Gene annotation
Transcriptome id Sobic.003G213000.1
Synonym SbSWEET3-6, Sb03g027260, AtVEX1,SbSWEET3-6;Sugars Will Eventually Be Exported Transporters
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
Sugar transporter (PubMedID : 27330561)
Sugar transporter (PubMedID : 27330561)
nodulin MtN3 family protein, putative, expressed
UniProt C5XQB8
Pfam PF03083
Panther DB PTHR10791 PTHR10791:SF62
NCBI CDD KOG1623; Multitransmembrane protein
KEGG Orthology K15382; SLC50A, solute carrier family 50 (sugar transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G62850 : Nodulin MtN3 family protein
RAP-DB (Rice) LOC_Os01g42090.1 : nodulin MtN3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a038465 , Zm00025a028643 , Zm00025a019719 , Zm00025a019717
Brachypodium KQK17179 , KQK08642
Barley HORVU4Hr1G070740.1 , HORVU2Hr1G006520.1 , HORVU7Hr1G117490.1 , HORVU7Hr1G067000.1 , HORVU2Hr1G006510.1 , HORVU1Hr1G079940.2 , HORVU1Hr1G079940.3 , HORVU1Hr1G079940.1 , HORVU1Hr1G079940.4 , HORVU1Hr1G079940.5
Wheat TraesCSU02G191700 , TraesCS2D02G052100 , TraesCS2A02G051800 , TraesCSU02G013500 , TraesCS2D02G042600 , TraesCSU02G181700 , TraesCS7B02G410700 , TraesCS2B02G056000 , TraesCS2B02G056000 , TraesCS7B02G410800 , TraesCS2A02G043400 , TraesCSU02G013200 , TraesCSU02G249000 , TraesCSU02G249100 , TraesCS7A02G503300 , TraesCS2B02G055900 , TraesCS1A02G360900 , TraesCS7B02G451200 , TraesCS7D02G521400 , TraesCS7A02G533900 , TraesCS2B02G055800 , TraesCS7A02G159800 , TraesCS3D02G227000 , TraesCS3D02G227000 , TraesCS7A02G503100 , TraesCSU02G232400 , TraesCS1D02G365200 , TraesCSU02G162000 , TraesCS7D02G490600 , TraesCS2B02G056100 , TraesCSU02G013400 , TraesCS7A02G503200 , TraesCS7D02G160600 , TraesCS1B02G377200 , TraesCS2D02G042500
Populus -


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cDNA sequences
Sobic.003G213000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G155500 ankyrin repeat domain-containing protein 44, putative, expressed -
2 Sobic.010G202200 - -
3 Sobic.002G382300 expressed protein -
4 Sobic.001G519600 - -
5 Sobic.009G230800 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@inhibiting the nuclear localization of BRASSINOSTEROID INSENSITIVE 2(PubMedID : 28273925)@decreased the cell proliferation rates(PubMedID : 27329702)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
6 Sobic.010G024400 expressed protein -
7 Sobic.005G110424 - -
8 Sobic.008G100600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
9 Sobic.006G117700 - -
10 Sobic.003G175350 - -
11 Sobic.005G058200 expressed protein -
12 Sobic.007G082300 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.008G088500 amino acid transporter, putative, expressed -
14 Sobic.007G039200 MYB family transcription factor, putative, expressed -
15 Sobic.009G047900 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
16 Sobic.004G086900 - -
17 Sobic.005G007200 DEFL53 - Defensin and Defensin-like DEFL family -
18 Sobic.002G096600 OsFBX15 - F-box domain containing protein, expressed -
19 Sobic.005G058000 expressed protein -
20 Sobic.008G155000 ankyrin, putative, expressed -


