Gene annotation
Transcriptome id Sobic.003G111100.2
Synonym Sb03g009350
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
pathogen-related protein, putative, expressed
UniProt A0A1B6Q2K5
Pfam -
Panther DB PTHR31723 PTHR31723:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78780 : pathogenesis-related family protein
RAP-DB (Rice) LOC_Os01g14590.1 : pathogen-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a023905
Brachypodium KQK03588 , PNT70252
Barley HORVU3Hr1G033930.3 , HORVU3Hr1G033930.2 , HORVU3Hr1G033930.1 , HORVU3Hr1G033930.5 , HORVU3Hr1G033930.4 , HORVU1Hr1G093890.8 , HORVU1Hr1G093890.4 , HORVU1Hr1G093890.5 , HORVU1Hr1G093890.6 , HORVU1Hr1G093890.7 , HORVU1Hr1G093890.1 , HORVU1Hr1G093890.2 , HORVU1Hr1G093890.3
Wheat TraesCS1B02G466200 , TraesCS3B02G199600 , TraesCS3A02G166300 , TraesCS5D02G067500 , TraesCS3D02G175200 , TraesCS1D02G440500 , TraesCS6A02G005100 , TraesCS1A02G431400 , TraesCS3B02G038500 , TraesCS3A02G166500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
2 Sobic.001G119500 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
4 Sobic.009G065300 expressed protein -
5 Sobic.002G361200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
6 Sobic.002G109400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.010G192900 expressed protein -
8 Sobic.002G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
9 Sobic.002G327100 expressed protein -
10 Sobic.003G139000 aminotransferase, putative, expressed -
11 Sobic.002G326100 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
12 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.009G130100 CHIT17 - Chitinase family protein precursor, expressed K01183: chitinase
14 Sobic.004G245100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
15 Sobic.004G112300 - -
16 Sobic.003G215200 expressed protein -
17 Sobic.007G049766 - -
18 Sobic.010G001000 expressed protein -
19 Sobic.008G187300 expressed protein -
20 Sobic.002G327300 expressed protein -


Gene co-expression network
sample Sobic003G111100 Sobic003G111100 Sobic003G228200 Sobic003G228200 Sobic003G111100--Sobic003G228200 Sobic001G119500 Sobic001G119500 Sobic003G111100--Sobic001G119500 Sobic007G115500 Sobic007G115500 Sobic003G111100--Sobic007G115500 Sobic009G065300 Sobic009G065300 Sobic003G111100--Sobic009G065300 Sobic002G361200 Sobic002G361200 Sobic003G111100--Sobic002G361200 Sobic002G109400 Sobic002G109400 Sobic003G111100--Sobic002G109400 Sobic010G192900 Sobic010G192900 Sobic003G111100--Sobic010G192900 Sobic002G024000 Sobic002G024000 Sobic003G111100--Sobic002G024000 Sobic002G327100 Sobic002G327100 Sobic003G111100--Sobic002G327100 Sobic002G327300 Sobic002G327300 Sobic003G228200--Sobic002G327300 Sobic003G264600 Sobic003G264600 Sobic003G228200--Sobic003G264600 Sobic001G318500 Sobic001G318500 Sobic003G228200--Sobic001G318500 Sobic003G228200--Sobic002G327100 Sobic003G037500 Sobic003G037500 Sobic003G228200--Sobic003G037500 Sobic006G158400 Sobic006G158400 Sobic003G228200--Sobic006G158400 Sobic004G245100 Sobic004G245100 Sobic003G228200--Sobic004G245100 Sobic003G192100 Sobic003G192100 Sobic003G228200--Sobic003G192100 Sobic010G270500 Sobic010G270500 Sobic003G228200--Sobic010G270500 Sobic001G119500--Sobic001G318500 Sobic008G172600 Sobic008G172600 Sobic001G119500--Sobic008G172600 Sobic003G255200 Sobic003G255200 Sobic001G119500--Sobic003G255200 Sobic002G004900 Sobic002G004900 Sobic001G119500--Sobic002G004900 Sobic005G092900 Sobic005G092900 Sobic001G119500--Sobic005G092900 Sobic010G001000 