Gene annotation
| Transcriptome id | Sobic.005G218500.1 |
|---|---|
| Synonym | Sb05g026950 |
| Functional annotation | Jacalin-like lectin domain containing protein, putative, expressed |
| UniProt | - |
| Pfam | PF03018 |
| Panther DB | PTHR21495 PTHR21495:SF81 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os12g14440.1 : Jacalin-like lectin domain containing protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a012113 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G378301 | - | K17362: acyl-coenzyme A thioesterase 13 |
| 2 | Sobic.002G216500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed | - |
| 3 | Sobic.001G056400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed | K13222: BX1, indole-3-glycerol-phosphate lyase |
| 4 | Sobic.008G075400 | - | - |
| 5 | Sobic.002G160600 | indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed | K01609: indole-3-glycerol phosphate synthase |
| 6 | Sobic.004G220600 | phenylalanine ammonia-lyase, putative, expressed | K10775: phenylalanine ammonia-lyase |
| 7 | Sobic.007G076000 | Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed | K00083: cinnamyl-alcohol dehydrogenase |
| 8 | Sobic.005G182701 | - | - |
| 9 | Sobic.007G055600 | "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed | K14174: beta-farnesene/exo-alpha-bergamotene synthase |
| 10 | Sobic.001G056500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed | K13222: BX1, indole-3-glycerol-phosphate lyase |
| 11 | Sobic.001G012000 | cytochrome P450 71E1, putative, expressed | K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase |
| 12 | Sobic.K044407 | - | - |
| 13 | Sobic.002G202700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed | - |
| 14 | Sobic.004G217700 | enzyme of the cupin superfamily protein, putative, expressed | K06995: uncharacterized protein |
| 15 | Sobic.002G423600 | "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed | K18819: inositol 3-alpha-galactosyltransferase |
| 16 | Sobic.009G115400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 17 | Sobic.010G214200 | OsFBK17 - F-box domain and kelch repeat containing protein, expressed | - |
| 18 | Sobic.003G248901 | - | - |
| 19 | Sobic.009G014600 | Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed | - |
| 20 | Sobic.003G376200 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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