Gene annotation
Transcriptome id Sobic.002G227200.3,Sobic.002G227200.4,Sobic.002G227200.5,Sobic.002G227200.6,Sobic.002G227200.1
Synonym Sb02g026750
Functional annotation AGAP010609-PA, putative, expressed
UniProt A0A1B6QCX8 , A0A1W0W5G3
Pfam PF05207 PF00226 PF05207
Panther DB PTHR21454 PTHR21454:SF4
NCBI CDD KOG2923; Uncharacterized conserved protein
KEGG Orthology K17867; DPH4, diphthamide biosynthesis protein 4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10130 : DNAJ heat shock N-terminal domain-containing protein
RAP-DB (Rice) LOC_Os09g28590.1,LOC_Os09g28590.2 : AGAP010609-PA, putative, expressed
MaizeGDB (Corn) Zm00025a014080
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G227200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2
2 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
3 Sobic.005G025300 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
4 Sobic.009G223600 OsFBX53 - F-box domain containing protein, expressed -
5 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
6 Sobic.007G203200 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
7 Sobic.003G368800 expressed protein -
8 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
9 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
10 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
11 Sobic.001G191100 OsFBX157 - F-box domain containing protein, expressed -
12 Sobic.002G298100 expressed protein -
13 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
14 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
15 Sobic.001G276200 ACI13, putative, expressed -
16 Sobic.006G134800 autophagy-related protein 10, putative, expressed K17888: ATG10L, ubiquitin-like-conjugating enzyme ATG10
17 Sobic.010G232900 surp module family protein, putative, expressed -
18 Sobic.005G106500 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K11165: dehydrogenase/reductase SDR family member 7
19 Sobic.007G216700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
20 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2


Gene co-expression network
sample Sobic002G227200 Sobic002G227200 Sobic010G239800 Sobic010G239800 Sobic002G227200--Sobic010G239800 Sobic002G347000 Sobic002G347000 Sobic002G227200--Sobic002G347000 Sobic005G025300 Sobic005G025300 Sobic002G227200--Sobic005G025300 Sobic009G223600 Sobic009G223600 Sobic002G227200--Sobic009G223600 Sobic002G122600 Sobic002G122600 Sobic002G227200--Sobic002G122600 Sobic007G203200 Sobic007G203200 Sobic002G227200--Sobic007G203200 Sobic003G368800 Sobic003G368800 Sobic002G227200--Sobic003G368800 Sobic003G401100 Sobic003G401100 Sobic002G227200--Sobic003G401100 Sobic009G033900 Sobic009G033900 Sobic002G227200--Sobic009G033900 Sobic003G099300 Sobic003G099300 Sobic010G239800--Sobic003G099300 Sobic007G027700 Sobic007G027700 Sobic010G239800--Sobic007G027700 Sobic010G085200 Sobic010G085200 Sobic010G239800--Sobic010G085200 Sobic010G269100 Sobic010G269100 Sobic010G239800--Sobic010G269100 Sobic006G233300 Sobic006G233300 Sobic010G239800--Sobic006G233300 Sobic010G232900 Sobic010G232900 Sobic010G239800--Sobic010G232900 Sobic010G279700 Sobic010G279700 Sobic010G239800--Sobic010G279700 Sobic008G092300 Sobic008G092300 Sobic010G239800--Sobic008G092300 Sobic002G145800 Sobic002G145800 Sobic010G239800--Sobic002G145800 Sobic003G143200 Sobic003G143200 Sobic002G347000--Sobic003G143200 Sobic005G160400 Sobic005G160400 Sobic002G347000--Sobic005G160400 Sobic001G309400 Sobic001G309400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic007G115200 Sobic007G115200 Sobic002G347000--Sobic007G115200 Sobic006G199200 Sobic006G199200 Sobic002G347000--Sobic006G199200 Sobic007G167900 Sobic007G167900 Sobic002G347000--Sobic007G167900 Sobic001G281600 Sobic001G281600 Sobic002G347000--Sobic001G281600 