Gene annotation
Transcriptome id Sobic.008G081600.1,Sobic.008G081600.2
Synonym Sb08g007730
Functional annotation expressed protein
UniProt C5YTX7
Pfam PF13891
Panther DB PTHR13453 PTHR13453:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0000123; histone acetyltransferase complex


Orthologs (automatic annotation)
TAIR AT2G31600 : -
RAP-DB (Rice) LOC_Os12g12950.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G081600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G056900 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
2 Sobic.006G078600 expressed protein K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
3 Sobic.002G336800 PPR repeat domain containing protein, putative, expressed -
4 Sobic.001G087100 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome C, putative, expressed -
5 Sobic.001G485600 DAG protein, chloroplast precursor, putative, expressed -
6 Sobic.002G378100 DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
7 Sobic.009G096100 endoribonuclease Dicer, putative, expressed -
8 Sobic.002G344500 pentatricopeptide, putative, expressed K18213: proteinaceous RNase P
9 Sobic.002G298100 expressed protein -
10 Sobic.003G030400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA binding protein, putative, expressed K11145: ribonuclease III family protein
11 Sobic.006G185200 RNA polymerase IV subunit, putative, expressed K16250: DNA-directed RNA polymerase IV subunit 1
12 Sobic.005G001300 expressed protein -
13 Sobic.009G213200 PPR repeat domain containing protein, putative, expressed -
14 Sobic.009G251200 expressed protein -
15 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
16 Sobic.001G538800 dual specificity protein phosphatase, putative, expressed -
17 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
18 Sobic.002G191100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
19 Sobic.009G085400 acyl-activating enzyme 14, putative, expressed -
20 Sobic.001G326300 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G081600 Sobic008G081600 Sobic008G056900 Sobic008G056900 Sobic008G081600--Sobic008G056900 Sobic006G078600 Sobic006G078600 Sobic008G081600--Sobic006G078600 Sobic002G336800 Sobic002G336800 Sobic008G081600--Sobic002G336800 Sobic001G087100 Sobic001G087100 Sobic008G081600--Sobic001G087100 Sobic001G485600 Sobic001G485600 Sobic008G081600--Sobic001G485600 Sobic002G378100 Sobic002G378100 Sobic008G081600--Sobic002G378100 Sobic009G096100 Sobic009G096100 Sobic008G081600--Sobic009G096100 Sobic002G344500 Sobic002G344500 Sobic008G081600--Sobic002G344500 Sobic002G298100 Sobic002G298100 Sobic008G081600--Sobic002G298100 Sobic008G056900--Sobic009G096100 Sobic008G056900--Sobic001G485600 Sobic008G056900--Sobic008G081600 Sobic007G000400 Sobic007G000400 Sobic008G056900--Sobic007G000400 Sobic008G056900--Sobic002G344500 Sobic007G197400 Sobic007G197400 Sobic008G056900--Sobic007G197400 Sobic004G227100 Sobic004G227100 Sobic008G056900--Sobic004G227100 Sobic007G077700 Sobic007G077700 Sobic008G056900--Sobic007G077700 Sobic008G056900--Sobic001G087100 Sobic008G152900 Sobic008G152900 Sobic006G078600--Sobic008G152900 Sobic004G018300 Sobic004G018300 Sobic006G078600--Sobic004G018300 Sobic006G078600--Sobic002G336800 Sobic004G219100 Sobic004G219100 Sobic006G078600--Sobic004G219100 Sobic002G158700 Sobic002G158700 Sobic006G078600--Sobic002G158700 Sobic005G013200 Sobic005G013200 Sobic006G078600--Sobic005G013200 Sobic002G278000 Sobic002G278000 Sobic006G078600--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic006G078600--Sobic008G149800 Sobic010G166000 Sobic010G166000 Sobic006G078600--Sobic010G166000 Sobic005G079025 Sobic005G079025 