Gene annotation
Transcriptome id Sobic.003G260200.1
Synonym Sb03g031420
Functional annotation MATE efflux family protein, putative, expressed
UniProt C5XGT1
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF139
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT1G71140 : MATE efflux family protein
RAP-DB (Rice) LOC_Os01g49120.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a028010
Brachypodium KQK09220
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G212100 expressed protein -
2 Sobic.003G102600 K-dependent Na/Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
3 Sobic.003G299000 protein of unknown function DUF1421 domain containing protein, expressed -
4 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
5 Sobic.001G538600 rhodanese, putative, expressed K18065: Cdc25 family phosphatase
6 Sobic.003G362500 WD domain, G-beta repeat domain containing protein, expressed K10570: ERCC8, CKN1, DNA excision repair protein ERCC-8
7 Sobic.003G185500 expressed protein -
8 Sobic.004G106700 WD domain, G-beta repeat domain containing protein, expressed K13341: PEX7, peroxin-7
9 Sobic.001G188900 expressed protein -
10 Sobic.003G273900 mitochondrial carrier protein, putative, expressed -
11 Sobic.006G222100 dehydrogenase, putative, expressed -
12 Sobic.001G444300 expressed protein -
13 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
14 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
15 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
16 Sobic.003G105101 - K13628: iron-sulfur cluster assembly protein
17 Sobic.001G060300 expressed protein -
18 Sobic.003G277000 expressed protein -
19 Sobic.009G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
20 Sobic.003G305100 expressed protein -


Gene co-expression network
sample Sobic003G260200 Sobic003G260200 Sobic003G212100 Sobic003G212100 Sobic003G260200--Sobic003G212100 Sobic003G102600 Sobic003G102600 Sobic003G260200--Sobic003G102600 Sobic003G299000 Sobic003G299000 Sobic003G260200--Sobic003G299000 Sobic004G244000 Sobic004G244000 Sobic003G260200--Sobic004G244000 Sobic001G538600 Sobic001G538600 Sobic003G260200--Sobic001G538600 Sobic003G362500 Sobic003G362500 Sobic003G260200--Sobic003G362500 Sobic003G185500 Sobic003G185500 Sobic003G260200--Sobic003G185500 Sobic004G106700 Sobic004G106700 Sobic003G260200--Sobic004G106700 Sobic001G188900 Sobic001G188900 Sobic003G260200--Sobic001G188900 Sobic004G130400 Sobic004G130400 Sobic003G212100--Sobic004G130400 Sobic010G176300 Sobic010G176300 Sobic003G212100--Sobic010G176300 Sobic003G314400 Sobic003G314400 Sobic003G212100--Sobic003G314400 Sobic003G212100--Sobic001G188900 Sobic009G174000 Sobic009G174000 Sobic003G212100--Sobic009G174000 Sobic009G162100 Sobic009G162100 Sobic003G212100--Sobic009G162100 Sobic007G028500 Sobic007G028500 Sobic003G212100--Sobic007G028500 Sobic001G261432 Sobic001G261432 Sobic003G212100--Sobic001G261432 Sobic003G212100--Sobic003G362500 Sobic007G014900 Sobic007G014900 Sobic003G102600--Sobic007G014900 Sobic001G378200 Sobic001G378200 Sobic003G102600--Sobic001G378200 Sobic006G109700 Sobic006G109700 Sobic003G102600--Sobic006G109700 Sobic006G029000 Sobic006G029000 Sobic003G102600--Sobic006G029000 Sobic001G332300 Sobic001G332300 Sobic003G102600--Sobic001G332300 Sobic009G051700 Sobic009G051700 Sobic003G102600--Sobic009G051700 Sobic003G102600--Sobic009G174000 Sobic001G444300 Sobic001G444300 Sobic003G102600--Sobic001G444300 Sobic003G127300 Sobic003G127300 Sobic003G102600--Sobic003G127300 Sobic003G077900 Sobic003G077900 Sobic003G299000--Sobic003G077900 Sobic004G348900 Sobic004G348900 Sobic003G299000--Sobic004G348900 Sobic001G206900 Sobic001G206900 Sobic003G299000--Sobic001G206900 Sobic003G436300 Sobic003G436300 