Gene annotation
Transcriptome id Sobic.005G072500.1
Synonym ATAAP3, Sb05g006010, AAP3
Functional annotation amino acid transporter, putative, expressed
UniProt C5Y6S5
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF290
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09220 : amino acid permease 2
RAP-DB (Rice) LOC_Os11g09020.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a025708 , Zm00025a030927 , Zm00025a054079 , Zm00025a034135 , Zm00025a044966 , Zm00025a009452 , Zm00025a026558 , Zm00025a054084 , Zm00025a054082 , Zm00025a051049 , Zm00025a012741 , Zm00025a037366
Brachypodium PNT71213 , KQJ85086 , PNT71214 , PNT76161 , PNT76162 , KQK20976 , KQK06164 , KQJ83307 , KQK10853 , KQK18868 , KQJ89071 , KQK18866 , KQK18867 , KQK18008 , KQJ91992 , KQJ91991 , KQK10901 , KQK18009 , KQK10902
Barley HORVU5Hr1G037660.9 , HORVU5Hr1G037660.8 , HORVU5Hr1G037660.5 , HORVU5Hr1G037660.4 , HORVU5Hr1G037660.7 , HORVU5Hr1G037660.6 , HORVU5Hr1G037660.1 , HORVU5Hr1G037660.3 , HORVU5Hr1G037660.2 , HORVU7Hr1G088560.8 , HORVU7Hr1G088560.6 , HORVU7Hr1G088560.7 , HORVU7Hr1G088560.4 , HORVU7Hr1G088560.5 , HORVU7Hr1G088560.2 , HORVU7Hr1G088560.3 , HORVU7Hr1G088560.1 , HORVU3Hr1G081570.6 , HORVU3Hr1G081570.7 , HORVU3Hr1G081570.4 , HORVU3Hr1G081570.5 , HORVU3Hr1G081570.2 , HORVU3Hr1G081570.3 , HORVU3Hr1G081570.1 , HORVU3Hr1G081570.8 , HORVU3Hr1G081570.9 , HORVU3Hr1G081570.10 , HORVU7Hr1G038330.8 , HORVU7Hr1G038330.1 , HORVU7Hr1G038330.2 , HORVU7Hr1G038330.3 , HORVU7Hr1G038330.4 , HORVU7Hr1G038330.5 , HORVU7Hr1G038330.6 , HORVU7Hr1G038330.7 , HORVU2Hr1G084710.1 , HORVU2Hr1G084800.1 , HORVU3Hr1G091070.1 , HORVU2Hr1G111140.10 , HORVU3Hr1G091020.1 , HORVU2Hr1G084780.9 , HORVU2Hr1G084780.8 , HORVU2Hr1G084780.7 , HORVU2Hr1G084780.6 , HORVU2Hr1G084780.5 , HORVU2Hr1G084780.4 , HORVU2Hr1G084780.3 , HORVU2Hr1G084780.2 , HORVU2Hr1G084780.1 , HORVU2Hr1G111140.8 , HORVU2Hr1G111140.9 , HORVU2Hr1G111140.1 , HORVU2Hr1G111140.2 , HORVU2Hr1G111140.3 , HORVU2Hr1G111140.4 , HORVU2Hr1G111140.5 , HORVU2Hr1G111140.6 , HORVU2Hr1G111140.7 , HORVU3Hr1G091120.1 , HORVU3Hr1G091120.2 , HORVU3Hr1G091120.3 , HORVU3Hr1G091120.4 , HORVU3Hr1G091120.5 , HORVU3Hr1G091120.6 , HORVU3Hr1G091120.7 , HORVU4Hr1G043680.1 , HORVU4Hr1G043680.3 , HORVU4Hr1G043680.2 , HORVU4Hr1G043680.5 , HORVU4Hr1G043680.4 , HORVU7Hr1G088510.3 , HORVU7Hr1G088510.2 , HORVU7Hr1G088510.1 , HORVU7Hr1G088510.6 , HORVU7Hr1G088510.5 , HORVU7Hr1G088510.4 , HORVU7Hr1G088510.9 , HORVU7Hr1G088510.8 , HORVU3Hr1G091020.3 , HORVU3Hr1G091020.2 , HORVU3Hr1G091020.4 , HORVU7Hr1G039670.2 , HORVU7Hr1G039670.1
Wheat TraesCS2D02G500000 , TraesCS4B02G100800 , TraesCS3B02G420700 , TraesCS1A02G264500 , TraesCS4D02G097400 , TraesCS3D02G402200 , TraesCS7A02G188200 , TraesCS7D02G388300 , TraesCS3B02G441100 , TraesCS5B02G116100 , TraesCS7A02G356600 , TraesCS4A02G215300 , TraesCS3D02G381500 , TraesCS2D02G256000 , TraesCS7D02G196100 , TraesCS3D02G402300 , TraesCS2B02G527800 , TraesCS2A02G268200 , TraesCS1D02G264700 , TraesCS2B02G266600 , TraesCS3B02G441200 , TraesCS3B02G441300 , TraesCS5A02G115100 , TraesCS3A02G406800 , TraesCS5D02G125700 , TraesCS3A02G406900 , TraesCS1B02G275200 , TraesCS7D02G366200 , TraesCS7A02G194500 , TraesCS2B02G367000 , TraesCS7B02G100100 , TraesCS2D02G347000 , TraesCS3A02G388000 , TraesCS2D02G346500 , TraesCS7D02G189000 , TraesCS7B02G093200 , TraesCS3A02G407000 , TraesCS2A02G348600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G046800 transketolase, putative, expressed K00167: BCKDHB, 2-oxoisovalerate dehydrogenase E1 component beta subunit
