Gene annotation
Transcriptome id Sobic.001G535800.3,Sobic.001G535800.4
Synonym DMT7, DRM2, Sb01g049860
Functional annotation DNA methyltransferase protein, putative, expressed
UniProt A0A1Z5SBU1 , A0A1Z5SBV4
Pfam PF00145
Panther DB PTHR23068 PTHR23068:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14620 : domains rearranged methyltransferase 2
RAP-DB (Rice) LOC_Os03g02010.4 : DNA methyltransferase protein, putative, expressed
MaizeGDB (Corn) Zm00025a000188 , Zm00025a053540
Brachypodium KQK24054
Barley -
Wheat TraesCS3B02G504000
Populus -


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cDNA sequences
Sobic.001G535800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G172400 AAA-type ATPase family protein, putative, expressed K13338: peroxin-1
2 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
3 Sobic.001G498600 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
4 Sobic.009G083900 C-5 cytosine-specific DNA methylase, putative, expressed K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
5 Sobic.004G216500 hypothetical protein -
6 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
7 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
8 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
9 Sobic.010G153700 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
10 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
11 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
12 Sobic.004G205600 bromodomain domain containing protein, expressed -
13 Sobic.009G005500 expressed protein -
14 Sobic.001G413500 expressed protein -
15 Sobic.002G046800 transketolase, putative, expressed K00167: BCKDHB, 2-oxoisovalerate dehydrogenase E1 component beta subunit
16 Sobic.001G292200 dynamin family protein, putative, expressed -
17 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
18 Sobic.007G096000 expressed protein -
19 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
20 Sobic.002G419800 structural constituent of ribosome, putative, expressed -


