Gene annotation
Transcriptome id Sobic.006G152500.1
Synonym YSL7
Functional annotation -
UniProt C5Y2Q6
Pfam PF03169
Panther DB PTHR31645 PTHR31645:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65730 : YELLOW STRIPE like 7
RAP-DB (Rice) LOC_Os04g44300.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a032072 , Zm00025a057370 , Zm00025a010612 , Zm00025a010614 , Zm00025a035063 , Zm00025a056538 , Zm00025a056537
Brachypodium KQJ82291 , KQJ82292 , KQK00455 , KQJ83669 , KQJ83668 , PNT69110 , PNT61516 , KQJ83671 , PNT60923
Barley HORVU2Hr1G120250.1 , HORVU2Hr1G120250.2 , HORVU2Hr1G070320.23 , HORVU2Hr1G090280.20 , HORVU2Hr1G090280.21 , HORVU2Hr1G090280.9 , HORVU2Hr1G090280.8 , HORVU2Hr1G090280.7 , HORVU2Hr1G090280.6 , HORVU2Hr1G090280.5 , HORVU2Hr1G090280.4 , HORVU2Hr1G090280.3 , HORVU2Hr1G090280.2 , HORVU2Hr1G090280.1 , HORVU6Hr1G059420.4 , HORVU6Hr1G059420.1 , HORVU6Hr1G059420.2 , HORVU6Hr1G059420.3 , HORVU2Hr1G070320.1 , HORVU2Hr1G070320.7 , HORVU2Hr1G070320.4 , HORVU2Hr1G070320.5 , HORVU2Hr1G090240.3 , HORVU2Hr1G090240.2 , HORVU2Hr1G090240.1 , HORVU2Hr1G070320.18 , HORVU2Hr1G070320.19 , HORVU2Hr1G090380.8 , HORVU2Hr1G090380.2 , HORVU2Hr1G090380.3 , HORVU2Hr1G090380.1 , HORVU2Hr1G090380.6 , HORVU2Hr1G090380.7 , HORVU2Hr1G090380.4 , HORVU2Hr1G090380.5 , HORVU2Hr1G070320.22 , HORVU2Hr1G099860.1 , HORVU2Hr1G099860.2 , HORVU2Hr1G099860.3 , HORVU2Hr1G070320.26 , HORVU2Hr1G070300.1 , HORVU2Hr1G070300.2 , HORVU2Hr1G090280.17 , HORVU2Hr1G090280.16 , HORVU2Hr1G090280.15 , HORVU2Hr1G090280.14 , HORVU2Hr1G090280.13 , HORVU2Hr1G090280.12 , HORVU2Hr1G090280.11 , HORVU2Hr1G090280.10 , HORVU2Hr1G090280.19 , HORVU2Hr1G090280.18 , HORVU2Hr1G070320.10 , HORVU2Hr1G070320.11 , HORVU2Hr1G090310.5 , HORVU2Hr1G070320.12 , HORVU2Hr1G090310.1 , HORVU2Hr1G090310.3 , HORVU2Hr1G090310.2 , HORVU2Hr1G090310.4
Wheat TraesCS2D02G283400 , TraesCS2D02G484200 , TraesCS2D02G484200 , TraesCS6D02G214100 , TraesCS2D02G373800 , TraesCS2B02G393600 , TraesCS2A02G484200 , TraesCS2A02G484200 , TraesCS2A02G377400 , TraesCS6A02G220900 , TraesCS2A02G284900 , TraesCS6D02G214300 , TraesCS6B02G262400 , TraesCS2B02G394500 , TraesCS2A02G376700 , TraesCS2D02G373900 , TraesCS2B02G302000 , TraesCS2A02G284700 , TraesCS6A02G221100 , TraesCS2D02G374000 , TraesCS2B02G301800 , TraesCS2D02G081000 , TraesCS2A02G083400 , TraesCS2B02G097400 , TraesCS2B02G097400 , TraesCS2A02G377600 , TraesCS2A02G377200 , TraesCS2D02G283600 , TraesCS2B02G394400 , TraesCS2B02G394600 , TraesCS2D02G373100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G410450 - -
2 Sobic.002G155900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.007G014600 transferase family protein, putative, expressed -
4 Sobic.K020500 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
5 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
6 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
7 Sobic.005G182701 - -
8 Sobic.001G432500 expressed protein -
9 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
10 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
11 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
13 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
14 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
15 Sobic.005G218500 Jacalin-like lectin domain containing protein, putative, expressed -
16 Sobic.002G087500 - -
17 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
18 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
19 Sobic.003G153800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein beta-fructofuranosidase (Os)(PubMedID : 27208977)@neutral/alkaline invertase, putative, expressed -
20 Sobic.005G219000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@patatin, putative, expressed -


Gene co-expression network
