Gene annotation
Transcriptome id Sobic.001G527700.1,Sobic.001G527700.2
Synonym Sb01g049100
Functional annotation CAMK_CAMK_like_ULKh_APGy.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1Z5SBQ2 , A0A1Z5SBS0
Pfam PF00069
Panther DB PTHR24348 PTHR24348:SF25
NCBI CDD KOG0598; Ribosomal protein S6 kinase and related proteins KOG0032Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K08269; ULK2, serine/threonine-protein kinase ULK2
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37840 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g02980.2 : CAMK_CAMK_like_ULKh_APGy.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a000297
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G527700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G067800 - -
2 Sobic.010G235800 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
4 Sobic.010G194700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
5 Sobic.005G025300 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
6 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
7 Sobic.001G405300 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed -
8 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
9 Sobic.005G072400 expressed protein -
10 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
11 Sobic.002G159200 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
12 Sobic.009G137900 OsFBL9 - F-box domain and LRR containing protein, expressed -
13 Sobic.006G067200 - -
14 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
15 Sobic.005G059100 bromodomain domain containing protein, expressed -
16 Sobic.001G426900 coronatine-insensitive protein, putative, expressed K13463: coronatine-insensitive protein 1
17 Sobic.007G227000 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
18 Sobic.007G041300 expressed protein -
19 Sobic.007G026000 ATBET9, putative, expressed -
20 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G527700 Sobic001G527700 Sobic002G067800 Sobic002G067800 Sobic001G527700--Sobic002G067800 Sobic010G235800 Sobic010G235800 Sobic001G527700--Sobic010G235800 Sobic008G165100 Sobic008G165100 Sobic001G527700--Sobic008G165100 Sobic010G194700 Sobic010G194700 Sobic001G527700--Sobic010G194700 Sobic005G025300 Sobic005G025300 Sobic001G527700--Sobic005G025300 Sobic006G278200 Sobic006G278200 Sobic001G527700--Sobic006G278200 Sobic001G405300 Sobic001G405300 Sobic001G527700--Sobic001G405300 Sobic005G198200 Sobic005G198200 Sobic001G527700--Sobic005G198200 Sobic005G072400 Sobic005G072400 Sobic001G527700--Sobic005G072400 Sobic002G067800--Sobic010G194700 Sobic002G067800--Sobic008G165100 Sobic005G059100 Sobic005G059100 Sobic002G067800--Sobic005G059100 Sobic002G095700 Sobic002G095700 Sobic002G067800--Sobic002G095700 Sobic008G073000 Sobic008G073000 Sobic002G067800--Sobic008G073000 Sobic002G159200 Sobic002G159200 Sobic002G067800--Sobic002G159200 Sobic003G355000 Sobic003G355000 Sobic002G067800--Sobic003G355000 Sobic007G043500 Sobic007G043500 Sobic002G067800--Sobic007G043500 Sobic006G123900 Sobic006G123900 Sobic002G067800--Sobic006G123900 Sobic010G279900 Sobic010G279900 Sobic010G235800--Sobic010G279900 Sobic003G427100 Sobic003G427100 Sobic010G235800--Sobic003G427100 Sobic010G278600 Sobic010G278600 Sobic010G235800--Sobic010G278600 Sobic005G046900 Sobic005G046900 Sobic010G235800--Sobic005G046900 Sobic009G074700 Sobic009G074700 Sobic010G235800--Sobic009G074700 Sobic001G246500 Sobic001G246500 Sobic010G235800--Sobic001G246500 Sobic005G199200 Sobic005G199200 Sobic010G235800--Sobic005G199200 