Gene annotation
Transcriptome id Sobic.001G270700.2
Synonym Sb01g026580
Functional annotation nodulin, putative, expressed
UniProt A0A1B6QLB9
Pfam PF00892
Panther DB PTHR31218:SF51 PTHR31218
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G30340 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os10g12190.1 : nodulin, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5A02G520500 , TraesCS4D02G346500 , TraesCS4D02G346500 , TraesCS5A02G520400 , TraesCS4B02G351800 , TraesCS4B02G351800 , TraesCS4B02G351700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G140400 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
2 Sobic.008G155500 ankyrin repeat domain-containing protein 44, putative, expressed -
3 Sobic.002G304801 - -
4 Sobic.008G056800 expressed protein -
5 Sobic.008G057600 WD-40 repeat family protein, putative, expressed -
6 Sobic.010G202200 - -
7 Sobic.001G226900 zinc finger family protein, putative, expressed -
8 Sobic.010G024400 expressed protein -
9 Sobic.002G102300 - -
10 Sobic.005G225500 expressed protein -
11 Sobic.002G099700 OsFBX195 - F-box domain containing protein, expressed -
12 Sobic.010G141201 - -
13 Sobic.003G213000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
14 Sobic.004G168200 ATPase, AAA family protein, expressed -
15 Sobic.008G071800 - -
16 Sobic.004G217100 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.007G101600 - -
18 Sobic.003G175350 - -
19 Sobic.005G058200 expressed protein -
20 Sobic.002G096600 OsFBX15 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G270700 Sobic001G270700 Sobic004G140400 Sobic004G140400 Sobic001G270700--Sobic004G140400 Sobic008G155500 Sobic008G155500 Sobic001G270700--Sobic008G155500 Sobic002G304801 Sobic002G304801 Sobic001G270700--Sobic002G304801 Sobic008G056800 Sobic008G056800 Sobic001G270700--Sobic008G056800 Sobic008G057600 Sobic008G057600 Sobic001G270700--Sobic008G057600 Sobic010G202200 Sobic010G202200 Sobic001G270700--Sobic010G202200 Sobic001G226900 Sobic001G226900 Sobic001G270700--Sobic001G226900 Sobic010G024400 Sobic010G024400 Sobic001G270700--Sobic010G024400 Sobic002G102300 Sobic002G102300 Sobic001G270700--Sobic002G102300 Sobic004G140400--Sobic002G102300 Sobic005G225500 Sobic005G225500 Sobic004G140400--Sobic005G225500 Sobic007G101600 Sobic007G101600 Sobic004G140400--Sobic007G101600 Sobic008G159701 Sobic008G159701 Sobic004G140400--Sobic008G159701 Sobic004G140400--Sobic002G304801 Sobic004G140400--Sobic010G202200 Sobic001G286900 Sobic001G286900 Sobic004G140400--Sobic001G286900 Sobic003G238250 Sobic003G238250 Sobic004G140400--Sobic003G238250 Sobic002G257001 Sobic002G257001 Sobic004G140400--Sobic002G257001 Sobic008G088500 Sobic008G088500 Sobic008G155500--Sobic008G088500 Sobic002G096600 Sobic002G096600 Sobic008G155500--Sobic002G096600 Sobic005G058000 Sobic005G058000 Sobic008G155500--Sobic005G058000 Sobic008G168500 Sobic008G168500 Sobic008G155500--Sobic008G168500 Sobic005G058200 Sobic005G058200 Sobic008G155500--Sobic005G058200 Sobic001G364300 Sobic001G364300 Sobic008G155500--Sobic001G364300 Sobic005G007200 Sobic005G007200 Sobic008G155500--Sobic005G007200 Sobic001G021200 Sobic001G021200 Sobic008G155500--Sobic001G021200 Sobic009G047900 Sobic009G047900 Sobic008G155500--Sobic009G047900 