Gene annotation
Transcriptome id Sobic.003G015600.1
Synonym Sb03g001550
Functional annotation plant-specific domain TIGR01589 family protein, putative, expressed
UniProt A0A1B6Q0T8
Pfam PF09713
Panther DB PTHR31871 PTHR31871:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46420 : Plant protein 1589 of unknown function
RAP-DB (Rice) LOC_Os01g12080.1 : plant-specific domain TIGR01589 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022886 , Zm00025a035939
Brachypodium PNT70175 , PNT70174 , KQK03332 , KQK03333 , KQK03330 , KQK03331
Barley -
Wheat TraesCS3A02G144700 , TraesCS3A02G144700 , TraesCS3A02G144700 , TraesCS3A02G104000 , TraesCS3B02G122400 , TraesCS3D02G106200 , TraesCS3B02G171500 , TraesCS3D02G153500 , TraesCS3D02G153500 , TraesCS3D02G153500
Populus -


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cDNA sequences
Sobic.003G015600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.003G442700 - -
3 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
4 Sobic.008G001000 AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
5 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
6 Sobic.001G072700 expressed protein -
7 Sobic.003G037300 Twin LOV 1, putative, expressed -
8 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
9 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
10 Sobic.002G000700 expressed protein -
11 Sobic.004G298900 OR, putative, expressed -
12 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
13 Sobic.010G049000 expressed protein -
14 Sobic.001G159400 protein kinase domain containing protein, expressed -
15 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
16 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
17 Sobic.004G201700 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
18 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
19 Sobic.010G164200 osFTL12 FT-Like12 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
20 Sobic.002G354501 - -


