Gene annotation
Transcriptome id Sobic.010G190600.4,Sobic.010G190600.3
Synonym Sb10g024060
Functional annotation zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed
UniProt A0A194YK74
Pfam PF01428 PF01754
Panther DB PTHR10634 PTHR10634:SF30
NCBI CDD KOG3173; Predicted Zn-finger protein
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G51200 : A20/AN1-like zinc finger family protein
RAP-DB (Rice) LOC_Os06g41010.3,LOC_Os06g41010.1 : zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a019645 , Zm00025a051568 , Zm00025a034662
Brachypodium KQK17679
Barley -
Wheat TraesCS6D02G154100
Populus PNT29928 , PNT29929 , PNT29926 , PNT29927 , PNT29933 , PNT29932 , PNT29931 , PNT29930


JBrowse

Open New Page


cDNA sequences
Sobic.010G190600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G077200 expressed protein -
2 Sobic.002G313300 bromodomain domain containing protein, expressed -
3 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
4 Sobic.009G231300 drought induced 19 protein, putative, expressed -
5 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
6 Sobic.009G135800 CUE domain containing protein, expressed -
7 Sobic.009G178600 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
8 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
9 Sobic.003G258400 splicing factor-related, putative, expressed -
10 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
11 Sobic.004G031700 expressed protein -
12 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
13 Sobic.002G151600 R-interacting factor 1, putative, expressed -
14 Sobic.003G442000 IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
15 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
16 Sobic.003G307000 RNA recognition motif containing protein, expressed K18667: activating signal cointegrator complex subunit 2
17 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
18 Sobic.002G324200 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
19 Sobic.003G202800 holocarboxylase synthetase, putative, expressed -
20 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -


Gene co-expression network
sample Sobic010G190600 Sobic010G190600 Sobic002G077200 Sobic002G077200 Sobic010G190600--Sobic002G077200 Sobic002G313300 Sobic002G313300 Sobic010G190600--Sobic002G313300 Sobic004G256600 Sobic004G256600 Sobic010G190600--Sobic004G256600 Sobic009G231300 Sobic009G231300 Sobic010G190600--Sobic009G231300 Sobic009G000500 Sobic009G000500 Sobic010G190600--Sobic009G000500 Sobic009G135800 Sobic009G135800 Sobic010G190600--Sobic009G135800 Sobic009G178600 Sobic009G178600 Sobic010G190600--Sobic009G178600 Sobic006G128900 Sobic006G128900 Sobic010G190600--Sobic006G128900 Sobic003G258400 Sobic003G258400 Sobic010G190600--Sobic003G258400 Sobic002G077200--Sobic002G313300 Sobic010G263800 Sobic010G263800 Sobic002G077200--Sobic010G263800 Sobic002G077200--Sobic003G258400 Sobic007G205800 Sobic007G205800 Sobic002G077200--Sobic007G205800 Sobic006G009400 Sobic006G009400 Sobic002G077200--Sobic006G009400 Sobic002G077200--Sobic009G231300 Sobic001G477800 Sobic001G477800 Sobic002G077200--Sobic001G477800 Sobic005G187200 Sobic005G187200 Sobic002G077200--Sobic005G187200 Sobic001G543900 Sobic001G543900 Sobic002G077200--Sobic001G543900 Sobic002G313300--Sobic001G477800 Sobic002G313300--Sobic002G077200 Sobic007G011400 Sobic007G011400 Sobic002G313300--Sobic007G011400 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic006G080300 Sobic006G080300 Sobic002G313300--Sobic006G080300 Sobic002G313300--Sobic006G009400 Sobic007G185900 Sobic007G185900 Sobic002G313300--Sobic007G185900 Sobic004G031700 Sobic004G031700 Sobic002G313300--Sobic004G031700 Sobic004G256600--Sobic003G258400 Sobic004G271900 Sobic004G271900 Sobic004G256600--Sobic004G271900 Sobic004G256600--Sobic010G263800 Sobic009G040700 Sobic009G040700 Sobic004G256600--Sobic009G040700 Sobic004G256600--Sobic005G187200 Sobic004G256600--Sobic006G009400 Sobic004G256600--Sobic009G231300 Sobic009G117400 Sobic009G117400 Sobic004G256600--Sobic009G117400 Sobic004G256600--Sobic002G077200 Sobic005G130100 Sobic005G130100 Sobic009G231300--Sobic005G130100 Sobic009G180200 Sobic009G180200 Sobic009G231300--Sobic009G180200 Sobic009G109450 Sobic009G109450 Sobic009G231300--Sobic009G109450 Sobic009G078500 Sobic009G078500 Sobic009G231300--Sobic009G078500 Sobic007G156500 Sobic007G156500 Sobic009G231300--Sobic007G156500 Sobic005G003200 Sobic005G003200 Sobic009G231300--Sobic005G003200 Sobic009G231300--Sobic003G258400 Sobic004G199600 Sobic004G199600 Sobic009G231300--Sobic004G199600 Sobic010G050600 Sobic010G050600 Sobic009G231300--Sobic010G050600 Sobic009G000500--Sobic004G031700 Sobic003G445400 Sobic003G445400 Sobic009G000500--Sobic003G445400 Sobic002G320500 Sobic002G320500 Sobic009G000500--Sobic002G320500 Sobic009G000500--Sobic006G128900 Sobic006G133800 Sobic006G133800 Sobic009G000500--Sobic006G133800 Sobic001G090400 Sobic001G090400 Sobic009G000500--Sobic001G090400 Sobic003G307000 Sobic003G307000 Sobic009G000500--Sobic003G307000 Sobic008G173900 Sobic008G173900 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100 Sobic009G135800--Sobic004G031700 Sobic002G340100 Sobic002G340100 Sobic009G135800--Sobic002G340100 Sobic008G024600 Sobic008G024600 Sobic009G135800--Sobic008G024600 Sobic009G135800--Sobic006G128900 Sobic002G053000 Sobic002G053000 Sobic009G135800--Sobic002G053000 Sobic009G135800--Sobic003G445400 Sobic002G158700 Sobic002G158700 Sobic009G135800--Sobic002G158700 Sobic006G173100 Sobic006G173100 Sobic009G135800--Sobic006G173100 Sobic009G135800--Sobic009G000500 Sobic004G006300 Sobic004G006300 Sobic009G178600--Sobic004G006300 Sobic001G083600 Sobic001G083600 Sobic009G178600--Sobic001G083600 Sobic008G128600 Sobic008G128600 Sobic009G178600--Sobic008G128600 Sobic003G202800 Sobic003G202800 Sobic009G178600--Sobic003G202800 Sobic009G178600--Sobic010G190600 Sobic002G010300 Sobic002G010300 Sobic009G178600--Sobic002G010300 Sobic004G283000 Sobic004G283000 Sobic009G178600--Sobic004G283000 Sobic004G034400 Sobic004G034400 Sobic009G178600--Sobic004G034400 Sobic006G209500 Sobic006G209500 Sobic009G178600--Sobic006G209500 Sobic006G209850 Sobic006G209850 Sobic006G128900--Sobic006G209850 Sobic001G511500 Sobic001G511500 Sobic006G128900--Sobic001G511500 Sobic006G128900--Sobic004G031700 Sobic006G128900--Sobic009G000500 Sobic006G128900--Sobic001G090400 Sobic006G128900--Sobic003G445400 Sobic003G268300 Sobic003G268300 Sobic006G128900--Sobic003G268300 Sobic006G128900--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic006G128900--Sobic002G157000 Sobic003G258400--Sobic002G077200 Sobic003G258400--Sobic004G256600 Sobic009G087800 Sobic009G087800 Sobic003G258400--Sobic009G087800 Sobic003G258400--Sobic009G231300 Sobic003G258400--Sobic009G180200 Sobic003G258400--Sobic004G271900 Sobic003G258400--Sobic007G205800 Sobic003G093600 Sobic003G093600 Sobic003G258400--Sobic003G093600 Sobic009G110366 Sobic009G110366 Sobic003G258400--Sobic009G110366
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.