Sobic002G336800--Sobic005G079025 Sobic008G011100 Sobic008G011100 Sobic002G336800--Sobic008G011100 Sobic004G087600 Sobic004G087600 Sobic002G336800--Sobic004G087600 Sobic003G144950 Sobic003G144950 Sobic002G336800--Sobic003G144950 Sobic002G336800--Sobic006G078600 Sobic009G005100 Sobic009G005100 Sobic002G336800--Sobic009G005100 Sobic009G007800 Sobic009G007800 Sobic002G336800--Sobic009G007800 Sobic001G360900 Sobic001G360900 Sobic002G336800--Sobic001G360900 Sobic009G103600 Sobic009G103600 Sobic002G336800--Sobic009G103600 Sobic001G043400 Sobic001G043400 Sobic001G087100--Sobic001G043400 Sobic004G232000 Sobic004G232000 Sobic001G087100--Sobic004G232000 Sobic005G015100 Sobic005G015100 Sobic001G087100--Sobic005G015100 Sobic003G174800 Sobic003G174800 Sobic001G087100--Sobic003G174800 Sobic009G015800 Sobic009G015800 Sobic001G087100--Sobic009G015800 Sobic002G076000 Sobic002G076000 Sobic001G087100--Sobic002G076000 Sobic007G043900 Sobic007G043900 Sobic001G087100--Sobic007G043900 Sobic009G225200 Sobic009G225200 Sobic001G087100--Sobic009G225200 Sobic001G087100--Sobic010G166000 Sobic001G485600--Sobic008G056900 Sobic001G485600--Sobic009G096100 Sobic003G324100 Sobic003G324100 Sobic001G485600--Sobic003G324100 Sobic003G245900 Sobic003G245900 Sobic001G485600--Sobic003G245900 Sobic001G362300 Sobic001G362300 Sobic001G485600--Sobic001G362300 Sobic001G485600--Sobic008G081600 Sobic005G100900 Sobic005G100900 Sobic001G485600--Sobic005G100900 Sobic001G485600--Sobic003G174800 Sobic001G485600--Sobic007G197400 Sobic006G185200 Sobic006G185200 Sobic002G378100--Sobic006G185200 Sobic006G128400 Sobic006G128400 Sobic002G378100--Sobic006G128400 Sobic004G151000 Sobic004G151000 Sobic002G378100--Sobic004G151000 Sobic010G224700 Sobic010G224700 Sobic002G378100--Sobic010G224700 Sobic010G083900 Sobic010G083900 Sobic002G378100--Sobic010G083900 Sobic002G092050 Sobic002G092050 Sobic002G378100--Sobic002G092050 Sobic004G027300 Sobic004G027300 Sobic002G378100--Sobic004G027300 Sobic001G422500 Sobic001G422500 Sobic002G378100--Sobic001G422500 Sobic009G213200 Sobic009G213200 Sobic002G378100--Sobic009G213200 Sobic009G096100--Sobic008G056900 Sobic002G192500 Sobic002G192500 Sobic009G096100--Sobic002G192500 Sobic010G157700 Sobic010G157700 Sobic009G096100--Sobic010G157700 Sobic009G096100--Sobic001G485600 Sobic006G056000 Sobic006G056000 Sobic009G096100--Sobic006G056000 Sobic009G096100--Sobic007G043900 Sobic009G096100--Sobic002G344500 Sobic002G380100 Sobic002G380100 Sobic009G096100--Sobic002G380100 Sobic009G096100--Sobic007G077700 Sobic003G322200 Sobic003G322200 Sobic002G344500--Sobic003G322200 Sobic001G322600 Sobic001G322600 Sobic002G344500--Sobic001G322600 Sobic002G344500--Sobic008G056900 Sobic002G344500--Sobic009G096100 Sobic003G407600 Sobic003G407600 Sobic002G344500--Sobic003G407600 Sobic006G226300 Sobic006G226300 Sobic002G344500--Sobic006G226300 Sobic004G036700 Sobic004G036700 Sobic002G344500--Sobic004G036700 Sobic002G344500--Sobic001G422500 Sobic008G152300 Sobic008G152300 Sobic002G344500--Sobic008G152300 Sobic009G251200 Sobic009G251200 Sobic002G298100--Sobic009G251200 Sobic010G098200 Sobic010G098200 Sobic002G298100--Sobic010G098200 Sobic010G140400 Sobic010G140400 Sobic002G298100--Sobic010G140400 Sobic002G298100--Sobic004G018300 Sobic008G051200 Sobic008G051200 Sobic002G298100--Sobic008G051200 Sobic004G171200 Sobic004G171200 Sobic002G298100--Sobic004G171200 Sobic005G160100 Sobic005G160100 Sobic002G298100--Sobic005G160100 Sobic003G434700 Sobic003G434700 Sobic002G298100--Sobic003G434700 Sobic001G219600 Sobic001G219600 Sobic002G298100--Sobic001G219600
Octagon: transcription factors


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