Gene annotation
Transcriptome id Sobic.003G356100.1
Synonym CRR2
Functional annotation CRR2, putative, expressed
UniProt A0A1W0W0F5
Pfam PF13812 PF14432 PF13041 PF01535
Panther DB PTHR24015 PTHR24015:SF582
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46790 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os01g62910.1 : CRR2, putative, expressed
MaizeGDB (Corn) Zm00025a023477
Brachypodium PNT73194
Barley HORVU3Hr1G085770.4 , HORVU3Hr1G085770.1 , HORVU3Hr1G085770.2 , HORVU3Hr1G085770.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G028900 cytochrome c-type biogenesis protein dbsD-like, putative, expressed -
2 Sobic.004G144000 - -
3 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
4 Sobic.009G052700 4Fe-4S binding domain containing protein, expressed -
5 Sobic.010G183400 down-regulated TF in developmental senescence(PubMedID : 27586543)@homeobox domain containing protein, expressed -
6 Sobic.003G334100 zinc finger family protein, putative, expressed -
7 Sobic.004G250200 ORMM1(PubMedID : 24676859)@RNA recognition motif family protein, expressed -
8 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
9 Sobic.006G214700 APO, putative, expressed -
10 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
11 Sobic.010G074100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1270, putative, expressed -
12 Sobic.004G248400 APO, putative, expressed -
13 Sobic.003G245800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoglycerate mutase, putative, expressed -
14 Sobic.010G056300 PPR repeat domain containing protein, putative, expressed -
15 Sobic.010G028000 ribosome-binding factor A, chloroplast precursor, putative, expressed K02834: ribosome-binding factor A
16 Sobic.004G333400 COBW domain containing protein, putative, expressed -
17 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
18 Sobic.001G118400 expressed protein -
19 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.010G062500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3


Gene co-expression network
sample Sobic003G356100 Sobic003G356100 Sobic005G028900 Sobic005G028900 Sobic003G356100--Sobic005G028900 Sobic004G144000 Sobic004G144000 Sobic003G356100--Sobic004G144000 Sobic007G227600 Sobic007G227600 Sobic003G356100--Sobic007G227600 Sobic009G052700 Sobic009G052700 Sobic003G356100--Sobic009G052700 Sobic010G183400 Sobic010G183400 Sobic003G356100--Sobic010G183400 Sobic003G334100 Sobic003G334100 Sobic003G356100--Sobic003G334100 Sobic004G250200 Sobic004G250200 Sobic003G356100--Sobic004G250200 Sobic004G252500 Sobic004G252500 Sobic003G356100--Sobic004G252500 Sobic006G214700 Sobic006G214700 Sobic003G356100--Sobic006G214700 Sobic005G028900--Sobic006G214700 Sobic005G028900--Sobic004G144000 Sobic005G028900--Sobic010G183400 Sobic005G028900--Sobic004G250200 Sobic003G439600 Sobic003G439600 Sobic005G028900--Sobic003G439600 Sobic003G245800 Sobic003G245800 Sobic005G028900--Sobic003G245800 Sobic003G179400 Sobic003G179400 Sobic005G028900--Sobic003G179400 Sobic005G028900--Sobic007G227600 Sobic004G333400 Sobic004G333400 Sobic005G028900--Sobic004G333400 Sobic004G144000--Sobic005G028900 Sobic004G144000--Sobic003G334100 Sobic004G144000--Sobic004G250200 Sobic004G144000--Sobic004G333400 Sobic004G144000--Sobic010G183400 Sobic003G084500 Sobic003G084500 Sobic004G144000--Sobic003G084500 Sobic003G444500 Sobic003G444500 