Gene annotation
Transcriptome id Sobic.001G065700.2,Sobic.001G065700.1,Sobic.001G065700.3,Sobic.001G065700.4
Synonym APM2, PEX13
Functional annotation glycine-rich protein, putative, expressed
UniProt A0A1Z5S4M7 , A0A1B6QHK4
Pfam -
Panther DB PTHR19332 PTHR19332:SF2
NCBI CDD -
KEGG Orthology K13344; peroxin-13
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07560 : peroxin 13
RAP-DB (Rice) LOC_Os03g57210.1 : glycine-rich protein, putative, expressed
MaizeGDB (Corn) Zm00025a008473
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G065700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G044200 C2 domain containing protein, putative, expressed -
2 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
3 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
4 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
5 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
6 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
7 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
8 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
9 Sobic.004G253000 AGAP000425-PA, putative, expressed K13120: protein FAM32A
10 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
11 Sobic.003G050600 expressed protein -
12 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.001G290200 leucine rich repeat containing protein, expressed -
14 Sobic.009G059700 thioredoxin, putative, expressed K03671: thioredoxin 1
15 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
16 Sobic.001G162100 WRKY94, expressed -
17 Sobic.007G019800 expressed protein -
18 Sobic.001G206000 acyltransferase, putative, expressed K00655: 1-acyl-sn-glycerol-3-phosphate acyltransferase
19 Sobic.003G127400 BSD domain-containing protein, putative, expressed -
20 Sobic.009G137800 expressed protein -


Gene co-expression network
sample Sobic001G065700 Sobic001G065700 Sobic003G044200 Sobic003G044200 Sobic001G065700--Sobic003G044200 Sobic010G055500 Sobic010G055500 Sobic001G065700--Sobic010G055500 Sobic006G225600 Sobic006G225600 Sobic001G065700--Sobic006G225600 Sobic001G512900 Sobic001G512900 Sobic001G065700--Sobic001G512900 Sobic009G193400 Sobic009G193400 Sobic001G065700--Sobic009G193400 Sobic002G365100 Sobic002G365100 Sobic001G065700--Sobic002G365100 Sobic001G098200 Sobic001G098200 Sobic001G065700--Sobic001G098200 Sobic003G051200 Sobic003G051200 Sobic001G065700--Sobic003G051200 Sobic004G253000 Sobic004G253000 Sobic001G065700--Sobic004G253000 Sobic003G044200--Sobic001G065700 Sobic003G044200--Sobic001G098200 Sobic003G044200--Sobic006G225600 Sobic005G105000 Sobic005G105000 Sobic003G044200--Sobic005G105000 Sobic006G218700 Sobic006G218700 Sobic003G044200--Sobic006G218700 Sobic009G167600 Sobic009G167600 Sobic003G044200--Sobic009G167600 Sobic001G503300 Sobic001G503300 Sobic003G044200--Sobic001G503300 Sobic009G137800 Sobic009G137800 Sobic003G044200--Sobic009G137800 Sobic003G044200--Sobic009G193400 Sobic010G071200 Sobic010G071200 Sobic010G055500--Sobic010G071200 Sobic004G263900 Sobic004G263900 Sobic010G055500--Sobic004G263900 Sobic001G149700 Sobic001G149700 Sobic010G055500--Sobic001G149700 Sobic004G231400 Sobic004G231400 Sobic010G055500--Sobic004G231400 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic008G142700 Sobic008G142700 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400 Sobic004G234900 Sobic004G234900 Sobic006G225600--Sobic004G234900 