Gene annotation
Transcriptome id Sobic.003G212100.1,Sobic.003G212100.2
Synonym Sb03g027180
Functional annotation expressed protein
UniProt A0A1W0VYD1 , C5XQA8
Pfam PF03661
Panther DB PTHR30603 PTHR30603:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G02420 : -
RAP-DB (Rice) LOC_Os01g42010.1 : expressed protein
MaizeGDB (Corn) Zm00025a028635 , Zm00025a044778
Brachypodium PNT72348 , KQK04605 , KQK08627 , KQK08626 , PNT72347
Barley HORVU3Hr1G052820.1 , HORVU3Hr1G052820.2 , HORVU3Hr1G052820.3 , HORVU3Hr1G052820.4 , HORVU3Hr1G052820.5 , HORVU3Hr1G052820.6 , HORVU3Hr1G052820.7 , HORVU3Hr1G052820.8
Wheat TraesCS3A02G215100 , TraesCS3B02G246200 , TraesCS3B02G246200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G130400 OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed K01278: DPP4, dipeptidyl-peptidase 4
2 Sobic.010G176300 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
3 Sobic.003G314400 purple acid phosphatase precursor, putative, expressed -
4 Sobic.001G188900 expressed protein -
5 Sobic.009G174000 expressed protein -
6 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
7 Sobic.007G028500 expressed protein -
8 Sobic.001G261432 - -
9 Sobic.003G362500 WD domain, G-beta repeat domain containing protein, expressed K10570: ERCC8, CKN1, DNA excision repair protein ERCC-8
10 Sobic.005G207400 - -
11 Sobic.006G207200 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
12 Sobic.003G260200 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
13 Sobic.003G316200 transmembrane protein 49, putative, expressed -
14 Sobic.003G102600 K-dependent Na/Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
15 Sobic.002G268800 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
16 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
17 Sobic.002G405400 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative, expressed K01001: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
18 Sobic.006G222100 dehydrogenase, putative, expressed -
19 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
20 Sobic.001G205100 expressed protein -


Gene co-expression network
sample Sobic003G212100 Sobic003G212100 Sobic004G130400 Sobic004G130400 Sobic003G212100--Sobic004G130400 Sobic010G176300 Sobic010G176300 Sobic003G212100--Sobic010G176300 Sobic003G314400 Sobic003G314400 Sobic003G212100--Sobic003G314400 Sobic001G188900 Sobic001G188900 Sobic003G212100--Sobic001G188900 Sobic009G174000 Sobic009G174000 Sobic003G212100--Sobic009G174000 Sobic009G162100 Sobic009G162100 Sobic003G212100--Sobic009G162100 Sobic007G028500 Sobic007G028500 Sobic003G212100--Sobic007G028500 Sobic001G261432 Sobic001G261432 Sobic003G212100--Sobic001G261432 Sobic003G362500 Sobic003G362500 Sobic003G212100--Sobic003G362500 Sobic001G205100 Sobic001G205100 Sobic004G130400--Sobic001G205100 Sobic004G130400--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic004G130400--Sobic005G177700 Sobic009G224000 Sobic009G224000 Sobic004G130400--Sobic009G224000 Sobic001G047600 Sobic001G047600 Sobic004G130400--Sobic001G047600 Sobic003G394200 Sobic003G394200 Sobic004G130400--Sobic003G394200 Sobic001G411900 Sobic001G411900 Sobic004G130400--Sobic001G411900 Sobic008G097900 Sobic008G097900 Sobic004G130400--Sobic008G097900 Sobic004G078700 Sobic004G078700 Sobic004G130400--Sobic004G078700 Sobic001G501300 Sobic001G501300 Sobic010G176300--Sobic001G501300 Sobic010G176300--Sobic003G212100 Sobic001G276200 Sobic001G276200 Sobic010G176300--Sobic001G276200 Sobic002G428800 Sobic002G428800 Sobic010G176300--Sobic002G428800 Sobic003G134000 Sobic003G134000 Sobic010G176300--Sobic003G134000 Sobic006G089400 Sobic006G089400 Sobic010G176300--Sobic006G089400 Sobic001G070700 Sobic001G070700 Sobic010G176300--Sobic001G070700 Sobic004G318000 Sobic004G318000 