Gene co-expression network
sample Sobic003G015600 Sobic003G015600 Sobic008G094000 Sobic008G094000 Sobic003G015600--Sobic008G094000 Sobic003G442700 Sobic003G442700 Sobic003G015600--Sobic003G442700 Sobic001G465700 Sobic001G465700 Sobic003G015600--Sobic001G465700 Sobic008G001000 Sobic008G001000 Sobic003G015600--Sobic008G001000 Sobic001G003200 Sobic001G003200 Sobic003G015600--Sobic001G003200 Sobic001G072700 Sobic001G072700 Sobic003G015600--Sobic001G072700 Sobic003G037300 Sobic003G037300 Sobic003G015600--Sobic003G037300 Sobic003G138500 Sobic003G138500 Sobic003G015600--Sobic003G138500 Sobic003G381200 Sobic003G381200 Sobic003G015600--Sobic003G381200 Sobic001G065600 Sobic001G065600 Sobic008G094000--Sobic001G065600 Sobic008G094000--Sobic001G003200 Sobic001G073900 Sobic001G073900 Sobic008G094000--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic008G094000--Sobic003G343500 Sobic010G067100 Sobic010G067100 Sobic008G094000--Sobic010G067100 Sobic010G099700 Sobic010G099700 Sobic008G094000--Sobic010G099700 Sobic006G133900 Sobic006G133900 Sobic008G094000--Sobic006G133900 Sobic008G115900 Sobic008G115900 Sobic008G094000--Sobic008G115900 Sobic008G094000--Sobic003G442700 Sobic003G442700--Sobic001G465700 Sobic004G235600 Sobic004G235600 Sobic003G442700--Sobic004G235600 Sobic008G001900 Sobic008G001900 Sobic003G442700--Sobic008G001900 Sobic003G332700 Sobic003G332700 Sobic003G442700--Sobic003G332700 Sobic009G121000 Sobic009G121000 Sobic003G442700--Sobic009G121000 Sobic002G042500 Sobic002G042500 Sobic003G442700--Sobic002G042500 Sobic001G060401 Sobic001G060401 Sobic003G442700--Sobic001G060401 Sobic004G001300 Sobic004G001300 Sobic003G442700--Sobic004G001300 Sobic003G442700--Sobic001G073900 Sobic006G038500 Sobic006G038500 Sobic001G465700--Sobic006G038500 Sobic010G043800 Sobic010G043800 Sobic001G465700--Sobic010G043800 Sobic005G111550 Sobic005G111550 Sobic001G465700--Sobic005G111550 Sobic001G465700--Sobic003G442700 Sobic001G465700--Sobic008G001900 Sobic004G294700 Sobic004G294700 Sobic001G465700--Sobic004G294700 Sobic001G530900 Sobic001G530900 Sobic001G465700--Sobic001G530900 Sobic004G298900 Sobic004G298900 Sobic001G465700--Sobic004G298900 Sobic006G031800 Sobic006G031800 Sobic001G465700--Sobic006G031800 Sobic001G491200 Sobic001G491200 Sobic008G001000--Sobic001G491200 Sobic008G001000--Sobic004G001300 Sobic001G159400 Sobic001G159400 Sobic008G001000--Sobic001G159400 Sobic003G003600 Sobic003G003600 Sobic008G001000--Sobic003G003600 Sobic003G161000 Sobic003G161000 Sobic008G001000--Sobic003G161000 Sobic001G090500 Sobic001G090500 Sobic008G001000--Sobic001G090500 Sobic008G001000--Sobic003G015600 Sobic008G001000--Sobic003G442700 Sobic001G031300 Sobic001G031300 Sobic008G001000--Sobic001G031300 Sobic009G056700 Sobic009G056700 Sobic001G003200--Sobic009G056700 Sobic007G053800 Sobic007G053800 Sobic001G003200--Sobic007G053800 Sobic004G121400 Sobic004G121400 Sobic001G003200--Sobic004G121400 Sobic007G150100 Sobic007G150100 Sobic001G003200--Sobic007G150100 Sobic006G188000 Sobic006G188000 Sobic001G003200--Sobic006G188000 Sobic003G398800 Sobic003G398800 Sobic001G003200--Sobic003G398800 Sobic001G048400 Sobic001G048400 Sobic001G003200--Sobic001G048400 Sobic003G431700 Sobic003G431700 Sobic001G003200--Sobic003G431700 Sobic001G504400 Sobic001G504400 Sobic001G003200--Sobic001G504400 Sobic007G227700 Sobic007G227700 Sobic001G072700--Sobic007G227700 Sobic004G026500 Sobic004G026500 Sobic001G072700--Sobic004G026500 Sobic010G140600 Sobic010G140600 Sobic001G072700--Sobic010G140600 Sobic008G172300 Sobic008G172300 Sobic001G072700--Sobic008G172300 Sobic001G072700--Sobic003G037300 Sobic009G014100 Sobic009G014100 Sobic001G072700--Sobic009G014100 Sobic006G173600 Sobic006G173600 Sobic001G072700--Sobic006G173600 Sobic003G014300 Sobic003G014300 Sobic001G072700--Sobic003G014300 Sobic001G072700--Sobic004G298900 Sobic003G037300--Sobic004G298900 Sobic009G062400 Sobic009G062400 Sobic003G037300--Sobic009G062400 Sobic008G006100 Sobic008G006100 Sobic003G037300--Sobic008G006100 Sobic010G269400 Sobic010G269400 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic004G154400 Sobic004G154400 Sobic003G037300--Sobic004G154400 Sobic010G076800 Sobic010G076800 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic001G286600 Sobic001G286600 Sobic003G037300--Sobic001G286600 Sobic002G127550 Sobic002G127550 Sobic003G138500--Sobic002G127550 Sobic003G138500--Sobic001G159400 Sobic004G034800 Sobic004G034800 Sobic003G138500--Sobic004G034800 Sobic004G359800 Sobic004G359800 Sobic003G138500--Sobic004G359800 Sobic010G176550 Sobic010G176550 Sobic003G138500--Sobic010G176550 Sobic007G116200 Sobic007G116200 Sobic003G138500--Sobic007G116200 Sobic002G276100 Sobic002G276100 Sobic003G138500--Sobic002G276100 Sobic003G138500--Sobic003G381200 Sobic001G186800 Sobic001G186800 Sobic003G138500--Sobic001G186800 Sobic003G381200--Sobic001G090500 Sobic003G381200--Sobic001G159400 Sobic003G381200--Sobic002G276100 Sobic002G168300 Sobic002G168300 Sobic003G381200--Sobic002G168300 Sobic001G102500 Sobic001G102500 Sobic003G381200--Sobic001G102500 Sobic007G065100 Sobic007G065100 Sobic003G381200--Sobic007G065100 Sobic003G381200--Sobic008G172300 Sobic003G381200--Sobic003G138500 Sobic003G381200--Sobic004G026500
Octagon: transcription factors


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