Gene annotation
Transcriptome id Sobic.008G187300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PEL8
Pfam -
Panther DB PTHR33696 PTHR33696:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g43750.1 : expressed protein
MaizeGDB (Corn) Zm00025a004851
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G157900 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.002G361200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
3 Sobic.002G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
4 Sobic.009G171600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY70, expressed -
5 Sobic.010G192900 expressed protein -
6 Sobic.003G111100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogen-related protein, putative, expressed -
7 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
8 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
10 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
11 Sobic.004G351500 - -
12 Sobic.005G137300 only inducible by pathogen inoculation(PubMedID : 20529887)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
13 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
14 Sobic.006G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
15 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
16 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
17 Sobic.001G302500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
18 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
19 Sobic.003G215200 expressed protein -
20 Sobic.004G051700 OTU-like cysteine protease family protein, putative, expressed K13719: OTU1, ubiquitin thioesterase OTU1


Gene co-expression network
sample Sobic008G187300 Sobic008G187300 Sobic007G157900 Sobic007G157900 Sobic008G187300--Sobic007G157900 Sobic002G361200 Sobic002G361200 Sobic008G187300--Sobic002G361200 Sobic002G024000 Sobic002G024000 Sobic008G187300--Sobic002G024000 Sobic009G171600 Sobic009G171600 Sobic008G187300--Sobic009G171600 Sobic010G192900 Sobic010G192900 Sobic008G187300--Sobic010G192900 Sobic003G111100 Sobic003G111100 Sobic008G187300--Sobic003G111100 Sobic007G078100 Sobic007G078100 Sobic008G187300--Sobic007G078100 Sobic001G432700 Sobic001G432700 Sobic008G187300--Sobic001G432700 Sobic010G194100 Sobic010G194100 Sobic008G187300--Sobic010G194100 Sobic009G238900 Sobic009G238900 Sobic007G157900--Sobic009G238900 Sobic004G351500 Sobic004G351500 Sobic007G157900--Sobic004G351500 Sobic007G157900--Sobic010G194100 Sobic002G232700 Sobic002G232700 Sobic007G157900--Sobic002G232700 Sobic009G054100 Sobic009G054100 Sobic007G157900--Sobic009G054100 Sobic003G417100 Sobic003G417100 Sobic007G157900--Sobic003G417100 Sobic004G062500 Sobic004G062500 Sobic007G157900--Sobic004G062500 Sobic004G262500 Sobic004G262500 Sobic007G157900--Sobic004G262500 Sobic007G127100 Sobic007G127100 Sobic007G157900--Sobic007G127100 Sobic006G274933 Sobic006G274933 Sobic002G361200--Sobic006G274933 Sobic003G311800 Sobic003G311800 Sobic002G361200--Sobic003G311800 Sobic010G001000 Sobic010G001000 Sobic002G361200--Sobic010G001000 Sobic007G090469 Sobic007G090469 Sobic002G361200--Sobic007G090469 Sobic006G157900 Sobic006G157900 Sobic002G361200--Sobic006G157900 Sobic002G183700 Sobic002G183700 Sobic002G361200--Sobic002G183700 Sobic001G300500 Sobic001G300500 Sobic002G361200--Sobic001G300500 Sobic002G361200--Sobic003G417100 Sobic010G252500 Sobic010G252500 Sobic002G361200--Sobic010G252500 Sobic002G024000--Sobic010G192900 