Gene co-expression network
sample Sobic003G213000 Sobic003G213000 Sobic008G155500 Sobic008G155500 Sobic003G213000--Sobic008G155500 Sobic010G202200 Sobic010G202200 Sobic003G213000--Sobic010G202200 Sobic002G382300 Sobic002G382300 Sobic003G213000--Sobic002G382300 Sobic001G519600 Sobic001G519600 Sobic003G213000--Sobic001G519600 Sobic009G230800 Sobic009G230800 Sobic003G213000--Sobic009G230800 Sobic010G024400 Sobic010G024400 Sobic003G213000--Sobic010G024400 Sobic005G110424 Sobic005G110424 Sobic003G213000--Sobic005G110424 Sobic008G100600 Sobic008G100600 Sobic003G213000--Sobic008G100600 Sobic006G117700 Sobic006G117700 Sobic003G213000--Sobic006G117700 Sobic008G088500 Sobic008G088500 Sobic008G155500--Sobic008G088500 Sobic002G096600 Sobic002G096600 Sobic008G155500--Sobic002G096600 Sobic005G058000 Sobic005G058000 Sobic008G155500--Sobic005G058000 Sobic008G168500 Sobic008G168500 Sobic008G155500--Sobic008G168500 Sobic005G058200 Sobic005G058200 Sobic008G155500--Sobic005G058200 Sobic001G364300 Sobic001G364300 Sobic008G155500--Sobic001G364300 Sobic005G007200 Sobic005G007200 Sobic008G155500--Sobic005G007200 Sobic001G021200 Sobic001G021200 Sobic008G155500--Sobic001G021200 Sobic009G047900 Sobic009G047900 Sobic008G155500--Sobic009G047900 Sobic010G202200--Sobic009G230800 Sobic006G269101 Sobic006G269101 Sobic010G202200--Sobic006G269101 Sobic008G148600 Sobic008G148600 Sobic010G202200--Sobic008G148600 Sobic008G136601 Sobic008G136601 Sobic010G202200--Sobic008G136601 Sobic001G340800 Sobic001G340800 Sobic010G202200--Sobic001G340800 Sobic006G027601 Sobic006G027601 Sobic010G202200--Sobic006G027601 Sobic010G202200--Sobic005G110424 Sobic003G156900 Sobic003G156900 Sobic010G202200--Sobic003G156900 Sobic008G097966 Sobic008G097966 Sobic010G202200--Sobic008G097966 Sobic006G170500 Sobic006G170500 Sobic002G382300--Sobic006G170500 Sobic004G217100 Sobic004G217100 Sobic002G382300--Sobic004G217100 Sobic002G382300--Sobic009G047900 Sobic010G196700 Sobic010G196700 Sobic002G382300--Sobic010G196700 Sobic002G382300--Sobic008G155500 Sobic006G224400 Sobic006G224400 Sobic002G382300--Sobic006G224400 Sobic007G110800 Sobic007G110800 Sobic002G382300--Sobic007G110800 Sobic007G198900 Sobic007G198900 Sobic002G382300--Sobic007G198900 Sobic004G086900 Sobic004G086900 Sobic002G382300--Sobic004G086900 Sobic001G519600--Sobic009G230800 Sobic001G519600--Sobic010G202200 Sobic001G519600--Sobic008G155500 Sobic001G519600--Sobic001G340800 Sobic009G061500 Sobic009G061500 Sobic001G519600--Sobic009G061500 Sobic001G519600--Sobic006G269101 Sobic006G143700 Sobic006G143700 Sobic001G519600--Sobic006G143700 Sobic001G519600--Sobic008G148600 Sobic001G519600--Sobic010G024400 Sobic009G230800--Sobic010G202200 Sobic009G230800--Sobic006G269101 Sobic004G052600 Sobic004G052600 Sobic009G230800--Sobic004G052600 Sobic009G230800--Sobic008G136601 Sobic009G230800--Sobic001G340800 Sobic004G328500 Sobic004G328500 Sobic009G230800--Sobic004G328500 Sobic009G230800--Sobic008G148600 Sobic005G000900 Sobic005G000900 Sobic009G230800--Sobic005G000900 Sobic005G221675 Sobic005G221675 Sobic009G230800--Sobic005G221675 Sobic010G024400--Sobic010G202200 Sobic010G024400--Sobic009G230800 Sobic003G236000 Sobic003G236000 Sobic010G024400--Sobic003G236000 Sobic004G064200 Sobic004G064200 Sobic010G024400--Sobic004G064200 Sobic010G024400--Sobic001G519600 Sobic010G024400--Sobic006G269101 Sobic010G024400--Sobic008G148600 Sobic005G225500 Sobic005G225500 Sobic010G024400--Sobic005G225500 Sobic001G024400 Sobic001G024400 Sobic010G024400--Sobic001G024400 Sobic005G110424--Sobic003G156900 Sobic005G185900 Sobic005G185900 Sobic005G110424--Sobic005G185900 Sobic005G110424--Sobic008G148600 Sobic005G110424--Sobic009G061500 Sobic005G110424--Sobic006G027601 Sobic005G054401 Sobic005G054401 Sobic005G110424--Sobic005G054401 Sobic003G175000 Sobic003G175000 Sobic005G110424--Sobic003G175000 Sobic005G110424--Sobic008G136601 Sobic001G094700 Sobic001G094700 Sobic005G110424--Sobic001G094700 Sobic008G100600--Sobic005G110424 Sobic008G100600--Sobic010G202200 Sobic010G146000 Sobic010G146000 Sobic008G100600--Sobic010G146000 Sobic008G100600--Sobic001G024400 Sobic001G405100 Sobic001G405100 Sobic008G100600--Sobic001G405100 Sobic008G100600--Sobic003G156900 Sobic008G100600--Sobic010G024400 Sobic004G025900 Sobic004G025900 Sobic008G100600--Sobic004G025900 Sobic008G017850 Sobic008G017850 Sobic008G100600--Sobic008G017850 Sobic004G082800 Sobic004G082800 Sobic006G117700--Sobic004G082800 Sobic006G117700--Sobic010G202200 Sobic006G117700--Sobic001G405100 Sobic006G117700--Sobic003G156900 Sobic006G117700--Sobic006G027601 Sobic006G117700--Sobic005G110424 Sobic006G001100 Sobic006G001100 Sobic006G117700--Sobic006G001100 Sobic006G117700--Sobic001G340800 Sobic006G117700--Sobic009G061500
Octagon: transcription factors


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