Gene annotation
Transcriptome id Sobic.001G466800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QPU4
Pfam -
Panther DB PTHR33625 PTHR33625:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54540 : Uncharacterised conserved protein (UCP012943)
RAP-DB (Rice) LOC_Os03g10390.1 : expressed protein
MaizeGDB (Corn) Zm00025a001166
Brachypodium PNT77966 , KQK23073
Barley HORVU4Hr1G070320.1 , HORVU4Hr1G070320.2 , HORVU4Hr1G070320.3
Wheat TraesCS4A02G045100 , TraesCS4D02G259900 , TraesCS4B02G260200
Populus -


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cDNA sequences
Sobic.001G466800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G143500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan water dikinase, chloroplast precursor, putative, expressed K08244: alpha-glucan, water dikinase
2 Sobic.006G089400 cleft lip and palate transmembrane protein 1, putative, expressed -
3 Sobic.003G212100 expressed protein -
4 Sobic.010G158000 dolichyl-phosphate beta-glycosyltransferase, putative, expressed -
5 Sobic.003G297800 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
6 Sobic.003G038400 expressed protein -
7 Sobic.010G272900 - -
8 Sobic.010G255900 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
9 Sobic.001G057400 expressed protein -
10 Sobic.010G176300 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
11 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
12 Sobic.001G538800 dual specificity protein phosphatase, putative, expressed -
13 Sobic.006G207200 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
14 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
15 Sobic.002G406300 nucleolar protein 5A, putative, expressed K14564: nucleolar protein 56
16 Sobic.009G252300 expressed protein -
17 Sobic.004G340632 - -
18 Sobic.007G182000 hydroxymethylglutaryl-CoA synthase("PubMedID : 26759170,PubMedID : 24597475")@hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
19 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
20 Sobic.001G270700 nodulin, putative, expressed -