sample Sobic006G152500 Sobic006G152500 Sobic001G410450 Sobic001G410450 Sobic006G152500--Sobic001G410450 Sobic002G155900 Sobic002G155900 Sobic006G152500--Sobic002G155900 Sobic007G014600 Sobic007G014600 Sobic006G152500--Sobic007G014600 SobicK020500 SobicK020500 Sobic006G152500--SobicK020500 Sobic007G055600 Sobic007G055600 Sobic006G152500--Sobic007G055600 Sobic007G076000 Sobic007G076000 Sobic006G152500--Sobic007G076000 Sobic005G182701 Sobic005G182701 Sobic006G152500--Sobic005G182701 Sobic001G432500 Sobic001G432500 Sobic006G152500--Sobic001G432500 Sobic001G125700 Sobic001G125700 Sobic006G152500--Sobic001G125700 Sobic001G056400 Sobic001G056400 Sobic001G410450--Sobic001G056400 Sobic001G012000 Sobic001G012000 Sobic001G410450--Sobic001G012000 Sobic001G410450--Sobic005G182701 SobicK044407 SobicK044407 Sobic001G410450--SobicK044407 Sobic002G423600 Sobic002G423600 Sobic001G410450--Sobic002G423600 Sobic001G410450--Sobic007G055600 Sobic004G217700 Sobic004G217700 Sobic001G410450--Sobic004G217700 Sobic006G045000 Sobic006G045000 Sobic001G410450--Sobic006G045000 Sobic001G410450--Sobic007G076000 Sobic001G179100 Sobic001G179100 Sobic002G155900--Sobic001G179100 Sobic003G255100 Sobic003G255100 Sobic002G155900--Sobic003G255100 Sobic003G214000 Sobic003G214000 Sobic002G155900--Sobic003G214000 Sobic002G155900--Sobic006G152500 Sobic010G079700 Sobic010G079700 Sobic002G155900--Sobic010G079700 Sobic009G085900 Sobic009G085900 Sobic002G155900--Sobic009G085900 Sobic002G155900--Sobic001G410450 Sobic002G155900--Sobic004G217700 Sobic002G287000 Sobic002G287000 Sobic002G155900--Sobic002G287000 Sobic002G271600 Sobic002G271600 Sobic007G014600--Sobic002G271600 Sobic004G096300 Sobic004G096300 Sobic007G014600--Sobic004G096300 Sobic006G053700 Sobic006G053700 Sobic007G014600--Sobic006G053700 Sobic001G030500 Sobic001G030500 Sobic007G014600--Sobic001G030500 Sobic002G209100 Sobic002G209100 Sobic007G014600--Sobic002G209100 Sobic009G205600 Sobic009G205600 Sobic007G014600--Sobic009G205600 Sobic007G014600--Sobic003G255100 Sobic007G014600--Sobic006G152500 Sobic003G284300 Sobic003G284300 Sobic007G014600--Sobic003G284300 SobicK020500--Sobic005G182701 SobicK020500--Sobic007G055600 Sobic003G153800 Sobic003G153800 SobicK020500--Sobic003G153800 SobicK020500--Sobic007G076000 SobicK020500--Sobic001G056400 SobicK020500--Sobic001G410450 SobicK020500--Sobic001G125700 Sobic006G005500 Sobic006G005500 SobicK020500--Sobic006G005500 Sobic003G388400 Sobic003G388400 SobicK020500--Sobic003G388400 Sobic007G055600--Sobic005G182701 Sobic007G055600--Sobic007G076000 Sobic007G055600--Sobic006G005500 Sobic007G055600--Sobic001G125700 Sobic009G014600 Sobic009G014600 Sobic007G055600--Sobic009G014600 Sobic007G055600--Sobic001G056400 Sobic002G040400 Sobic002G040400 Sobic007G055600--Sobic002G040400 Sobic008G028600 Sobic008G028600 Sobic007G055600--Sobic008G028600 Sobic009G115400 Sobic009G115400 Sobic007G055600--Sobic009G115400 Sobic007G076000--Sobic007G055600 Sobic007G076000--Sobic005G182701 Sobic007G076000--Sobic006G005500 Sobic007G076000--Sobic001G125700 Sobic007G076000--Sobic002G040400 Sobic007G076000--Sobic008G028600 Sobic007G076000--Sobic009G014600 Sobic005G219000 Sobic005G219000 Sobic007G076000--Sobic005G219000 Sobic006G007650 Sobic006G007650 Sobic007G076000--Sobic006G007650 Sobic005G182701--Sobic007G055600 Sobic005G182701--Sobic007G076000 Sobic005G182701--Sobic001G056400 Sobic005G182701--Sobic006G005500 Sobic005G182701--Sobic001G125700 Sobic005G182701--Sobic009G014600 Sobic005G182701--Sobic009G115400 Sobic009G115300 Sobic009G115300 Sobic005G182701--Sobic009G115300 Sobic005G182701--Sobic001G012000 Sobic001G432500--Sobic008G028600 Sobic001G432500--Sobic002G040400 Sobic002G298400 Sobic002G298400 Sobic001G432500--Sobic002G298400 Sobic002G087500 Sobic002G087500 Sobic001G432500--Sobic002G087500 Sobic001G432500--Sobic005G219000 Sobic001G432500--Sobic006G005500 Sobic002G391700 Sobic002G391700 Sobic001G432500--Sobic002G391700 Sobic001G432500--Sobic001G125700 Sobic001G432500--Sobic007G076000 Sobic001G125700--Sobic006G005500 Sobic001G125700--Sobic005G219000 Sobic005G219100 Sobic005G219100 Sobic001G125700--Sobic005G219100 Sobic001G125700--Sobic008G028600 Sobic001G125700--Sobic007G076000 Sobic001G125700--Sobic002G040400 Sobic006G005400 Sobic006G005400 Sobic001G125700--Sobic006G005400 Sobic001G125700--Sobic007G055600 Sobic006G007100 Sobic006G007100 Sobic001G125700--Sobic006G007100
Octagon: transcription factors


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