Gene annotation
Transcriptome id Sobic.001G206000.4,Sobic.001G206000.2,Sobic.001G206000.3
Synonym Sb01g018210, LPAT1, EMB1995, ATS2
Functional annotation acyltransferase, putative, expressed
UniProt A0A1Z5S6M8 , A0A1B6QK07 , A0A1Z5S6K1
Pfam PF01553
Panther DB PTHR10434
NCBI CDD KOG2848; 1-acyl-sn-glycerol-3-phosphate acyltransferase
KEGG Orthology K00655; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G30580 : Phospholipid/glycerol acyltransferase family protein
RAP-DB (Rice) LOC_Os10g35390.1 : acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a017501
Brachypodium KQJ97288
Barley HORVU1Hr1G044570.9 , HORVU1Hr1G044570.8 , HORVU1Hr1G044570.3 , HORVU1Hr1G044570.2 , HORVU1Hr1G044570.1 , HORVU1Hr1G044570.7 , HORVU1Hr1G044570.6 , HORVU1Hr1G044570.5 , HORVU1Hr1G044570.4 , HORVU1Hr1G044570.13 , HORVU1Hr1G044570.12 , HORVU1Hr1G044570.10 , HORVU1Hr1G044570.17 , HORVU1Hr1G044570.16 , HORVU1Hr1G044570.15 , HORVU1Hr1G044570.14
Wheat TraesCS1B02G186100 , TraesCS1B02G186100 , TraesCS1B02G186100 , TraesCS1D02G168900 , TraesCS1A02G171200 , TraesCS1D02G168900
Populus -


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cDNA sequences
Sobic.001G206000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
3 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
5 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
6 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
7 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
8 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
9 Sobic.007G079700 pentatricopeptide, putative, expressed -
10 Sobic.002G088700 domain of unknown function domain containing protein, expressed -
11 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
12 Sobic.003G332401 - K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
13 Sobic.003G311700 cyclase/dehydrase family protein, expressed K18588: coenzyme Q-binding protein COQ10
14 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
15 Sobic.008G142700 expressed protein -
16 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
17 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
18 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
19 Sobic.010G228600 LSM domain containing protein, expressed -
20 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1


Gene co-expression network
sample Sobic001G206000 Sobic001G206000 Sobic003G116700 Sobic003G116700 Sobic001G206000--Sobic003G116700 Sobic001G149700 Sobic001G149700 Sobic001G206000--Sobic001G149700 Sobic009G065000 Sobic009G065000 Sobic001G206000--Sobic009G065000 Sobic010G055500 Sobic010G055500 Sobic001G206000--Sobic010G055500 Sobic001G281700 Sobic001G281700 Sobic001G206000--Sobic001G281700 Sobic004G231400 Sobic004G231400 Sobic001G206000--Sobic004G231400 Sobic003G317200 Sobic003G317200 Sobic001G206000--Sobic003G317200 Sobic010G071200 Sobic010G071200 Sobic001G206000--Sobic010G071200 Sobic007G079700 Sobic007G079700 Sobic001G206000--Sobic007G079700 Sobic003G116700--Sobic001G206000 Sobic003G116700--Sobic001G149700 Sobic001G441600 Sobic001G441600 Sobic003G116700--Sobic001G441600 Sobic003G116700--Sobic007G079700 Sobic004G014000 Sobic004G014000 Sobic003G116700--Sobic004G014000 Sobic007G126200 Sobic007G126200 Sobic003G116700--Sobic007G126200 Sobic003G116700--Sobic009G065000 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic001G149700--Sobic010G071200 Sobic001G149700--Sobic010G055500 Sobic001G149700--Sobic004G231400 Sobic001G478300 Sobic001G478300 Sobic001G149700--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic001G149700--Sobic006G257900 Sobic008G142700 Sobic008G142700 Sobic001G149700--Sobic008G142700 Sobic003G273100 Sobic003G273100 Sobic001G149700--Sobic003G273100 Sobic001G076000 Sobic001G076000 Sobic001G149700--Sobic001G076000 Sobic001G512900 Sobic001G512900 Sobic001G149700--Sobic001G512900 Sobic004G164500 Sobic004G164500 Sobic009G065000--Sobic004G164500 Sobic001G311000 Sobic001G311000 Sobic009G065000--Sobic001G311000 Sobic009G065000--Sobic001G206000 Sobic008G106800 Sobic008G106800 Sobic009G065000--Sobic008G106800 Sobic009G065000--Sobic006G257900 Sobic001G471900 Sobic001G471900 Sobic009G065000--Sobic001G471900 Sobic007G177100 Sobic007G177100 Sobic009G065000--Sobic007G177100 Sobic010G228600 Sobic010G228600 Sobic009G065000--Sobic010G228600 Sobic009G065000--Sobic003G116700 Sobic010G055500--Sobic010G071200 Sobic004G263900 Sobic004G263900 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400 Sobic001G281700--Sobic001G206000 Sobic002G088700 Sobic002G088700 Sobic001G281700--Sobic002G088700 Sobic001G281700--Sobic001G149700 Sobic007G115900 Sobic007G115900 Sobic001G281700--Sobic007G115900 Sobic001G281700--Sobic010G071200 Sobic001G281700--Sobic010G055500 Sobic001G281700--Sobic006G257900 Sobic009G032300 Sobic009G032300 Sobic001G281700--Sobic009G032300 Sobic006G254600 Sobic006G254600 Sobic001G281700--Sobic006G254600 Sobic004G231400--Sobic010G055500 Sobic004G231400--Sobic010G071200 Sobic004G231400--Sobic001G478300 Sobic004G231400--Sobic001G149700 Sobic004G274700 Sobic004G274700 Sobic004G231400--Sobic004G274700 Sobic006G088100 Sobic006G088100 Sobic004G231400--Sobic006G088100 Sobic004G231400--Sobic006G257900 Sobic004G231400--Sobic004G150400 Sobic006G209500 Sobic006G209500 Sobic004G231400--Sobic006G209500 Sobic003G317200--Sobic010G055500 Sobic003G317200--Sobic010G071200 Sobic003G317200--Sobic006G109300 Sobic003G317200--Sobic008G142700 Sobic003G317200--Sobic001G206000 Sobic003G317200--Sobic001G441600 Sobic003G317200--Sobic004G231400 Sobic003G317200--Sobic001G149700 Sobic001G138300 Sobic001G138300 Sobic003G317200--Sobic001G138300 Sobic010G071200--Sobic010G055500 Sobic010G071200--Sobic001G149700 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic010G071200--Sobic001G478300 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic009G114800 Sobic009G114800 Sobic007G079700--Sobic009G114800 Sobic006G054500 Sobic006G054500 Sobic007G079700--Sobic006G054500 Sobic006G262900 Sobic006G262900 Sobic007G079700--Sobic006G262900 Sobic002G273900 Sobic002G273900 Sobic007G079700--Sobic002G273900 Sobic009G199700 Sobic009G199700 Sobic007G079700--Sobic009G199700 Sobic007G079700--Sobic003G116700 Sobic004G301900 Sobic004G301900 Sobic007G079700--Sobic004G301900 Sobic004G253000 Sobic004G253000 Sobic007G079700--Sobic004G253000 Sobic004G272300 Sobic004G272300 Sobic007G079700--Sobic004G272300
Octagon: transcription factors


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