Gene annotation
Transcriptome id Sobic.006G160600.2,Sobic.006G160600.3,Sobic.006G160600.1,Sobic.006G160600.4
Synonym HINT4, Sb06g023750
Functional annotation histidine triad family protein, putative, expressed
UniProt A0A1Z5RE56 , A0A1Z5RE42 , A0A1Z5REU0 , C5YCY3
Pfam PF11969
Panther DB PTHR12486
NCBI CDD KOG3275; Zinc-binding protein of the histidine triad (HIT) family KOG4359Protein kinase C inhibitor-like protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16566 : histidine triad nucleotide-binding 4
RAP-DB (Rice) LOC_Os04g45280.1,LOC_Os04g45280.2 : histidine triad family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056593
Brachypodium KQJ83793 , KQJ83792
Barley -
Wheat TraesCS2D02G382500 , TraesCS2D02G382500 , TraesCS2D02G382500 , TraesCS2A02G386000 , TraesCS2B02G402900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G026100 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein
2 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
3 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
4 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
5 Sobic.001G054200 green ripe-like, putative, expressed -
6 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
8 Sobic.009G249000 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
9 Sobic.001G463100 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.003G396000 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
11 Sobic.007G079700 pentatricopeptide, putative, expressed -
12 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
13 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
14 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
15 Sobic.003G093900 splicing factor, putative, expressed -
16 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
17 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
18 Sobic.001G065700 glycine-rich protein, putative, expressed K13344: peroxin-13
19 Sobic.003G050600 expressed protein -
20 Sobic.001G206000 acyltransferase, putative, expressed K00655: 1-acyl-sn-glycerol-3-phosphate acyltransferase


Gene co-expression network
sample Sobic006G160600 Sobic006G160600 Sobic007G026100 Sobic007G026100 Sobic006G160600--Sobic007G026100 Sobic003G273100 Sobic003G273100 Sobic006G160600--Sobic003G273100 Sobic001G427800 Sobic001G427800 Sobic006G160600--Sobic001G427800 Sobic004G293700 Sobic004G293700 Sobic006G160600--Sobic004G293700 Sobic001G054200 Sobic001G054200 Sobic006G160600--Sobic001G054200 Sobic003G116700 Sobic003G116700 Sobic006G160600--Sobic003G116700 Sobic001G441600 Sobic001G441600 Sobic006G160600--Sobic001G441600 Sobic009G249000 Sobic009G249000 Sobic006G160600--Sobic009G249000 Sobic001G463100 Sobic001G463100 Sobic006G160600--Sobic001G463100 Sobic008G188700 Sobic008G188700 Sobic007G026100--Sobic008G188700 Sobic004G231400 Sobic004G231400 Sobic007G026100--Sobic004G231400 Sobic004G079100 Sobic004G079100 Sobic007G026100--Sobic004G079100 Sobic003G332401 Sobic003G332401 Sobic007G026100--Sobic003G332401 Sobic004G274700 Sobic004G274700 Sobic007G026100--Sobic004G274700 Sobic005G046100 Sobic005G046100 Sobic007G026100--Sobic005G046100 Sobic001G478300 Sobic001G478300 Sobic007G026100--Sobic001G478300 Sobic001G149700 Sobic001G149700 Sobic007G026100--Sobic001G149700 Sobic007G026100--Sobic006G160600 Sobic001G371300 Sobic001G371300 Sobic003G273100--Sobic001G371300 Sobic003G273100--Sobic001G149700 Sobic003G273100--Sobic001G478300 Sobic003G273100--Sobic004G274700 Sobic002G291300 