Sobic004G144000--Sobic003G444500 Sobic002G181000 Sobic002G181000 Sobic004G144000--Sobic002G181000 Sobic004G265900 Sobic004G265900 Sobic004G144000--Sobic004G265900 Sobic010G074100 Sobic010G074100 Sobic007G227600--Sobic010G074100 Sobic009G036300 Sobic009G036300 Sobic007G227600--Sobic009G036300 Sobic001G388400 Sobic001G388400 Sobic007G227600--Sobic001G388400 Sobic009G234200 Sobic009G234200 Sobic007G227600--Sobic009G234200 Sobic010G028000 Sobic010G028000 Sobic007G227600--Sobic010G028000 Sobic010G074200 Sobic010G074200 Sobic007G227600--Sobic010G074200 Sobic009G253000 Sobic009G253000 Sobic007G227600--Sobic009G253000 Sobic010G211500 Sobic010G211500 Sobic007G227600--Sobic010G211500 Sobic002G163700 Sobic002G163700 Sobic007G227600--Sobic002G163700 Sobic009G052700--Sobic003G334100 Sobic009G052700--Sobic006G214700 Sobic004G248400 Sobic004G248400 Sobic009G052700--Sobic004G248400 Sobic009G052700--Sobic010G211500 Sobic009G052700--Sobic005G028900 Sobic009G052700--Sobic003G179400 Sobic005G138600 Sobic005G138600 Sobic009G052700--Sobic005G138600 Sobic009G014100 Sobic009G014100 Sobic009G052700--Sobic009G014100 Sobic009G052700--Sobic004G333400 Sobic010G183400--Sobic009G234200 Sobic010G183400--Sobic004G250200 Sobic010G183400--Sobic004G333400 Sobic010G183400--Sobic003G245800 Sobic010G183400--Sobic003G334100 Sobic003G330100 Sobic003G330100 Sobic010G183400--Sobic003G330100 Sobic001G450600 Sobic001G450600 Sobic010G183400--Sobic001G450600 Sobic010G183400--Sobic003G439600 Sobic010G183400--Sobic005G028900 Sobic003G334100--Sobic004G333400 Sobic003G334100--Sobic010G183400 Sobic003G334100--Sobic003G084500 Sobic003G334100--Sobic001G450600 Sobic002G331800 Sobic002G331800 Sobic003G334100--Sobic002G331800 Sobic003G334100--Sobic002G181000 Sobic003G334100--Sobic009G052700 Sobic003G334100--Sobic004G144000 Sobic003G334100--Sobic009G234200 Sobic004G250200--Sobic003G330100 Sobic004G250200--Sobic010G183400 Sobic004G250200--Sobic003G245800 Sobic004G250200--Sobic009G234200 Sobic006G111600 Sobic006G111600 Sobic004G250200--Sobic006G111600 Sobic002G345200 Sobic002G345200 Sobic004G250200--Sobic002G345200 Sobic004G250200--Sobic005G028900 Sobic003G221700 Sobic003G221700 Sobic004G250200--Sobic003G221700 Sobic004G250200--Sobic003G444500 Sobic004G165900 Sobic004G165900 Sobic004G252500--Sobic004G165900 Sobic003G108900 Sobic003G108900 Sobic004G252500--Sobic003G108900 Sobic001G118400 Sobic001G118400 Sobic004G252500--Sobic001G118400 Sobic004G300100 Sobic004G300100 Sobic004G252500--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic004G252500--Sobic010G231500 Sobic006G025400 Sobic006G025400 Sobic004G252500--Sobic006G025400 Sobic003G070900 Sobic003G070900 Sobic004G252500--Sobic003G070900 Sobic009G004100 Sobic009G004100 Sobic004G252500--Sobic009G004100 Sobic003G125900 Sobic003G125900 Sobic004G252500--Sobic003G125900 Sobic006G214700--Sobic003G179400 Sobic006G214700--Sobic001G450600 Sobic006G214700--Sobic002G331800 Sobic006G214700--Sobic005G028900 Sobic006G110900 Sobic006G110900 Sobic006G214700--Sobic006G110900 Sobic006G214700--Sobic004G333400 Sobic003G253300 Sobic003G253300 Sobic006G214700--Sobic003G253300 Sobic008G063200 Sobic008G063200 Sobic006G214700--Sobic008G063200 Sobic010G076800 Sobic010G076800 Sobic006G214700--Sobic010G076800
Octagon: transcription factors


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