Sobic005G079800 Sobic005G079800 Sobic010G235800--Sobic005G079800 Sobic008G173100 Sobic008G173100 Sobic010G235800--Sobic008G173100 Sobic008G165100--Sobic002G067800 Sobic008G165100--Sobic010G194700 Sobic008G165100--Sobic008G073000 Sobic005G030300 Sobic005G030300 Sobic008G165100--Sobic005G030300 Sobic008G165100--Sobic002G095700 Sobic008G165100--Sobic006G123900 Sobic002G151600 Sobic002G151600 Sobic008G165100--Sobic002G151600 Sobic003G433500 Sobic003G433500 Sobic008G165100--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic008G165100--Sobic002G045400 Sobic010G194700--Sobic002G067800 Sobic001G206100 Sobic001G206100 Sobic010G194700--Sobic001G206100 Sobic010G194700--Sobic008G165100 Sobic010G194700--Sobic002G151600 Sobic004G213000 Sobic004G213000 Sobic010G194700--Sobic004G213000 Sobic010G194700--Sobic005G059100 Sobic006G013500 Sobic006G013500 Sobic010G194700--Sobic006G013500 Sobic010G194700--Sobic005G079800 Sobic003G197800 Sobic003G197800 Sobic010G194700--Sobic003G197800 Sobic001G043400 Sobic001G043400 Sobic005G025300--Sobic001G043400 Sobic001G294100 Sobic001G294100 Sobic005G025300--Sobic001G294100 Sobic005G025300--Sobic010G278600 Sobic001G373400 Sobic001G373400 Sobic005G025300--Sobic001G373400 Sobic010G055800 Sobic010G055800 Sobic005G025300--Sobic010G055800 Sobic002G227200 Sobic002G227200 Sobic005G025300--Sobic002G227200 Sobic003G368800 Sobic003G368800 Sobic005G025300--Sobic003G368800 Sobic004G236800 Sobic004G236800 Sobic005G025300--Sobic004G236800 Sobic006G078600 Sobic006G078600 Sobic005G025300--Sobic006G078600 Sobic006G278200--Sobic002G095700 Sobic006G278200--Sobic008G073000 Sobic006G278200--Sobic005G072400 Sobic006G278200--Sobic005G030300 Sobic001G202266 Sobic001G202266 Sobic006G278200--Sobic001G202266 Sobic002G341100 Sobic002G341100 Sobic006G278200--Sobic002G341100 Sobic009G137900 Sobic009G137900 Sobic006G278200--Sobic009G137900 Sobic002G089900 Sobic002G089900 Sobic006G278200--Sobic002G089900 Sobic006G278200--Sobic002G067800 Sobic006G046700 Sobic006G046700 Sobic001G405300--Sobic006G046700 Sobic007G026000 Sobic007G026000 Sobic001G405300--Sobic007G026000 Sobic001G405300--Sobic002G159200 Sobic006G161000 Sobic006G161000 Sobic001G405300--Sobic006G161000 Sobic001G405300--Sobic005G059100 Sobic001G405300--Sobic007G043500 Sobic001G405300--Sobic006G013500 Sobic006G186400 Sobic006G186400 Sobic001G405300--Sobic006G186400 Sobic004G031700 Sobic004G031700 Sobic001G405300--Sobic004G031700 Sobic009G059400 Sobic009G059400 Sobic005G198200--Sobic009G059400 Sobic009G113100 Sobic009G113100 Sobic005G198200--Sobic009G113100 Sobic005G198200--Sobic009G137900 Sobic005G198200--Sobic005G072400 Sobic009G017200 Sobic009G017200 Sobic005G198200--Sobic009G017200 Sobic001G472100 Sobic001G472100 Sobic005G198200--Sobic001G472100 Sobic008G111800 Sobic008G111800 Sobic005G198200--Sobic008G111800 Sobic004G180900 Sobic004G180900 Sobic005G198200--Sobic004G180900 Sobic010G077500 Sobic010G077500 Sobic005G198200--Sobic010G077500 Sobic005G072400--Sobic006G278200 Sobic002G253600 Sobic002G253600 Sobic005G072400--Sobic002G253600 Sobic005G072400--Sobic005G198200 Sobic003G343600 Sobic003G343600 Sobic005G072400--Sobic003G343600 Sobic005G072400--Sobic009G137900 Sobic001G230500 Sobic001G230500 Sobic005G072400--Sobic001G230500 Sobic003G415100 Sobic003G415100 Sobic005G072400--Sobic003G415100 Sobic005G072400--Sobic002G159200 Sobic006G261100 Sobic006G261100 Sobic005G072400--Sobic006G261100
Octagon: transcription factors


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