2 Sobic.006G159900 DTA2, putative, expressed -
3 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
4 Sobic.001G543800 ethylene-responsive element-binding protein, putative, expressed -
5 Sobic.001G294100 ICE-like protease p20 domain containing protein, expressed -
6 Sobic.006G028300 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
7 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
8 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
9 Sobic.003G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
10 Sobic.002G140700 triacylglycerol lipase 1 precursor, putative, expressed -
11 Sobic.005G177800 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.002G009401 - -
13 Sobic.001G535800 DNA methyltransferase protein, putative, expressed -
14 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
15 Sobic.009G178800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
16 Sobic.010G190600 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
17 Sobic.003G115700 lipase, putative, expressed -
18 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
19 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
20 Sobic.005G121800 expressed protein -


Gene co-expression network
sample Sobic005G072500 Sobic005G072500 Sobic002G046800 Sobic002G046800 Sobic005G072500--Sobic002G046800 Sobic006G159900 Sobic006G159900 Sobic005G072500--Sobic006G159900 Sobic010G001600 Sobic010G001600 Sobic005G072500--Sobic010G001600 Sobic001G543800 Sobic001G543800 Sobic005G072500--Sobic001G543800 Sobic001G294100 Sobic001G294100 Sobic005G072500--Sobic001G294100 Sobic006G028300 Sobic006G028300 Sobic005G072500--Sobic006G028300 Sobic001G194900 Sobic001G194900 Sobic005G072500--Sobic001G194900 Sobic003G324000 Sobic003G324000 Sobic005G072500--Sobic003G324000 Sobic003G074500 Sobic003G074500 Sobic005G072500--Sobic003G074500 Sobic004G153501 Sobic004G153501 Sobic002G046800--Sobic004G153501 Sobic003G069500 Sobic003G069500 Sobic002G046800--Sobic003G069500 Sobic006G138400 Sobic006G138400 Sobic002G046800--Sobic006G138400 Sobic004G153400 Sobic004G153400 Sobic002G046800--Sobic004G153400 Sobic001G535800 Sobic001G535800 Sobic002G046800--Sobic001G535800 Sobic006G214500 Sobic006G214500 Sobic002G046800--Sobic006G214500 Sobic002G046800--Sobic001G543800 Sobic004G052900 Sobic004G052900 Sobic002G046800--Sobic004G052900 Sobic009G249200 Sobic009G249200 Sobic002G046800--Sobic009G249200 Sobic006G128900 Sobic006G128900 Sobic006G159900--Sobic006G128900 Sobic001G477800 Sobic001G477800 Sobic006G159900--Sobic001G477800 Sobic001G511500 Sobic001G511500 Sobic006G159900--Sobic001G511500 Sobic004G031700 Sobic004G031700 Sobic006G159900--Sobic004G031700 Sobic005G177800 Sobic005G177800 Sobic006G159900--Sobic005G177800 Sobic007G000100 Sobic007G000100 Sobic006G159900--Sobic007G000100 Sobic006G159900--Sobic001G543800 Sobic008G054500 Sobic008G054500 Sobic006G159900--Sobic008G054500 Sobic008G078100 Sobic008G078100 Sobic006G159900--Sobic008G078100 Sobic008G160700 Sobic008G160700 Sobic010G001600--Sobic008G160700 Sobic006G124900 Sobic006G124900 Sobic010G001600--Sobic006G124900 Sobic010G001600--Sobic001G194900 Sobic010G001600--Sobic005G177800 Sobic010G001600--Sobic001G543800 Sobic005G130200 