Sobic002G251700 Sobic002G251700 Sobic006G225600--Sobic002G251700 Sobic001G162100 Sobic001G162100 Sobic006G225600--Sobic001G162100 Sobic006G225600--Sobic001G098200 Sobic003G295400 Sobic003G295400 Sobic006G225600--Sobic003G295400 Sobic002G122700 Sobic002G122700 Sobic006G225600--Sobic002G122700 Sobic004G274400 Sobic004G274400 Sobic006G225600--Sobic004G274400 Sobic001G051200 Sobic001G051200 Sobic006G225600--Sobic001G051200 Sobic001G434900 Sobic001G434900 Sobic006G225600--Sobic001G434900 Sobic001G512900--Sobic010G071200 Sobic001G512900--Sobic010G055500 Sobic001G512900--Sobic008G142700 Sobic008G174300 Sobic008G174300 Sobic001G512900--Sobic008G174300 Sobic001G083600 Sobic001G083600 Sobic001G512900--Sobic001G083600 Sobic001G512900--Sobic001G390500 Sobic001G512900--Sobic001G149700 Sobic003G127400 Sobic003G127400 Sobic001G512900--Sobic003G127400 Sobic009G246950 Sobic009G246950 Sobic001G512900--Sobic009G246950 Sobic003G007500 Sobic003G007500 Sobic009G193400--Sobic003G007500 Sobic003G433100 Sobic003G433100 Sobic009G193400--Sobic003G433100 Sobic009G171700 Sobic009G171700 Sobic009G193400--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G193400--Sobic008G180900 Sobic009G193400--Sobic003G295400 Sobic004G104900 Sobic004G104900 Sobic009G193400--Sobic004G104900 Sobic001G478300 Sobic001G478300 Sobic009G193400--Sobic001G478300 Sobic002G413000 Sobic002G413000 Sobic009G193400--Sobic002G413000 Sobic010G083700 Sobic010G083700 Sobic009G193400--Sobic010G083700 Sobic003G185200 Sobic003G185200 Sobic002G365100--Sobic003G185200 Sobic003G261300 Sobic003G261300 Sobic002G365100--Sobic003G261300 Sobic003G248500 Sobic003G248500 Sobic002G365100--Sobic003G248500 Sobic003G359300 Sobic003G359300 Sobic002G365100--Sobic003G359300 Sobic004G246700 Sobic004G246700 Sobic002G365100--Sobic004G246700 Sobic002G365100--Sobic010G055500 Sobic010G174800 Sobic010G174800 Sobic002G365100--Sobic010G174800 Sobic001G028400 Sobic001G028400 Sobic002G365100--Sobic001G028400 Sobic006G128800 Sobic006G128800 Sobic002G365100--Sobic006G128800 Sobic001G098200--Sobic004G234900 Sobic001G098200--Sobic006G225600 Sobic001G098200--Sobic004G253000 Sobic001G098200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G098200--Sobic010G090900 Sobic003G050600 Sobic003G050600 Sobic001G098200--Sobic003G050600 Sobic004G301900 Sobic004G301900 Sobic001G098200--Sobic004G301900 Sobic001G098200--Sobic001G051200 Sobic001G098200--Sobic003G044200 Sobic003G051200--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G051200--Sobic004G283000 Sobic003G051200--Sobic001G390500 Sobic002G378200 Sobic002G378200 Sobic003G051200--Sobic002G378200 Sobic007G111100 Sobic007G111100 Sobic003G051200--Sobic007G111100 Sobic003G051200--Sobic002G365100 Sobic002G388200 Sobic002G388200 Sobic003G051200--Sobic002G388200 Sobic003G051200--Sobic001G083600 Sobic001G371200 Sobic001G371200 Sobic003G051200--Sobic001G371200 Sobic004G253000--Sobic003G050600 Sobic004G253000--Sobic010G083700 Sobic004G253000--Sobic001G098200 Sobic003G015900 Sobic003G015900 Sobic004G253000--Sobic003G015900 Sobic003G250500 Sobic003G250500 Sobic004G253000--Sobic003G250500 Sobic004G059000 Sobic004G059000 Sobic004G253000--Sobic004G059000 Sobic004G253000--Sobic001G051200 Sobic004G253000--Sobic009G246950 Sobic003G000800 Sobic003G000800 Sobic004G253000--Sobic003G000800
Octagon: transcription factors


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