Sobic003G299000--Sobic003G436300 Sobic004G227300 Sobic004G227300 Sobic003G299000--Sobic004G227300 Sobic001G417900 Sobic001G417900 Sobic003G299000--Sobic001G417900 Sobic002G418700 Sobic002G418700 Sobic003G299000--Sobic002G418700 Sobic003G217400 Sobic003G217400 Sobic003G299000--Sobic003G217400 Sobic002G242200 Sobic002G242200 Sobic003G299000--Sobic002G242200 Sobic004G297700 Sobic004G297700 Sobic004G244000--Sobic004G297700 Sobic002G186300 Sobic002G186300 Sobic004G244000--Sobic002G186300 Sobic003G034900 Sobic003G034900 Sobic004G244000--Sobic003G034900 Sobic007G171500 Sobic007G171500 Sobic004G244000--Sobic007G171500 Sobic007G119600 Sobic007G119600 Sobic004G244000--Sobic007G119600 Sobic001G458800 Sobic001G458800 Sobic004G244000--Sobic001G458800 Sobic001G457000 Sobic001G457000 Sobic004G244000--Sobic001G457000 Sobic009G224400 Sobic009G224400 Sobic004G244000--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic004G244000--Sobic006G058900 Sobic003G305100 Sobic003G305100 Sobic001G538600--Sobic003G305100 Sobic003G277000 Sobic003G277000 Sobic001G538600--Sobic003G277000 Sobic004G351500 Sobic004G351500 Sobic001G538600--Sobic004G351500 Sobic002G078400 Sobic002G078400 Sobic001G538600--Sobic002G078400 Sobic001G364500 Sobic001G364500 Sobic001G538600--Sobic001G364500 Sobic004G262300 Sobic004G262300 Sobic001G538600--Sobic004G262300 Sobic009G168000 Sobic009G168000 Sobic001G538600--Sobic009G168000 Sobic001G095632 Sobic001G095632 Sobic001G538600--Sobic001G095632 Sobic001G087900 Sobic001G087900 Sobic001G538600--Sobic001G087900 Sobic003G274800 Sobic003G274800 Sobic003G362500--Sobic003G274800 Sobic003G362500--Sobic003G077900 Sobic006G213800 Sobic006G213800 Sobic003G362500--Sobic006G213800 Sobic001G014800 Sobic001G014800 Sobic003G362500--Sobic001G014800 Sobic006G201800 Sobic006G201800 Sobic003G362500--Sobic006G201800 Sobic003G261500 Sobic003G261500 Sobic003G362500--Sobic003G261500 Sobic010G000900 Sobic010G000900 Sobic003G362500--Sobic010G000900 Sobic005G111900 Sobic005G111900 Sobic003G362500--Sobic005G111900 Sobic003G362500--Sobic003G217400 Sobic001G031900 Sobic001G031900 Sobic003G185500--Sobic001G031900 Sobic003G185500--Sobic006G058900 Sobic003G141700 Sobic003G141700 Sobic003G185500--Sobic003G141700 Sobic004G170400 Sobic004G170400 Sobic003G185500--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic003G185500--Sobic001G074700 Sobic007G114200 Sobic007G114200 Sobic003G185500--Sobic007G114200 Sobic003G185500--Sobic007G171500 Sobic007G019100 Sobic007G019100 Sobic003G185500--Sobic007G019100 Sobic001G342200 Sobic001G342200 Sobic003G185500--Sobic001G342200 Sobic001G110300 Sobic001G110300 Sobic004G106700--Sobic001G110300 Sobic004G106700--Sobic003G305100 Sobic001G060300 Sobic001G060300 Sobic004G106700--Sobic001G060300 Sobic001G451901 Sobic001G451901 Sobic004G106700--Sobic001G451901 Sobic006G231500 Sobic006G231500 Sobic004G106700--Sobic006G231500 Sobic010G194200 Sobic010G194200 Sobic004G106700--Sobic010G194200 Sobic001G129400 Sobic001G129400 Sobic004G106700--Sobic001G129400 Sobic004G106700--Sobic004G244000 Sobic009G024500 Sobic009G024500 Sobic004G106700--Sobic009G024500 Sobic003G156400 Sobic003G156400 Sobic001G188900--Sobic003G156400 Sobic001G188900--Sobic004G130400 Sobic003G338500 Sobic003G338500 Sobic001G188900--Sobic003G338500 Sobic007G075500 Sobic007G075500 Sobic001G188900--Sobic007G075500 Sobic001G205100 Sobic001G205100 Sobic001G188900--Sobic001G205100 Sobic001G188900--Sobic003G212100 Sobic002G405400 Sobic002G405400 Sobic001G188900--Sobic002G405400 Sobic009G224000 Sobic009G224000 Sobic001G188900--Sobic009G224000 Sobic009G235600 Sobic009G235600 Sobic001G188900--Sobic009G235600
Octagon: transcription factors


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