Sobic010G176300--Sobic004G318000 Sobic010G100800 Sobic010G100800 Sobic010G176300--Sobic010G100800 Sobic003G314400--Sobic003G212100 Sobic003G314400--Sobic010G176300 Sobic008G176000 Sobic008G176000 Sobic003G314400--Sobic008G176000 Sobic008G171400 Sobic008G171400 Sobic003G314400--Sobic008G171400 Sobic002G291400 Sobic002G291400 Sobic003G314400--Sobic002G291400 Sobic003G314400--Sobic004G130400 Sobic004G244000 Sobic004G244000 Sobic003G314400--Sobic004G244000 Sobic010G273000 Sobic010G273000 Sobic003G314400--Sobic010G273000 Sobic008G037700 Sobic008G037700 Sobic003G314400--Sobic008G037700 Sobic003G156400 Sobic003G156400 Sobic001G188900--Sobic003G156400 Sobic001G188900--Sobic004G130400 Sobic003G338500 Sobic003G338500 Sobic001G188900--Sobic003G338500 Sobic007G075500 Sobic007G075500 Sobic001G188900--Sobic007G075500 Sobic001G188900--Sobic001G205100 Sobic001G188900--Sobic003G212100 Sobic002G405400 Sobic002G405400 Sobic001G188900--Sobic002G405400 Sobic001G188900--Sobic009G224000 Sobic009G235600 Sobic009G235600 Sobic001G188900--Sobic009G235600 Sobic001G431000 Sobic001G431000 Sobic009G174000--Sobic001G431000 Sobic005G155800 Sobic005G155800 Sobic009G174000--Sobic005G155800 Sobic001G413200 Sobic001G413200 Sobic009G174000--Sobic001G413200 Sobic007G203300 Sobic007G203300 Sobic009G174000--Sobic007G203300 Sobic003G102600 Sobic003G102600 Sobic009G174000--Sobic003G102600 Sobic010G230600 Sobic010G230600 Sobic009G174000--Sobic010G230600 Sobic004G253900 Sobic004G253900 Sobic009G174000--Sobic004G253900 Sobic006G087400 Sobic006G087400 Sobic009G174000--Sobic006G087400 Sobic004G227300 Sobic004G227300 Sobic009G174000--Sobic004G227300 Sobic007G172700 Sobic007G172700 Sobic009G162100--Sobic007G172700 Sobic006G060000 Sobic006G060000 Sobic009G162100--Sobic006G060000 Sobic002G355800 Sobic002G355800 Sobic009G162100--Sobic002G355800 Sobic003G058500 Sobic003G058500 Sobic009G162100--Sobic003G058500 Sobic009G162100--Sobic001G047600 Sobic001G253300 Sobic001G253300 Sobic009G162100--Sobic001G253300 Sobic001G475300 Sobic001G475300 Sobic009G162100--Sobic001G475300 Sobic003G181700 Sobic003G181700 Sobic009G162100--Sobic003G181700 Sobic002G200000 Sobic002G200000 Sobic009G162100--Sobic002G200000 Sobic002G395500 Sobic002G395500 Sobic007G028500--Sobic002G395500 Sobic002G238400 Sobic002G238400 Sobic007G028500--Sobic002G238400 Sobic007G028500--Sobic003G156400 Sobic007G028500--Sobic002G355800 Sobic004G186900 Sobic004G186900 Sobic007G028500--Sobic004G186900 Sobic007G028500--Sobic002G200000 Sobic006G012700 Sobic006G012700 Sobic007G028500--Sobic006G012700 Sobic008G087900 Sobic008G087900 Sobic007G028500--Sobic008G087900 Sobic001G465400 Sobic001G465400 Sobic007G028500--Sobic001G465400 Sobic005G207400 Sobic005G207400 Sobic001G261432--Sobic005G207400 Sobic008G168200 Sobic008G168200 Sobic001G261432--Sobic008G168200 Sobic001G261432--Sobic004G130400 Sobic002G294100 Sobic002G294100 Sobic001G261432--Sobic002G294100 Sobic001G261432--Sobic003G212100 Sobic001G261432--Sobic002G238400 Sobic004G025300 Sobic004G025300 Sobic001G261432--Sobic004G025300 Sobic001G261432--Sobic006G087400 Sobic001G261432--Sobic001G205100 Sobic003G274800 Sobic003G274800 Sobic003G362500--Sobic003G274800 Sobic003G077900 Sobic003G077900 Sobic003G362500--Sobic003G077900 Sobic006G213800 Sobic006G213800 Sobic003G362500--Sobic006G213800 Sobic001G014800 Sobic001G014800 Sobic003G362500--Sobic001G014800 Sobic006G201800 Sobic006G201800 Sobic003G362500--Sobic006G201800 Sobic003G261500 Sobic003G261500 Sobic003G362500--Sobic003G261500 Sobic010G000900 Sobic010G000900 Sobic003G362500--Sobic010G000900 Sobic005G111900 Sobic005G111900 Sobic003G362500--Sobic005G111900 Sobic003G217400 Sobic003G217400 Sobic003G362500--Sobic003G217400
Octagon: transcription factors


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