Sobic007G082300 Sobic007G082300 Sobic002G304801--Sobic007G082300 Sobic002G304801--Sobic005G058200 Sobic004G086900 Sobic004G086900 Sobic002G304801--Sobic004G086900 Sobic002G304801--Sobic005G007200 Sobic007G110800 Sobic007G110800 Sobic002G304801--Sobic007G110800 Sobic002G099700 Sobic002G099700 Sobic002G304801--Sobic002G099700 Sobic005G087732 Sobic005G087732 Sobic002G304801--Sobic005G087732 Sobic007G167950 Sobic007G167950 Sobic002G304801--Sobic007G167950 Sobic010G196700 Sobic010G196700 Sobic002G304801--Sobic010G196700 Sobic008G056800--Sobic002G304801 Sobic003G428500 Sobic003G428500 Sobic008G056800--Sobic003G428500 Sobic008G056800--Sobic002G099700 Sobic008G056800--Sobic001G021200 Sobic008G056800--Sobic008G168500 Sobic008G056800--Sobic002G096600 Sobic008G056800--Sobic005G058000 Sobic002G014300 Sobic002G014300 Sobic008G056800--Sobic002G014300 Sobic008G056800--Sobic008G088500 Sobic008G057600--Sobic002G304801 Sobic010G141201 Sobic010G141201 Sobic008G057600--Sobic010G141201 Sobic008G057600--Sobic008G056800 Sobic010G064200 Sobic010G064200 Sobic008G057600--Sobic010G064200 Sobic002G188300 Sobic002G188300 Sobic008G057600--Sobic002G188300 Sobic002G204500 Sobic002G204500 Sobic008G057600--Sobic002G204500 Sobic008G057600--Sobic001G226900 Sobic008G057600--Sobic002G099700 Sobic006G170500 Sobic006G170500 Sobic008G057600--Sobic006G170500 Sobic009G230800 Sobic009G230800 Sobic010G202200--Sobic009G230800 Sobic006G269101 Sobic006G269101 Sobic010G202200--Sobic006G269101 Sobic008G148600 Sobic008G148600 Sobic010G202200--Sobic008G148600 Sobic008G136601 Sobic008G136601 Sobic010G202200--Sobic008G136601 Sobic001G340800 Sobic001G340800 Sobic010G202200--Sobic001G340800 Sobic006G027601 Sobic006G027601 Sobic010G202200--Sobic006G027601 Sobic005G110424 Sobic005G110424 Sobic010G202200--Sobic005G110424 Sobic003G156900 Sobic003G156900 Sobic010G202200--Sobic003G156900 Sobic008G097966 Sobic008G097966 Sobic010G202200--Sobic008G097966 Sobic001G226900--Sobic008G057600 Sobic003G392275 Sobic003G392275 Sobic001G226900--Sobic003G392275 Sobic001G490950 Sobic001G490950 Sobic001G226900--Sobic001G490950 Sobic001G226900--Sobic008G056800 Sobic001G226900--Sobic002G304801 Sobic001G226900--Sobic002G102300 Sobic001G226900--Sobic002G099700 Sobic010G006800 Sobic010G006800 Sobic001G226900--Sobic010G006800 Sobic004G074900 Sobic004G074900 Sobic001G226900--Sobic004G074900 Sobic010G024400--Sobic010G202200 Sobic010G024400--Sobic009G230800 Sobic003G236000 Sobic003G236000 Sobic010G024400--Sobic003G236000 Sobic004G064200 Sobic004G064200 Sobic010G024400--Sobic004G064200 Sobic001G519600 Sobic001G519600 Sobic010G024400--Sobic001G519600 Sobic010G024400--Sobic006G269101 Sobic010G024400--Sobic008G148600 Sobic010G024400--Sobic005G225500 Sobic001G024400 Sobic001G024400 Sobic010G024400--Sobic001G024400 Sobic002G102300--Sobic010G006800 Sobic002G102300--Sobic007G101600 Sobic002G102300--Sobic003G238250 Sobic002G102300--Sobic001G490950 Sobic002G102300--Sobic004G074900 Sobic002G102300--Sobic003G392275 Sobic002G102300--Sobic004G140400 Sobic002G102300--Sobic001G286900 Sobic007G138000 Sobic007G138000 Sobic002G102300--Sobic007G138000
Octagon: transcription factors


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