Gene co-expression network
sample Sobic001G535800 Sobic001G535800 Sobic007G172400 Sobic007G172400 Sobic001G535800--Sobic007G172400 Sobic003G408500 Sobic003G408500 Sobic001G535800--Sobic003G408500 Sobic001G498600 Sobic001G498600 Sobic001G535800--Sobic001G498600 Sobic009G083900 Sobic009G083900 Sobic001G535800--Sobic009G083900 Sobic004G216500 Sobic004G216500 Sobic001G535800--Sobic004G216500 Sobic003G100800 Sobic003G100800 Sobic001G535800--Sobic003G100800 Sobic006G245400 Sobic006G245400 Sobic001G535800--Sobic006G245400 Sobic001G088100 Sobic001G088100 Sobic001G535800--Sobic001G088100 Sobic010G153700 Sobic010G153700 Sobic001G535800--Sobic010G153700 Sobic001G058700 Sobic001G058700 Sobic007G172400--Sobic001G058700 Sobic002G071500 Sobic002G071500 Sobic007G172400--Sobic002G071500 Sobic001G050600 Sobic001G050600 Sobic007G172400--Sobic001G050600 Sobic004G347400 Sobic004G347400 Sobic007G172400--Sobic004G347400 Sobic002G419800 Sobic002G419800 Sobic007G172400--Sobic002G419800 Sobic001G219900 Sobic001G219900 Sobic007G172400--Sobic001G219900 Sobic004G113400 Sobic004G113400 Sobic007G172400--Sobic004G113400 Sobic001G474600 Sobic001G474600 Sobic007G172400--Sobic001G474600 Sobic003G408600 Sobic003G408600 Sobic007G172400--Sobic003G408600 Sobic009G166300 Sobic009G166300 Sobic003G408500--Sobic009G166300 Sobic005G045300 Sobic005G045300 Sobic003G408500--Sobic005G045300 Sobic001G512700 Sobic001G512700 Sobic003G408500--Sobic001G512700 Sobic004G205600 Sobic004G205600 Sobic003G408500--Sobic004G205600 Sobic007G217000 Sobic007G217000 Sobic003G408500--Sobic007G217000 Sobic003G397800 Sobic003G397800 Sobic003G408500--Sobic003G397800 Sobic004G021100 Sobic004G021100 Sobic003G408500--Sobic004G021100 Sobic001G109800 Sobic001G109800 Sobic003G408500--Sobic001G109800 Sobic004G067700 Sobic004G067700 Sobic003G408500--Sobic004G067700 Sobic010G112000 Sobic010G112000 Sobic001G498600--Sobic010G112000 Sobic006G131500 Sobic006G131500 Sobic001G498600--Sobic006G131500 Sobic001G146800 Sobic001G146800 Sobic001G498600--Sobic001G146800 Sobic005G008800 Sobic005G008800 Sobic001G498600--Sobic005G008800 Sobic002G134200 Sobic002G134200 Sobic001G498600--Sobic002G134200 Sobic001G498600--Sobic001G058700 Sobic004G317100 Sobic004G317100 Sobic001G498600--Sobic004G317100 Sobic007G193700 Sobic007G193700 Sobic001G498600--Sobic007G193700 Sobic001G498600--Sobic007G172400 Sobic001G413500 Sobic001G413500 Sobic009G083900--Sobic001G413500 Sobic004G240800 Sobic004G240800 Sobic009G083900--Sobic004G240800 Sobic001G497300 Sobic001G497300 Sobic009G083900--Sobic001G497300 Sobic007G185900 Sobic007G185900 Sobic009G083900--Sobic007G185900 Sobic009G000500 Sobic009G000500 Sobic009G083900--Sobic009G000500 Sobic004G196700 Sobic004G196700 Sobic009G083900--Sobic004G196700 Sobic004G145500 Sobic004G145500 Sobic009G083900--Sobic004G145500 Sobic008G054500 Sobic008G054500 Sobic009G083900--Sobic008G054500 Sobic009G083900--Sobic005G045300 Sobic004G216500--Sobic008G054500 Sobic007G126600 Sobic007G126600 Sobic004G216500--Sobic007G126600 Sobic001G511500 Sobic001G511500 Sobic004G216500--Sobic001G511500 Sobic003G119000 Sobic003G119000 Sobic004G216500--Sobic003G119000 Sobic009G138800 Sobic009G138800 Sobic004G216500--Sobic009G138800 Sobic003G108700 Sobic003G108700 Sobic004G216500--Sobic003G108700 Sobic008G192600 Sobic008G192600 Sobic004G216500--Sobic008G192600 Sobic007G167500 Sobic007G167500 Sobic004G216500--Sobic007G167500 Sobic001G107900 Sobic001G107900 Sobic004G216500--Sobic001G107900 Sobic004G052900 Sobic004G052900 Sobic003G100800--Sobic004G052900 Sobic003G100800--Sobic007G172400 Sobic003G109100 Sobic003G109100 Sobic003G100800--Sobic003G109100 Sobic007G024700 Sobic007G024700 Sobic003G100800--Sobic007G024700 Sobic004G329400 Sobic004G329400 Sobic003G100800--Sobic004G329400 Sobic001G248300 Sobic001G248300 Sobic003G100800--Sobic001G248300 Sobic001G178700 Sobic001G178700 Sobic003G100800--Sobic001G178700 Sobic010G251200 Sobic010G251200 Sobic003G100800--Sobic010G251200 Sobic003G100800--Sobic004G113400 Sobic002G340100 Sobic002G340100 Sobic006G245400--Sobic002G340100 Sobic006G245400--Sobic007G172400 Sobic006G245400--Sobic004G052900 Sobic006G245400--Sobic004G113400 Sobic001G114000 Sobic001G114000 Sobic006G245400--Sobic001G114000 Sobic006G237400 Sobic006G237400 Sobic006G245400--Sobic006G237400 Sobic006G245400--Sobic007G217000 Sobic001G065000 Sobic001G065000 Sobic006G245400--Sobic001G065000 Sobic006G245400--Sobic001G474600 Sobic009G005500 Sobic009G005500 Sobic001G088100--Sobic009G005500 Sobic007G119200 Sobic007G119200 Sobic001G088100--Sobic007G119200 Sobic010G069100 Sobic010G069100 Sobic001G088100--Sobic010G069100 Sobic010G236400 Sobic010G236400 Sobic001G088100--Sobic010G236400 Sobic003G394300 Sobic003G394300 Sobic001G088100--Sobic003G394300 Sobic007G105100 Sobic007G105100 Sobic001G088100--Sobic007G105100 Sobic001G241200 Sobic001G241200 Sobic001G088100--Sobic001G241200 Sobic004G274200 Sobic004G274200 Sobic001G088100--Sobic004G274200 Sobic001G088100--Sobic003G408600 Sobic002G315200 Sobic002G315200 Sobic010G153700--Sobic002G315200 Sobic009G026500 Sobic009G026500 Sobic010G153700--Sobic009G026500 Sobic009G191000 Sobic009G191000 Sobic010G153700--Sobic009G191000 Sobic010G153700--Sobic001G512700 Sobic002G008900 Sobic002G008900 Sobic010G153700--Sobic002G008900 Sobic010G153700--Sobic002G134200 Sobic002G006900 Sobic002G006900 Sobic010G153700--Sobic002G006900 Sobic001G071400 Sobic001G071400 Sobic010G153700--Sobic001G071400 Sobic001G214300 Sobic001G214300 Sobic010G153700--Sobic001G214300
Octagon: transcription factors


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