Gene annotation
Transcriptome id Sobic.008G015300.1,Sobic.008G015300.4
Synonym BAT1, Sb08g001350
Functional annotation amino acid permease family protein, putative, expressed
UniProt C5YQL6 , A0A1Z5R503
Pfam PF00324
Panther DB PTHR11785 PTHR11785:SF367 PTHR11785:SF367 PTHR11785
NCBI CDD KOG1287; Amino acid transporters KOG1289Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport GO:0003333amino acid transmembrane transport GO:0015171amino acid transmembrane transporter activity GO:0006810transport GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT2G01170 : bidirectional amino acid transporter 1
RAP-DB (Rice) LOC_Os01g42234.2 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029022 , Zm00025a028664 , Zm00025a038470
Brachypodium KQK03895
Barley HORVU3Hr1G053090.14 , HORVU3Hr1G053090.15 , HORVU3Hr1G053090.18 , HORVU3Hr1G053090.19 , HORVU3Hr1G053090.17 , HORVU3Hr1G053090.10 , HORVU3Hr1G053090.11 , HORVU3Hr1G053090.13 , HORVU3Hr1G053090.12 , HORVU3Hr1G105870.8 , HORVU3Hr1G105870.5 , HORVU3Hr1G105870.6 , HORVU3Hr1G105870.7 , HORVU3Hr1G105870.9 , HORVU3Hr1G105870.3 , HORVU3Hr1G105870.14 , HORVU3Hr1G105870.12 , HORVU3Hr1G105870.13 , HORVU3Hr1G105870.10 , HORVU3Hr1G105870.11 , HORVU3Hr1G017330.12 , HORVU3Hr1G017330.13 , HORVU3Hr1G017330.11 , HORVU3Hr1G017330.10 , HORVU3Hr1G053090.4 , HORVU3Hr1G053090.5 , HORVU3Hr1G017330.9 , HORVU3Hr1G017330.8 , HORVU3Hr1G053090.8 , HORVU3Hr1G053090.1 , HORVU3Hr1G017330.3 , HORVU3Hr1G017330.2 , HORVU3Hr1G017330.1 , HORVU3Hr1G053090.9 , HORVU3Hr1G017330.7 , HORVU3Hr1G017330.6 , HORVU3Hr1G017330.4
Wheat TraesCS3D02G480000 , TraesCS3A02G484600 , TraesCS3A02G096000 , TraesCS3D02G219100 , TraesCS3D02G219100 , TraesCS3A02G484700 , TraesCS3B02G111600 , TraesCS3B02G247500 , TraesCS3B02G247500 , TraesCS3B02G531700 , TraesCS3A02G217200 , TraesCS3A02G217200 , TraesCS3D02G096500 , TraesCS3D02G480100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.002G074300 - -
3 Sobic.010G270900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.005G046500 protein kinase family protein, putative, expressed -
5 Sobic.001G015300 expressed protein -
6 Sobic.003G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.006G241200 expressed protein -
8 Sobic.006G051100 expressed protein -
9 Sobic.004G011566 - K03781: katE, CAT, catB, catalase
10 Sobic.007G129100 - -
11 Sobic.003G006800 expressed protein -
12 Sobic.003G163500 Electron carrierprotein disulfide oxidoreductase (At)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
13 Sobic.008G118000 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C11 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
14 Sobic.005G076000 expressed protein -
15 Sobic.008G101500 powdery mildew resistance protein PM3b, putative, expressed -
16 Sobic.009G002500 polygalacturonase inhibitor precursor, putative, expressed -
17 Sobic.004G055600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
18 Sobic.006G214400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
19 Sobic.010G244500 expressed protein -
20 Sobic.009G085400 acyl-activating enzyme 14, putative, expressed -


Gene co-expression network
sample Sobic008G015300 Sobic008G015300 Sobic003G178700 Sobic003G178700 Sobic008G015300--Sobic003G178700 Sobic002G074300 Sobic002G074300 Sobic008G015300--Sobic002G074300 Sobic010G270900 Sobic010G270900 Sobic008G015300--Sobic010G270900 Sobic005G046500 Sobic005G046500 Sobic008G015300--Sobic005G046500 Sobic001G015300 Sobic001G015300 Sobic008G015300--Sobic001G015300 Sobic003G089600 Sobic003G089600 Sobic008G015300--Sobic003G089600 Sobic006G241200 Sobic006G241200 Sobic008G015300--Sobic006G241200 Sobic006G051100 Sobic006G051100 Sobic008G015300--Sobic006G051100 Sobic004G011566 Sobic004G011566 Sobic008G015300--Sobic004G011566 Sobic003G178700--Sobic008G015300 Sobic003G163500 Sobic003G163500 Sobic003G178700--Sobic003G163500 Sobic003G178700--Sobic005G046500 Sobic009G002500 Sobic009G002500 Sobic003G178700--Sobic009G002500 Sobic008G101500 Sobic008G101500 