Gene co-expression network
sample Sobic001G466800 Sobic001G466800 Sobic010G143500 Sobic010G143500 Sobic001G466800--Sobic010G143500 Sobic006G089400 Sobic006G089400 Sobic001G466800--Sobic006G089400 Sobic003G212100 Sobic003G212100 Sobic001G466800--Sobic003G212100 Sobic010G158000 Sobic010G158000 Sobic001G466800--Sobic010G158000 Sobic003G297800 Sobic003G297800 Sobic001G466800--Sobic003G297800 Sobic003G038400 Sobic003G038400 Sobic001G466800--Sobic003G038400 Sobic010G272900 Sobic010G272900 Sobic001G466800--Sobic010G272900 Sobic010G255900 Sobic010G255900 Sobic001G466800--Sobic010G255900 Sobic001G057400 Sobic001G057400 Sobic001G466800--Sobic001G057400 Sobic010G143500--Sobic006G089400 Sobic001G538800 Sobic001G538800 Sobic010G143500--Sobic001G538800 Sobic005G145300 Sobic005G145300 Sobic010G143500--Sobic005G145300 Sobic010G143500--Sobic001G466800 Sobic010G143500--Sobic003G297800 Sobic008G189900 Sobic008G189900 Sobic010G143500--Sobic008G189900 Sobic001G114400 Sobic001G114400 Sobic010G143500--Sobic001G114400 Sobic002G191100 Sobic002G191100 Sobic010G143500--Sobic002G191100 Sobic004G296000 Sobic004G296000 Sobic010G143500--Sobic004G296000 Sobic010G100800 Sobic010G100800 Sobic006G089400--Sobic010G100800 Sobic006G058800 Sobic006G058800 Sobic006G089400--Sobic006G058800 Sobic001G501300 Sobic001G501300 Sobic006G089400--Sobic001G501300 Sobic006G089400--Sobic010G143500 Sobic007G029500 Sobic007G029500 Sobic006G089400--Sobic007G029500 Sobic003G134000 Sobic003G134000 Sobic006G089400--Sobic003G134000 Sobic004G176000 Sobic004G176000 Sobic006G089400--Sobic004G176000 Sobic001G207200 Sobic001G207200 Sobic006G089400--Sobic001G207200 Sobic006G089400--Sobic002G191100 Sobic004G130400 Sobic004G130400 Sobic003G212100--Sobic004G130400 Sobic010G176300 Sobic010G176300 Sobic003G212100--Sobic010G176300 Sobic003G314400 Sobic003G314400 Sobic003G212100--Sobic003G314400 Sobic001G188900 Sobic001G188900 Sobic003G212100--Sobic001G188900 Sobic009G174000 Sobic009G174000 Sobic003G212100--Sobic009G174000 Sobic009G162100 Sobic009G162100 Sobic003G212100--Sobic009G162100 Sobic007G028500 Sobic007G028500 Sobic003G212100--Sobic007G028500 Sobic001G261432 Sobic001G261432 Sobic003G212100--Sobic001G261432 Sobic003G362500 Sobic003G362500 Sobic003G212100--Sobic003G362500 Sobic010G158000--Sobic010G255900 Sobic004G077300 Sobic004G077300 Sobic010G158000--Sobic004G077300 Sobic008G152700 Sobic008G152700 Sobic010G158000--Sobic008G152700 Sobic006G132600 Sobic006G132600 Sobic010G158000--Sobic006G132600 Sobic006G060000 Sobic006G060000 Sobic010G158000--Sobic006G060000 Sobic001G501900 Sobic001G501900 Sobic010G158000--Sobic001G501900 Sobic008G097900 Sobic008G097900 Sobic010G158000--Sobic008G097900 Sobic003G385300 Sobic003G385300 Sobic010G158000--Sobic003G385300 Sobic008G055500 Sobic008G055500 Sobic010G158000--Sobic008G055500 Sobic003G297800--Sobic001G207200 Sobic003G297800--Sobic006G089400 Sobic005G140500 Sobic005G140500 Sobic003G297800--Sobic005G140500 Sobic002G428800 Sobic002G428800 Sobic003G297800--Sobic002G428800 Sobic009G094700 Sobic009G094700 Sobic003G297800--Sobic009G094700 Sobic010G039200 Sobic010G039200 Sobic003G297800--Sobic010G039200 Sobic002G092050 Sobic002G092050 Sobic003G297800--Sobic002G092050 Sobic003G297800--Sobic010G143500 Sobic003G297800--Sobic010G176300 Sobic007G099900 Sobic007G099900 Sobic003G038400--Sobic007G099900 Sobic008G054200 Sobic008G054200 Sobic003G038400--Sobic008G054200 Sobic002G180800 Sobic002G180800 Sobic003G038400--Sobic002G180800 Sobic003G038400--Sobic006G132600 Sobic003G402800 Sobic003G402800 Sobic003G038400--Sobic003G402800 Sobic003G038400--Sobic010G158000 Sobic002G103800 Sobic002G103800 Sobic003G038400--Sobic002G103800 Sobic004G064200 Sobic004G064200 Sobic003G038400--Sobic004G064200 Sobic003G038400--Sobic003G385300 Sobic010G272900--Sobic010G255900 Sobic009G156100 Sobic009G156100 Sobic010G272900--Sobic009G156100 Sobic003G377500 Sobic003G377500 Sobic010G272900--Sobic003G377500 Sobic007G077532 Sobic007G077532 Sobic010G272900--Sobic007G077532 Sobic010G272900--Sobic001G057400 Sobic004G111600 Sobic004G111600 Sobic010G272900--Sobic004G111600 Sobic008G069300 Sobic008G069300 Sobic010G272900--Sobic008G069300 Sobic001G136600 Sobic001G136600 Sobic010G272900--Sobic001G136600 Sobic005G185500 Sobic005G185500 Sobic010G272900--Sobic005G185500 Sobic010G255900--Sobic005G185500 Sobic006G162400 Sobic006G162400 Sobic010G255900--Sobic006G162400 Sobic001G356200 Sobic001G356200 Sobic010G255900--Sobic001G356200 Sobic010G255900--Sobic003G385300 Sobic001G504500 Sobic001G504500 Sobic010G255900--Sobic001G504500 Sobic001G149000 Sobic001G149000 Sobic010G255900--Sobic001G149000 Sobic003G117800 Sobic003G117800 Sobic010G255900--Sobic003G117800 Sobic003G353700 Sobic003G353700 Sobic010G255900--Sobic003G353700 Sobic003G428000 Sobic003G428000 Sobic010G255900--Sobic003G428000 Sobic001G057400--Sobic003G117800 Sobic001G057400--Sobic007G077532 Sobic001G057400--Sobic005G185500 Sobic001G057400--Sobic003G353700 Sobic001G057400--Sobic003G428000 Sobic001G057400--Sobic010G255900 Sobic007G142600 Sobic007G142600 Sobic001G057400--Sobic007G142600 Sobic001G057400--Sobic003G385300 Sobic001G057400--Sobic008G055500
Octagon: transcription factors


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