Sobic010G001000 Sobic001G119500--Sobic010G001000 Sobic002G017800 Sobic002G017800 Sobic001G119500--Sobic002G017800 Sobic004G107700 Sobic004G107700 Sobic001G119500--Sobic004G107700 Sobic001G416200 Sobic001G416200 Sobic001G119500--Sobic001G416200 Sobic007G115500--Sobic003G228200 Sobic007G115500--Sobic002G327300 Sobic001G318200 Sobic001G318200 Sobic007G115500--Sobic001G318200 Sobic007G127100 Sobic007G127100 Sobic007G115500--Sobic007G127100 Sobic007G115500--Sobic002G024000 Sobic007G115500--Sobic009G065300 Sobic003G360200 Sobic003G360200 Sobic007G115500--Sobic003G360200 Sobic007G115500--Sobic003G192100 Sobic005G080200 Sobic005G080200 Sobic007G115500--Sobic005G080200 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic009G065300--Sobic002G327100 Sobic009G065300--Sobic003G228200 Sobic003G416300 Sobic003G416300 Sobic009G065300--Sobic003G416300 Sobic009G065300--Sobic003G037500 Sobic009G065300--Sobic007G127100 Sobic009G065300--Sobic001G318500 Sobic002G302500 Sobic002G302500 Sobic009G065300--Sobic002G302500 Sobic006G274933 Sobic006G274933 Sobic002G361200--Sobic006G274933 Sobic003G311800 Sobic003G311800 Sobic002G361200--Sobic003G311800 Sobic002G361200--Sobic010G001000 Sobic007G090469 Sobic007G090469 Sobic002G361200--Sobic007G090469 Sobic006G157900 Sobic006G157900 Sobic002G361200--Sobic006G157900 Sobic002G183700 Sobic002G183700 Sobic002G361200--Sobic002G183700 Sobic001G300500 Sobic001G300500 Sobic002G361200--Sobic001G300500 Sobic003G417100 Sobic003G417100 Sobic002G361200--Sobic003G417100 Sobic010G252500 Sobic010G252500 Sobic002G361200--Sobic010G252500 Sobic005G038900 Sobic005G038900 Sobic002G109400--Sobic005G038900 Sobic008G011600 Sobic008G011600 Sobic002G109400--Sobic008G011600 Sobic004G225500 Sobic004G225500 Sobic002G109400--Sobic004G225500 Sobic004G284500 Sobic004G284500 Sobic002G109400--Sobic004G284500 Sobic001G353600 Sobic001G353600 Sobic002G109400--Sobic001G353600 Sobic004G158901 Sobic004G158901 Sobic002G109400--Sobic004G158901 Sobic010G041600 Sobic010G041600 Sobic002G109400--Sobic010G041600 Sobic004G351500 Sobic004G351500 Sobic002G109400--Sobic004G351500 Sobic008G059200 Sobic008G059200 Sobic002G109400--Sobic008G059200 Sobic006G068800 Sobic006G068800 Sobic010G192900--Sobic006G068800 Sobic010G192900--Sobic002G327100 Sobic010G192900--Sobic003G037500 Sobic004G297900 Sobic004G297900 Sobic010G192900--Sobic004G297900 Sobic006G009000 Sobic006G009000 Sobic010G192900--Sobic006G009000 Sobic006G009100 Sobic006G009100 Sobic010G192900--Sobic006G009100 Sobic010G192900--Sobic003G228200 Sobic006G255400 Sobic006G255400 Sobic010G192900--Sobic006G255400 Sobic010G192900--Sobic003G311800 Sobic002G024000--Sobic010G192900 Sobic002G024000--Sobic003G417100 Sobic002G024000--Sobic006G068800 Sobic002G024000--Sobic007G115500 Sobic010G194100 Sobic010G194100 Sobic002G024000--Sobic010G194100 Sobic002G024000--Sobic002G361200 Sobic002G024000--Sobic006G009000 Sobic009G171600 Sobic009G171600 Sobic002G024000--Sobic009G171600 Sobic002G024000--Sobic003G228200 Sobic004G295100 Sobic004G295100 Sobic002G327100--Sobic004G295100 Sobic008G009400 Sobic008G009400 Sobic002G327100--Sobic008G009400 Sobic002G327100--Sobic006G009100 Sobic002G327100--Sobic003G228200 Sobic002G327100--Sobic002G327300 Sobic001G330300 Sobic001G330300 Sobic002G327100--Sobic001G330300 Sobic002G327100--Sobic003G311800 Sobic002G176100 Sobic002G176100 Sobic002G327100--Sobic002G176100 Sobic003G299300 Sobic003G299300 Sobic002G327100--Sobic003G299300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.