Gene annotation
Transcriptome id Sobic.001G261408.2,Sobic.001G261408.1
Synonym -
Functional annotation -
UniProt A0A1Z5S7G2 , C6JRU7
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT4G08290 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os10g14920.2,LOC_Os10g14920.1 : integral membrane protein DUF6 containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7B02G393200 , TraesCS7A02G490000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
2 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
4 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
5 Sobic.003G003600 similar to Nodule inception protein-like(PubMedID : 29862293)@NIN, putative, expressed -
6 Sobic.008G001000 AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
7 Sobic.008G117000 expressed protein K13457: RPM1, disease resistance protein RPM1
8 Sobic.003G342100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroflavonol-4-reductase, putative, expressed -
9 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
10 Sobic.001G433000 FAR1 family protein, expressed -
11 Sobic.004G270600 MYB family transcription factor, putative, expressed -
12 Sobic.006G064100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
13 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
14 Sobic.001G491200 ABC transporter family protein, putative, expressed -
15 Sobic.001G105200 - K14810: DDX56, ATP-dependent RNA helicase DDX56/DBP9
16 Sobic.009G242100 chloroplast unusual positioning protein, putative, expressed -
17 Sobic.003G442700 - -
18 Sobic.001G418700 SLT1 protein, putative, expressed -
19 Sobic.003G161000 powdery mildew resistance protein PM3F, putative, expressed -
20 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -


Gene co-expression network
sample Sobic001G261408 Sobic001G261408 Sobic001G073900 Sobic001G073900 Sobic001G261408--Sobic001G073900 Sobic002G049600 Sobic002G049600 Sobic001G261408--Sobic002G049600 Sobic003G332700 Sobic003G332700 Sobic001G261408--Sobic003G332700 Sobic004G235600 Sobic004G235600 Sobic001G261408--Sobic004G235600 Sobic003G003600 Sobic003G003600 Sobic001G261408--Sobic003G003600 Sobic008G001000 Sobic008G001000 Sobic001G261408--Sobic008G001000 Sobic008G117000 Sobic008G117000 Sobic001G261408--Sobic008G117000 Sobic003G342100 Sobic003G342100 Sobic001G261408--Sobic003G342100 Sobic010G205100 Sobic010G205100 Sobic001G261408--Sobic010G205100 Sobic001G073900--Sobic003G332700 Sobic008G001900 Sobic008G001900 Sobic001G073900--Sobic008G001900 Sobic001G073900--Sobic008G117000 Sobic001G073900--Sobic003G342100 Sobic001G065600 Sobic001G065600 Sobic001G073900--Sobic001G065600 Sobic001G531500 Sobic001G531500 Sobic001G073900--Sobic001G531500 Sobic005G001700 Sobic005G001700 Sobic001G073900--Sobic005G001700 Sobic001G073900--Sobic004G235600 Sobic001G073900--Sobic002G049600 Sobic002G049600--Sobic001G073900 Sobic008G033200 Sobic008G033200 Sobic002G049600--Sobic008G033200 Sobic002G049600--Sobic008G117000 Sobic003G036200 Sobic003G036200 Sobic002G049600--Sobic003G036200 Sobic002G049600--Sobic003G332700 Sobic003G426700 Sobic003G426700 Sobic002G049600--Sobic003G426700 Sobic002G049600--Sobic001G261408 Sobic009G242100 Sobic009G242100 Sobic002G049600--Sobic009G242100 Sobic002G049600--Sobic003G342100 Sobic003G332700--Sobic001G073900 Sobic003G332700--Sobic008G001900 Sobic003G332700--Sobic008G117000 Sobic001G530900 Sobic001G530900 Sobic003G332700--Sobic001G530900 Sobic003G332700--Sobic004G235600 Sobic003G332700--Sobic001G531500 Sobic003G442700 Sobic003G442700 Sobic003G332700--Sobic003G442700 Sobic010G085100 Sobic010G085100 Sobic003G332700--Sobic010G085100 Sobic005G118400 Sobic005G118400 Sobic003G332700--Sobic005G118400 Sobic004G235600--Sobic008G001900 Sobic004G235600--Sobic001G073900 Sobic004G235600--Sobic003G442700 Sobic004G235600--Sobic003G332700 Sobic003G085100 Sobic003G085100 Sobic004G235600--Sobic003G085100 Sobic004G235600--Sobic005G001700 Sobic002G314400 Sobic002G314400 Sobic004G235600--Sobic002G314400 Sobic002G042500 Sobic002G042500 Sobic004G235600--Sobic002G042500 Sobic001G465700 Sobic001G465700 Sobic004G235600--Sobic001G465700 Sobic003G003600--Sobic001G065600 Sobic003G003600--Sobic001G073900 Sobic003G003600--Sobic003G442700 Sobic004G001300 Sobic004G001300 Sobic003G003600--Sobic004G001300 Sobic001G418700 Sobic001G418700 Sobic003G003600--Sobic001G418700 Sobic003G161000 Sobic003G161000 Sobic003G003600--Sobic003G161000 Sobic003G003600--Sobic008G001000 Sobic001G158900 Sobic001G158900 Sobic003G003600--Sobic001G158900 Sobic002G385700 Sobic002G385700 Sobic003G003600--Sobic002G385700 Sobic001G491200 Sobic001G491200 Sobic008G001000--Sobic001G491200 Sobic008G001000--Sobic004G001300 Sobic001G159400 Sobic001G159400 Sobic008G001000--Sobic001G159400 Sobic008G001000--Sobic003G003600 Sobic008G001000--Sobic003G161000 Sobic001G090500 Sobic001G090500 Sobic008G001000--Sobic001G090500 Sobic003G015600 Sobic003G015600 Sobic008G001000--Sobic003G015600 Sobic008G001000--Sobic003G442700 Sobic001G031300 Sobic001G031300 Sobic008G001000--Sobic001G031300 Sobic002G324500 Sobic002G324500 Sobic008G117000--Sobic002G324500 Sobic008G117000--Sobic001G073900 Sobic008G117000--Sobic003G036200 Sobic001G134100 Sobic001G134100 Sobic008G117000--Sobic001G134100 Sobic004G215800 Sobic004G215800 Sobic008G117000--Sobic004G215800 Sobic003G367500 Sobic003G367500 Sobic008G117000--Sobic003G367500 Sobic007G105500 Sobic007G105500 Sobic008G117000--Sobic007G105500 Sobic008G117000--Sobic003G332700 Sobic003G185900 Sobic003G185900 Sobic008G117000--Sobic003G185900 Sobic003G342100--Sobic001G073900 Sobic001G062900 Sobic001G062900 Sobic003G342100--Sobic001G062900 Sobic003G342100--Sobic003G332700 Sobic003G342100--Sobic009G242100 Sobic005G045000 Sobic005G045000 Sobic003G342100--Sobic005G045000 Sobic003G342100--Sobic003G426700 Sobic003G342100--Sobic001G531500 Sobic006G064100 Sobic006G064100 Sobic003G342100--Sobic006G064100 Sobic003G342100--Sobic002G049600 Sobic010G205100--Sobic006G064100 Sobic010G205100--Sobic010G085100 Sobic010G205100--Sobic001G531500 Sobic010G205100--Sobic001G073900 Sobic009G038900 Sobic009G038900 Sobic010G205100--Sobic009G038900 Sobic010G205100--Sobic003G036200 Sobic005G101200 Sobic005G101200 Sobic010G205100--Sobic005G101200 Sobic002G404800 Sobic002G404800 Sobic010G205100--Sobic002G404800 Sobic010G205100--Sobic003G332700
Octagon: transcription factors


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