Sobic003G178700--Sobic008G101500 Sobic008G118000 Sobic008G118000 Sobic003G178700--Sobic008G118000 Sobic005G076000 Sobic005G076000 Sobic003G178700--Sobic005G076000 Sobic007G129100 Sobic007G129100 Sobic003G178700--Sobic007G129100 Sobic009G213400 Sobic009G213400 Sobic003G178700--Sobic009G213400 Sobic002G074300--Sobic010G270900 Sobic002G074300--Sobic008G015300 Sobic002G074300--Sobic003G178700 Sobic002G074300--Sobic006G241200 Sobic005G085200 Sobic005G085200 Sobic002G074300--Sobic005G085200 Sobic002G074300--Sobic008G101500 Sobic002G074300--Sobic004G011566 Sobic009G064766 Sobic009G064766 Sobic002G074300--Sobic009G064766 Sobic008G013900 Sobic008G013900 Sobic002G074300--Sobic008G013900 Sobic010G270900--Sobic006G241200 Sobic010G270900--Sobic002G074300 Sobic010G270900--Sobic008G013900 Sobic010G143400 Sobic010G143400 Sobic010G270900--Sobic010G143400 Sobic010G270900--Sobic008G015300 Sobic001G164200 Sobic001G164200 Sobic010G270900--Sobic001G164200 Sobic009G197000 Sobic009G197000 Sobic010G270900--Sobic009G197000 Sobic010G270900--Sobic004G011566 Sobic010G270900--Sobic005G085200 Sobic005G046500--Sobic003G178700 Sobic009G085400 Sobic009G085400 Sobic005G046500--Sobic009G085400 Sobic009G004700 Sobic009G004700 Sobic005G046500--Sobic009G004700 Sobic006G214400 Sobic006G214400 Sobic005G046500--Sobic006G214400 Sobic006G180432 Sobic006G180432 Sobic005G046500--Sobic006G180432 Sobic009G045700 Sobic009G045700 Sobic005G046500--Sobic009G045700 Sobic001G497200 Sobic001G497200 Sobic005G046500--Sobic001G497200 Sobic009G078500 Sobic009G078500 Sobic005G046500--Sobic009G078500 Sobic005G046500--Sobic009G002500 Sobic001G015300--Sobic007G129100 Sobic002G051300 Sobic002G051300 Sobic001G015300--Sobic002G051300 Sobic001G015300--Sobic005G085200 Sobic001G015300--Sobic003G178700 Sobic010G270300 Sobic010G270300 Sobic001G015300--Sobic010G270300 Sobic003G400266 Sobic003G400266 Sobic001G015300--Sobic003G400266 Sobic001G015300--Sobic009G078500 Sobic002G213800 Sobic002G213800 Sobic001G015300--Sobic002G213800 Sobic001G015300--Sobic010G270900 Sobic003G107300 Sobic003G107300 Sobic003G089600--Sobic003G107300 Sobic010G244500 Sobic010G244500 Sobic003G089600--Sobic010G244500 Sobic003G089600--Sobic008G015300 Sobic003G089600--Sobic002G074300 Sobic003G089600--Sobic004G011566 Sobic003G089600--Sobic010G270900 Sobic001G093600 Sobic001G093600 Sobic003G089600--Sobic001G093600 Sobic009G154600 Sobic009G154600 Sobic003G089600--Sobic009G154600 Sobic004G055600 Sobic004G055600 Sobic003G089600--Sobic004G055600 Sobic006G241200--Sobic010G270900 Sobic009G159700 Sobic009G159700 Sobic006G241200--Sobic009G159700 Sobic006G241200--Sobic008G013900 Sobic006G241200--Sobic005G085200 Sobic002G279100 Sobic002G279100 Sobic006G241200--Sobic002G279100 Sobic004G216700 Sobic004G216700 Sobic006G241200--Sobic004G216700 Sobic007G189800 Sobic007G189800 Sobic006G241200--Sobic007G189800 Sobic009G162401 Sobic009G162401 Sobic006G241200--Sobic009G162401 Sobic006G241200--Sobic009G197000 Sobic003G320600 Sobic003G320600 Sobic006G051100--Sobic003G320600 Sobic003G123300 Sobic003G123300 Sobic006G051100--Sobic003G123300 Sobic006G051100--Sobic001G093600 Sobic006G051100--Sobic003G107300 Sobic006G279700 Sobic006G279700 Sobic006G051100--Sobic006G279700 Sobic006G051100--Sobic003G178700 Sobic002G367700 Sobic002G367700 Sobic006G051100--Sobic002G367700 Sobic001G225500 Sobic001G225500 Sobic006G051100--Sobic001G225500 Sobic001G191200 Sobic001G191200 Sobic006G051100--Sobic001G191200 Sobic010G258300 Sobic010G258300 Sobic004G011566--Sobic010G258300 Sobic004G011566--Sobic009G154600 Sobic003G222300 Sobic003G222300 Sobic004G011566--Sobic003G222300 Sobic004G011566--Sobic010G270900 Sobic004G011566--Sobic001G191200 Sobic003G222600 Sobic003G222600 Sobic004G011566--Sobic003G222600 Sobic004G070200 Sobic004G070200 Sobic004G011566--Sobic004G070200 Sobic001G031300 Sobic001G031300 Sobic004G011566--Sobic001G031300 Sobic004G011566--Sobic002G074300
Octagon: transcription factors


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