Sobic002G291300 Sobic003G273100--Sobic002G291300 Sobic003G273100--Sobic001G427800 Sobic003G273100--Sobic004G231400 Sobic007G126200 Sobic007G126200 Sobic003G273100--Sobic007G126200 Sobic003G273100--Sobic004G079100 Sobic001G427800--Sobic001G478300 Sobic001G427800--Sobic001G149700 Sobic010G071200 Sobic010G071200 Sobic001G427800--Sobic010G071200 Sobic001G427800--Sobic003G273100 Sobic001G427800--Sobic001G371300 Sobic001G427800--Sobic002G291300 Sobic003G093900 Sobic003G093900 Sobic001G427800--Sobic003G093900 Sobic008G142700 Sobic008G142700 Sobic001G427800--Sobic008G142700 Sobic003G350600 Sobic003G350600 Sobic001G427800--Sobic003G350600 Sobic010G253800 Sobic010G253800 Sobic004G293700--Sobic010G253800 Sobic004G293700--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic004G293700--Sobic010G083700 Sobic004G293700--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic004G293700--Sobic004G248800 Sobic009G171700 Sobic009G171700 Sobic004G293700--Sobic009G171700 Sobic002G264400 Sobic002G264400 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic003G220600 Sobic003G220600 Sobic004G293700--Sobic003G220600 Sobic001G054200--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic007G186300 Sobic007G186300 Sobic001G054200--Sobic007G186300 Sobic001G054200--Sobic004G293700 Sobic009G246950 Sobic009G246950 Sobic001G054200--Sobic009G246950 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic003G116700--Sobic001G149700 Sobic003G116700--Sobic001G441600 Sobic007G079700 Sobic007G079700 Sobic003G116700--Sobic007G079700 Sobic004G014000 Sobic004G014000 Sobic003G116700--Sobic004G014000 Sobic003G116700--Sobic007G126200 Sobic009G065000 Sobic009G065000 Sobic003G116700--Sobic009G065000 Sobic010G055500 Sobic010G055500 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic001G441600--Sobic003G116700 Sobic008G161000 Sobic008G161000 Sobic001G441600--Sobic008G161000 Sobic001G335400 Sobic001G335400 Sobic001G441600--Sobic001G335400 Sobic009G016201 Sobic009G016201 Sobic001G441600--Sobic009G016201 Sobic003G396000 Sobic003G396000 Sobic001G441600--Sobic003G396000 Sobic009G152200 Sobic009G152200 Sobic001G441600--Sobic009G152200 Sobic001G441600--Sobic003G115800 Sobic001G441600--Sobic010G071200 Sobic003G317200 Sobic003G317200 Sobic001G441600--Sobic003G317200 Sobic005G092800 Sobic005G092800 Sobic009G249000--Sobic005G092800 Sobic004G157800 Sobic004G157800 Sobic009G249000--Sobic004G157800 Sobic004G172700 Sobic004G172700 Sobic009G249000--Sobic004G172700 Sobic004G352900 Sobic004G352900 Sobic009G249000--Sobic004G352900 Sobic010G062800 Sobic010G062800 Sobic009G249000--Sobic010G062800 Sobic009G249000--Sobic004G014000 Sobic001G403700 Sobic001G403700 Sobic009G249000--Sobic001G403700 Sobic002G078400 Sobic002G078400 Sobic009G249000--Sobic002G078400 Sobic008G132800 Sobic008G132800 Sobic009G249000--Sobic008G132800 Sobic004G337000 Sobic004G337000 Sobic001G463100--Sobic004G337000 Sobic001G463100--Sobic006G160600 Sobic010G135000 Sobic010G135000 Sobic001G463100--Sobic010G135000 Sobic001G463100--Sobic001G054200 Sobic004G083300 Sobic004G083300 Sobic001G463100--Sobic004G083300 Sobic010G199100 Sobic010G199100 Sobic001G463100--Sobic010G199100 Sobic001G138300 Sobic001G138300 Sobic001G463100--Sobic001G138300 Sobic004G265700 Sobic004G265700 Sobic001G463100--Sobic004G265700 Sobic009G131100 Sobic009G131100 Sobic001G463100--Sobic009G131100
Octagon: transcription factors


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