Gene annotation
Transcriptome id Sobic.010G024400.3
Synonym
Functional annotation expressed protein
UniProt A0A194YHX9
Pfam PF12274
Panther DB PTHR33326 PTHR33326:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g04470.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G202200 - -
2 Sobic.009G230800 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@inhibiting the nuclear localization of BRASSINOSTEROID INSENSITIVE 2(PubMedID : 28273925)@decreased the cell proliferation rates(PubMedID : 27329702)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
3 Sobic.003G236000 CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
4 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
5 Sobic.001G519600 - -
6 Sobic.006G269101 - -
7 Sobic.008G148600 B3 DNA binding domain containing protein, expressed -
8 Sobic.005G225500 expressed protein -
9 Sobic.001G024400 pectinesterase inhibitor domain containing protein, expressed -
10 Sobic.006G027601 - -
11 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
12 Sobic.008G136601 - -
13 Sobic.005G110424 - -
14 Sobic.001G340800 exocyst complex component 6, putative, expressed -
15 Sobic.006G143700 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
16 Sobic.007G039200 MYB family transcription factor, putative, expressed -
17 Sobic.004G144800 - -
18 Sobic.005G003700 - -
19 Sobic.002G389600 transcription regulator, putative, expressed -
20 Sobic.009G061500 - -


Gene co-expression network
sample Sobic010G024400 Sobic010G024400 Sobic010G202200 Sobic010G202200 Sobic010G024400--Sobic010G202200 Sobic009G230800 Sobic009G230800 Sobic010G024400--Sobic009G230800 Sobic003G236000 Sobic003G236000 Sobic010G024400--Sobic003G236000 Sobic004G064200 Sobic004G064200 Sobic010G024400--Sobic004G064200 Sobic001G519600 Sobic001G519600 Sobic010G024400--Sobic001G519600 Sobic006G269101 Sobic006G269101 Sobic010G024400--Sobic006G269101 Sobic008G148600 Sobic008G148600 Sobic010G024400--Sobic008G148600 Sobic005G225500 Sobic005G225500 Sobic010G024400--Sobic005G225500 Sobic001G024400 Sobic001G024400 Sobic010G024400--Sobic001G024400 Sobic010G202200--Sobic009G230800 Sobic010G202200--Sobic006G269101 Sobic010G202200--Sobic008G148600 Sobic008G136601 Sobic008G136601 Sobic010G202200--Sobic008G136601 Sobic001G340800 Sobic001G340800 Sobic010G202200--Sobic001G340800 Sobic006G027601 Sobic006G027601 Sobic010G202200--Sobic006G027601 Sobic005G110424 Sobic005G110424 Sobic010G202200--Sobic005G110424 Sobic003G156900 Sobic003G156900 Sobic010G202200--Sobic003G156900 Sobic008G097966 Sobic008G097966 Sobic010G202200--Sobic008G097966 Sobic009G230800--Sobic010G202200 Sobic009G230800--Sobic006G269101 Sobic004G052600 Sobic004G052600 Sobic009G230800--Sobic004G052600 Sobic009G230800--Sobic008G136601 Sobic009G230800--Sobic001G340800 Sobic004G328500 Sobic004G328500 Sobic009G230800--Sobic004G328500 Sobic009G230800--Sobic008G148600 Sobic005G000900 Sobic005G000900 Sobic009G230800--Sobic005G000900 Sobic005G221675 Sobic005G221675 Sobic009G230800--Sobic005G221675 Sobic006G001100 Sobic006G001100 Sobic003G236000--Sobic006G001100 Sobic007G226700 Sobic007G226700 Sobic003G236000--Sobic007G226700 Sobic003G236000--Sobic005G225500 Sobic008G159701 Sobic008G159701 Sobic003G236000--Sobic008G159701 Sobic001G220500 Sobic001G220500 Sobic003G236000--Sobic001G220500 Sobic003G236000--Sobic006G027601 Sobic003G236000--Sobic010G202200 Sobic005G148950 Sobic005G148950 Sobic003G236000--Sobic005G148950 Sobic006G032000 Sobic006G032000 Sobic003G236000--Sobic006G032000 Sobic010G114200 Sobic010G114200 Sobic004G064200--Sobic010G114200 Sobic003G014200 Sobic003G014200 Sobic004G064200--Sobic003G014200 Sobic006G143900 Sobic006G143900 Sobic004G064200--Sobic006G143900 Sobic010G179600 Sobic010G179600 Sobic004G064200--Sobic010G179600 Sobic009G068400 Sobic009G068400 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic001G225800 Sobic001G225800 Sobic004G064200--Sobic001G225800 Sobic009G152000 Sobic009G152000 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic001G519600--Sobic009G230800 Sobic001G519600--Sobic010G202200 Sobic008G155500 Sobic008G155500 Sobic001G519600--Sobic008G155500 Sobic001G519600--Sobic001G340800 Sobic009G061500 Sobic009G061500 Sobic001G519600--Sobic009G061500 Sobic001G519600--Sobic006G269101 Sobic006G143700 Sobic006G143700 Sobic001G519600--Sobic006G143700 Sobic001G519600--Sobic008G148600 Sobic001G519600--Sobic010G024400 Sobic006G269101--Sobic008G148600 Sobic007G160501 Sobic007G160501 Sobic006G269101--Sobic007G160501 Sobic003G351100 Sobic003G351100 Sobic006G269101--Sobic003G351100 Sobic001G246001 Sobic001G246001 Sobic006G269101--Sobic001G246001 Sobic005G214800 Sobic005G214800 Sobic006G269101--Sobic005G214800 Sobic002G194300 Sobic002G194300 Sobic006G269101--Sobic002G194300 Sobic009G110800 Sobic009G110800 Sobic006G269101--Sobic009G110800 Sobic008G125801 Sobic008G125801 Sobic006G269101--Sobic008G125801 Sobic002G126400 Sobic002G126400 Sobic006G269101--Sobic002G126400 Sobic008G148600--Sobic006G269101 Sobic001G232600 Sobic001G232600 Sobic008G148600--Sobic001G232600 Sobic008G148600--Sobic008G136601 Sobic001G248700 Sobic001G248700 Sobic008G148600--Sobic001G248700 Sobic001G094700 Sobic001G094700 Sobic008G148600--Sobic001G094700 Sobic005G225500--Sobic006G001100 Sobic005G225500--Sobic008G159701 Sobic002G106600 Sobic002G106600 Sobic005G225500--Sobic002G106600 Sobic005G003700 Sobic005G003700 Sobic005G225500--Sobic005G003700 Sobic007G070900 Sobic007G070900 Sobic005G225500--Sobic007G070900 Sobic004G290600 Sobic004G290600 Sobic005G225500--Sobic004G290600 Sobic004G308800 Sobic004G308800 Sobic005G225500--Sobic004G308800 Sobic007G176900 Sobic007G176900 Sobic005G225500--Sobic007G176900 Sobic006G205400 Sobic006G205400 Sobic005G225500--Sobic006G205400 Sobic001G024400--Sobic006G143700 Sobic001G024400--Sobic008G148600 Sobic001G024400--Sobic006G269101 Sobic001G024400--Sobic010G202200 Sobic001G024400--Sobic009G230800 Sobic001G024400--Sobic008G136601 Sobic001G024400--Sobic005G110424 Sobic001G024400--Sobic006G027601 Sobic003G175000 Sobic003G175000 Sobic001G024400--Sobic003G175000
Octagon: transcription factors


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