Sobic005G130200 Sobic010G001600--Sobic005G130200 Sobic002G300400 Sobic002G300400 Sobic010G001600--Sobic002G300400 Sobic010G276800 Sobic010G276800 Sobic010G001600--Sobic010G276800 Sobic008G024600 Sobic008G024600 Sobic010G001600--Sobic008G024600 Sobic001G543800--Sobic010G001600 Sobic001G543800--Sobic005G177800 Sobic001G543800--Sobic006G128900 Sobic001G543800--Sobic006G124900 Sobic001G543800--Sobic001G194900 Sobic004G196700 Sobic004G196700 Sobic001G543800--Sobic004G196700 Sobic001G543800--Sobic008G024600 Sobic009G040700 Sobic009G040700 Sobic001G543800--Sobic009G040700 Sobic004G256600 Sobic004G256600 Sobic001G543800--Sobic004G256600 Sobic003G185200 Sobic003G185200 Sobic001G294100--Sobic003G185200 Sobic009G042400 Sobic009G042400 Sobic001G294100--Sobic009G042400 Sobic010G000700 Sobic010G000700 Sobic001G294100--Sobic010G000700 Sobic010G202600 Sobic010G202600 Sobic001G294100--Sobic010G202600 Sobic004G246700 Sobic004G246700 Sobic001G294100--Sobic004G246700 Sobic002G197100 Sobic002G197100 Sobic001G294100--Sobic002G197100 Sobic001G425000 Sobic001G425000 Sobic001G294100--Sobic001G425000 Sobic003G442000 Sobic003G442000 Sobic001G294100--Sobic003G442000 Sobic005G025300 Sobic005G025300 Sobic001G294100--Sobic005G025300 Sobic007G115200 Sobic007G115200 Sobic006G028300--Sobic007G115200 Sobic004G021200 Sobic004G021200 Sobic006G028300--Sobic004G021200 Sobic009G232700 Sobic009G232700 Sobic006G028300--Sobic009G232700 Sobic006G273200 Sobic006G273200 Sobic006G028300--Sobic006G273200 Sobic010G280100 Sobic010G280100 Sobic006G028300--Sobic010G280100 Sobic002G092300 Sobic002G092300 Sobic006G028300--Sobic002G092300 Sobic002G399100 Sobic002G399100 Sobic006G028300--Sobic002G399100 Sobic010G268300 Sobic010G268300 Sobic006G028300--Sobic010G268300 Sobic008G103200 Sobic008G103200 Sobic006G028300--Sobic008G103200 Sobic001G194900--Sobic008G160700 Sobic001G194900--Sobic010G001600 Sobic007G130600 Sobic007G130600 Sobic001G194900--Sobic007G130600 Sobic005G187200 Sobic005G187200 Sobic001G194900--Sobic005G187200 Sobic001G194900--Sobic001G543800 Sobic009G235900 Sobic009G235900 Sobic001G194900--Sobic009G235900 Sobic001G424700 Sobic001G424700 Sobic001G194900--Sobic001G424700 Sobic001G194900--Sobic005G177800 Sobic001G194900--Sobic005G130200 Sobic009G198900 Sobic009G198900 Sobic003G324000--Sobic009G198900 Sobic001G368400 Sobic001G368400 Sobic003G324000--Sobic001G368400 Sobic003G324000--Sobic005G187200 Sobic010G056200 Sobic010G056200 Sobic003G324000--Sobic010G056200 Sobic001G479500 Sobic001G479500 Sobic003G324000--Sobic001G479500 Sobic003G324000--Sobic010G280100 Sobic007G205800 Sobic007G205800 Sobic003G324000--Sobic007G205800 Sobic009G087800 Sobic009G087800 Sobic003G324000--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G324000--Sobic003G258400 Sobic002G425300 Sobic002G425300 Sobic003G074500--Sobic002G425300 Sobic001G511000 Sobic001G511000 Sobic003G074500--Sobic001G511000 Sobic001G377000 Sobic001G377000 Sobic003G074500--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic003G074500--Sobic004G096300 Sobic007G148200 Sobic007G148200 Sobic003G074500--Sobic007G148200 Sobic007G071000 Sobic007G071000 Sobic003G074500--Sobic007G071000 Sobic003G126100 Sobic003G126100 Sobic003G074500--Sobic003G126100 Sobic003G074500--Sobic005G072500 Sobic002G226000 Sobic002G226000 Sobic003G074500--Sobic002G226000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.