expressed -
15 Sobic.003G089650 - -
16 Sobic.002G221700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
18 Sobic.001G347600 paramyosin, putative, expressed -
19 Sobic.008G031350 - -
20 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase


Gene co-expression network
sample Sobic001G056300 Sobic001G056300 Sobic007G073400 Sobic007G073400 Sobic001G056300--Sobic007G073400 Sobic009G113600 Sobic009G113600 Sobic001G056300--Sobic009G113600 Sobic008G009500 Sobic008G009500 Sobic001G056300--Sobic008G009500 Sobic002G062300 Sobic002G062300 Sobic001G056300--Sobic002G062300 SobicK024000 SobicK024000 Sobic001G056300--SobicK024000 Sobic007G099500 Sobic007G099500 Sobic001G056300--Sobic007G099500 Sobic002G376800 Sobic002G376800 Sobic001G056300--Sobic002G376800 Sobic004G164600 Sobic004G164600 Sobic001G056300--Sobic004G164600 Sobic003G044900 Sobic003G044900 Sobic001G056300--Sobic003G044900 Sobic004G212800 Sobic004G212800 Sobic007G073400--Sobic004G212800 Sobic007G073400--Sobic004G164600 Sobic004G076732 Sobic004G076732 Sobic007G073400--Sobic004G076732 Sobic007G073400--Sobic008G009500 Sobic007G073400--Sobic009G113600 Sobic008G031350 Sobic008G031350 Sobic007G073400--Sobic008G031350 Sobic008G042250 Sobic008G042250 Sobic007G073400--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic007G073400--Sobic005G110430 Sobic004G143700 Sobic004G143700 Sobic007G073400--Sobic004G143700 Sobic009G113600--Sobic002G062300 Sobic007G059300 Sobic007G059300 Sobic009G113600--Sobic007G059300 Sobic009G113600--SobicK024000 Sobic009G196700 Sobic009G196700 Sobic009G113600--Sobic009G196700 Sobic009G113600--Sobic008G009500 Sobic008G108900 Sobic008G108900 Sobic009G113600--Sobic008G108900 Sobic003G031750 Sobic003G031750 Sobic009G113600--Sobic003G031750 Sobic009G113600--Sobic008G031350 Sobic010G146200 Sobic010G146200 Sobic009G113600--Sobic010G146200 Sobic008G009500--SobicK024000 Sobic008G009500--Sobic004G076732 Sobic008G009500--Sobic002G062300 Sobic008G009500--Sobic009G113600 Sobic001G253100 Sobic001G253100 Sobic008G009500--Sobic001G253100 Sobic008G009500--Sobic007G073400 Sobic009G209800 Sobic009G209800 Sobic008G009500--Sobic009G209800 Sobic008G009500--Sobic008G031350 Sobic005G221425 Sobic005G221425 Sobic008G009500--Sobic005G221425 Sobic002G062300--Sobic009G113600 Sobic002G062300--Sobic007G059300 Sobic002G062300--SobicK024000 Sobic005G212600 Sobic005G212600 Sobic002G062300--Sobic005G212600 Sobic002G062300--Sobic003G031750 Sobic002G062300--Sobic008G009500 Sobic002G062300--Sobic008G108900 Sobic002G062300--Sobic009G196700 Sobic002G062300--Sobic001G253100 SobicK024000--Sobic008G009500 SobicK024000--Sobic009G113600 SobicK024000--Sobic002G062300 SobicK024000--Sobic007G059300 SobicK024000--Sobic009G209800 SobicK024000--Sobic003G031750 SobicK024000--Sobic001G253100 Sobic008G079100 Sobic008G079100 SobicK024000--Sobic008G079100 Sobic002G221200 Sobic002G221200 SobicK024000--Sobic002G221200 Sobic009G059600 Sobic009G059600 Sobic007G099500--Sobic009G059600 Sobic007G099500--Sobic004G164600 Sobic002G090400 Sobic002G090400 Sobic007G099500--Sobic002G090400 Sobic007G099500--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic007G099500--Sobic003G424100 Sobic004G240900 Sobic004G240900 Sobic007G099500--Sobic004G240900 Sobic007G099500--Sobic008G031350 Sobic007G099500--Sobic004G212800 Sobic002G221700 Sobic002G221700 Sobic007G099500--Sobic002G221700 Sobic002G376900 Sobic002G376900 Sobic002G376800--Sobic002G376900 Sobic008G161401 Sobic008G161401 Sobic002G376800--Sobic008G161401 Sobic010G050600 Sobic010G050600 Sobic002G376800--Sobic010G050600 Sobic005G121800 Sobic005G121800 Sobic002G376800--Sobic005G121800 Sobic009G109450 Sobic009G109450 Sobic002G376800--Sobic009G109450 Sobic009G231300 Sobic009G231300 Sobic002G376800--Sobic009G231300 Sobic003G057800 Sobic003G057800 Sobic002G376800--Sobic003G057800 Sobic002G376800--Sobic009G113600 Sobic006G204200 Sobic006G204200 Sobic002G376800--Sobic006G204200 Sobic004G164600--Sobic004G212800 Sobic004G164600--Sobic005G110430 Sobic004G164600--Sobic007G073400 Sobic004G164600--Sobic008G042250 Sobic008G157950 Sobic008G157950 Sobic004G164600--Sobic008G157950 Sobic001G345333 Sobic001G345333 Sobic004G164600--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G164600--Sobic002G007250 SobicK009900 SobicK009900 Sobic004G164600--SobicK009900 Sobic004G164600--Sobic004G076732 Sobic002G221900 Sobic002G221900 Sobic003G044900--Sobic002G221900 Sobic003G044900--Sobic004G212800 Sobic003G044900--Sobic004G143700 Sobic001G024200 Sobic001G024200 Sobic003G044900--Sobic001G024200 Sobic003G044900--Sobic007G073400 Sobic003G044900--Sobic002G221700 Sobic003G015000 Sobic003G015000 Sobic003G044900--Sobic003G015000 Sobic002G039500 Sobic002G039500 Sobic003G044900--Sobic002G039500 Sobic009G214600 Sobic009G214600 Sobic003G044900--Sobic009G214600
Octagon: transcription factors


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