Sobic002G024000--Sobic003G417100 Sobic006G068800 Sobic006G068800 Sobic002G024000--Sobic006G068800 Sobic007G115500 Sobic007G115500 Sobic002G024000--Sobic007G115500 Sobic002G024000--Sobic010G194100 Sobic002G024000--Sobic002G361200 Sobic006G009000 Sobic006G009000 Sobic002G024000--Sobic006G009000 Sobic002G024000--Sobic009G171600 Sobic003G228200 Sobic003G228200 Sobic002G024000--Sobic003G228200 Sobic010G102150 Sobic010G102150 Sobic009G171600--Sobic010G102150 Sobic007G158500 Sobic007G158500 Sobic009G171600--Sobic007G158500 Sobic009G171600--Sobic002G024000 Sobic004G182300 Sobic004G182300 Sobic009G171600--Sobic004G182300 Sobic010G163000 Sobic010G163000 Sobic009G171600--Sobic010G163000 Sobic004G058000 Sobic004G058000 Sobic009G171600--Sobic004G058000 Sobic007G090300 Sobic007G090300 Sobic009G171600--Sobic007G090300 Sobic009G241700 Sobic009G241700 Sobic009G171600--Sobic009G241700 Sobic005G080200 Sobic005G080200 Sobic009G171600--Sobic005G080200 Sobic010G192900--Sobic006G068800 Sobic002G327100 Sobic002G327100 Sobic010G192900--Sobic002G327100 Sobic003G037500 Sobic003G037500 Sobic010G192900--Sobic003G037500 Sobic004G297900 Sobic004G297900 Sobic010G192900--Sobic004G297900 Sobic010G192900--Sobic006G009000 Sobic006G009100 Sobic006G009100 Sobic010G192900--Sobic006G009100 Sobic010G192900--Sobic003G228200 Sobic006G255400 Sobic006G255400 Sobic010G192900--Sobic006G255400 Sobic010G192900--Sobic003G311800 Sobic003G111100--Sobic003G228200 Sobic001G119500 Sobic001G119500 Sobic003G111100--Sobic001G119500 Sobic003G111100--Sobic007G115500 Sobic009G065300 Sobic009G065300 Sobic003G111100--Sobic009G065300 Sobic003G111100--Sobic002G361200 Sobic002G109400 Sobic002G109400 Sobic003G111100--Sobic002G109400 Sobic003G111100--Sobic010G192900 Sobic003G111100--Sobic002G024000 Sobic003G111100--Sobic002G327100 Sobic004G276100 Sobic004G276100 Sobic007G078100--Sobic004G276100 Sobic002G257300 Sobic002G257300 Sobic007G078100--Sobic002G257300 Sobic007G161400 Sobic007G161400 Sobic007G078100--Sobic007G161400 Sobic010G154700 Sobic010G154700 Sobic007G078100--Sobic010G154700 Sobic004G272800 Sobic004G272800 Sobic007G078100--Sobic004G272800 Sobic004G051700 Sobic004G051700 Sobic007G078100--Sobic004G051700 Sobic005G188100 Sobic005G188100 Sobic007G078100--Sobic005G188100 Sobic001G132100 Sobic001G132100 Sobic007G078100--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic007G078100--Sobic001G048832 Sobic002G407100 Sobic002G407100 Sobic001G432700--Sobic002G407100 Sobic001G432700--Sobic007G127100 Sobic001G403300 Sobic001G403300 Sobic001G432700--Sobic001G403300 Sobic001G432700--Sobic006G068800 Sobic001G432700--Sobic009G065300 Sobic010G195500 Sobic010G195500 Sobic001G432700--Sobic010G195500 Sobic001G432700--Sobic005G080200 Sobic002G327300 Sobic002G327300 Sobic001G432700--Sobic002G327300 Sobic004G302200 Sobic004G302200 Sobic001G432700--Sobic004G302200 Sobic010G194100--Sobic003G417100 Sobic006G256900 Sobic006G256900 Sobic010G194100--Sobic006G256900 Sobic010G194100--Sobic006G274933 Sobic002G185800 Sobic002G185800 Sobic010G194100--Sobic002G185800 Sobic010G194100--Sobic004G262500 Sobic003G404600 Sobic003G404600 Sobic010G194100--Sobic003G404600 Sobic001G176400 Sobic001G176400 Sobic010G194100--Sobic001G176400 Sobic003G280400 Sobic003G280400 Sobic010G194100--Sobic003G280400 Sobic006G230300 Sobic006G230300 Sobic010G194100--Sobic006G230300
Octagon: transcription factors


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