Sobic008G076800 Sobic008G076800 Sobic002G347000--Sobic008G076800 Sobic001G043400 Sobic001G043400 Sobic005G025300--Sobic001G043400 Sobic001G294100 Sobic001G294100 Sobic005G025300--Sobic001G294100 Sobic010G278600 Sobic010G278600 Sobic005G025300--Sobic010G278600 Sobic001G373400 Sobic001G373400 Sobic005G025300--Sobic001G373400 Sobic010G055800 Sobic010G055800 Sobic005G025300--Sobic010G055800 Sobic005G025300--Sobic002G227200 Sobic005G025300--Sobic003G368800 Sobic004G236800 Sobic004G236800 Sobic005G025300--Sobic004G236800 Sobic006G078600 Sobic006G078600 Sobic005G025300--Sobic006G078600 Sobic003G133900 Sobic003G133900 Sobic009G223600--Sobic003G133900 Sobic001G124200 Sobic001G124200 Sobic009G223600--Sobic001G124200 Sobic004G325400 Sobic004G325400 Sobic009G223600--Sobic004G325400 Sobic001G094900 Sobic001G094900 Sobic009G223600--Sobic001G094900 Sobic007G009400 Sobic007G009400 Sobic009G223600--Sobic007G009400 Sobic009G223600--Sobic010G279700 Sobic001G143500 Sobic001G143500 Sobic009G223600--Sobic001G143500 Sobic001G008200 Sobic001G008200 Sobic009G223600--Sobic001G008200 Sobic001G493200 Sobic001G493200 Sobic009G223600--Sobic001G493200 Sobic002G122600--Sobic001G281600 Sobic009G215800 Sobic009G215800 Sobic002G122600--Sobic009G215800 Sobic010G268300 Sobic010G268300 Sobic002G122600--Sobic010G268300 Sobic002G309800 Sobic002G309800 Sobic002G122600--Sobic002G309800 Sobic004G083700 Sobic004G083700 Sobic002G122600--Sobic004G083700 Sobic001G429300 Sobic001G429300 Sobic002G122600--Sobic001G429300 Sobic003G078800 Sobic003G078800 Sobic002G122600--Sobic003G078800 Sobic003G196900 Sobic003G196900 Sobic002G122600--Sobic003G196900 Sobic009G017400 Sobic009G017400 Sobic002G122600--Sobic009G017400 Sobic010G145800 Sobic010G145800 Sobic007G203200--Sobic010G145800 Sobic009G050900 Sobic009G050900 Sobic007G203200--Sobic009G050900 Sobic001G407200 Sobic001G407200 Sobic007G203200--Sobic001G407200 Sobic007G203200--Sobic001G281600 Sobic010G140400 Sobic010G140400 Sobic007G203200--Sobic010G140400 Sobic007G203200--Sobic010G279700 Sobic005G106500 Sobic005G106500 Sobic007G203200--Sobic005G106500 Sobic007G203200--Sobic003G401100 Sobic006G118700 Sobic006G118700 Sobic007G203200--Sobic006G118700 Sobic001G144600 Sobic001G144600 Sobic003G368800--Sobic001G144600 Sobic002G174900 Sobic002G174900 Sobic003G368800--Sobic002G174900 Sobic003G368800--Sobic005G025300 Sobic002G040800 Sobic002G040800 Sobic003G368800--Sobic002G040800 Sobic004G147200 Sobic004G147200 Sobic003G368800--Sobic004G147200 Sobic003G368800--Sobic002G227200 Sobic004G227300 Sobic004G227300 Sobic003G368800--Sobic004G227300 Sobic001G276200 Sobic001G276200 Sobic003G368800--Sobic001G276200 Sobic003G368800--Sobic001G429300 Sobic010G236400 Sobic010G236400 Sobic003G401100--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic003G401100--Sobic004G084300 Sobic003G401100--Sobic001G281600 Sobic003G081000 Sobic003G081000 Sobic003G401100--Sobic003G081000 Sobic003G401100--Sobic007G027700 Sobic003G401100--Sobic001G143500 Sobic007G000800 Sobic007G000800 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G241200 Sobic003G241200 Sobic003G401100--Sobic003G241200 Sobic006G183000 Sobic006G183000 Sobic009G033900--Sobic006G183000 Sobic002G268400 Sobic002G268400 Sobic009G033900--Sobic002G268400 Sobic001G249700 Sobic001G249700 Sobic009G033900--Sobic001G249700 Sobic004G074300 Sobic004G074300 Sobic009G033900--Sobic004G074300 Sobic001G263000 Sobic001G263000 Sobic009G033900--Sobic001G263000 Sobic001G152000 Sobic001G152000 Sobic009G033900--Sobic001G152000 Sobic004G057800 Sobic004G057800 Sobic009G033900--Sobic004G057800 Sobic009G033900--Sobic010G269100 Sobic006G252100 Sobic006G252100 Sobic009G033900--Sobic006G252100
Octagon: transcription factors


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