Gene annotation
Transcriptome id Sobic.003G084750.1
Synonym -
Functional annotation -
UniProt A0A1W0VWA7
Pfam -
Panther DB PTHR37385 PTHR37385:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51545 : low psii accumulation2
RAP-DB (Rice) LOC_Os02g03250.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
2 Sobic.008G129100 expressed protein -
3 Sobic.006G130200 expressed protein -
4 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
5 Sobic.001G109500 OsFBX85 - F-box domain containing protein, expressed -
6 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
7 Sobic.010G264400 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
8 Sobic.005G180700 zinc finger, C3HC4 type family protein, expressed -
9 Sobic.004G152000 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
12 Sobic.001G035500 expressed protein -
13 Sobic.002G067100 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
14 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
15 Sobic.010G074900 G protein coupled receptor, putative, expressed -
16 Sobic.001G122000 oxysterol-binding protein, putative, expressed -
17 Sobic.007G115900 SAM domain family protein, expressed -
18 Sobic.005G154700 OsFBX407 - F-box domain containing protein, expressed -
19 Sobic.004G072800 expressed protein -
20 Sobic.006G175400 OsFBK22 - F-box domain and kelch repeat containing protein, expressed -


Gene co-expression network
sample Sobic003G084750 Sobic003G084750 Sobic009G032300 Sobic009G032300 Sobic003G084750--Sobic009G032300 Sobic008G129100 Sobic008G129100 Sobic003G084750--Sobic008G129100 Sobic006G130200 Sobic006G130200 Sobic003G084750--Sobic006G130200 Sobic010G174800 Sobic010G174800 Sobic003G084750--Sobic010G174800 Sobic001G109500 Sobic001G109500 Sobic003G084750--Sobic001G109500 Sobic003G051200 Sobic003G051200 Sobic003G084750--Sobic003G051200 Sobic010G264400 Sobic010G264400 Sobic003G084750--Sobic010G264400 Sobic005G180700 Sobic005G180700 Sobic003G084750--Sobic005G180700 Sobic004G152000 Sobic004G152000 Sobic003G084750--Sobic004G152000 Sobic009G032300--Sobic010G264400 Sobic009G032300--Sobic006G130200 Sobic006G092800 Sobic006G092800 Sobic009G032300--Sobic006G092800 Sobic009G032300--Sobic010G174800 Sobic006G128800 Sobic006G128800 Sobic009G032300--Sobic006G128800 Sobic002G197100 Sobic002G197100 Sobic009G032300--Sobic002G197100 Sobic007G115900 Sobic007G115900 Sobic009G032300--Sobic007G115900 Sobic001G221100 Sobic001G221100 Sobic009G032300--Sobic001G221100 Sobic007G191100 Sobic007G191100 Sobic009G032300--Sobic007G191100 Sobic004G007300 Sobic004G007300 Sobic008G129100--Sobic004G007300 Sobic002G388200 Sobic002G388200 Sobic008G129100--Sobic002G388200 Sobic004G283000 Sobic004G283000 Sobic008G129100--Sobic004G283000 Sobic006G173100 Sobic006G173100 Sobic008G129100--Sobic006G173100 Sobic003G248500 Sobic003G248500 Sobic008G129100--Sobic003G248500 Sobic003G008500 Sobic003G008500 Sobic008G129100--Sobic003G008500 Sobic008G129100--Sobic002G197100 Sobic006G082900 Sobic006G082900 Sobic008G129100--Sobic006G082900 Sobic008G129100--Sobic003G051200 Sobic006G130200--Sobic006G128800 Sobic004G218300 Sobic004G218300 Sobic006G130200--Sobic004G218300 Sobic006G130200--Sobic010G174800 Sobic006G130200--Sobic009G032300 Sobic003G398400 Sobic003G398400 Sobic006G130200--Sobic003G398400 Sobic001G425000 Sobic001G425000 Sobic006G130200--Sobic001G425000 Sobic006G130200--Sobic006G092800 Sobic003G336800 Sobic003G336800 Sobic006G130200--Sobic003G336800 Sobic001G235000 Sobic001G235000 Sobic006G130200--Sobic001G235000 Sobic010G174800--Sobic003G248500 Sobic010G174800--Sobic006G128800 Sobic003G185200 Sobic003G185200 Sobic010G174800--Sobic003G185200 Sobic003G359300 Sobic003G359300 Sobic010G174800--Sobic003G359300 Sobic010G174800--Sobic006G130200 Sobic010G174800--Sobic003G336800 Sobic004G263900 Sobic004G263900 Sobic010G174800--Sobic004G263900 Sobic001G390500 Sobic001G390500 Sobic010G174800--Sobic001G390500 Sobic001G028400 Sobic001G028400 Sobic010G174800--Sobic001G028400 Sobic006G175400 Sobic006G175400 Sobic001G109500--Sobic006G175400 Sobic010G199800 Sobic010G199800 Sobic001G109500--Sobic010G199800 Sobic010G074900 Sobic010G074900 Sobic001G109500--Sobic010G074900 Sobic001G109500--Sobic003G084750 Sobic004G015800 Sobic004G015800 Sobic001G109500--Sobic004G015800 Sobic001G109500--Sobic004G007300 Sobic001G109500--Sobic010G174800 Sobic008G058800 Sobic008G058800 Sobic001G109500--Sobic008G058800 Sobic001G109500--Sobic006G130200 Sobic003G051200--Sobic003G248500 Sobic003G051200--Sobic004G283000 Sobic003G051200--Sobic001G390500 Sobic002G378200 Sobic002G378200 Sobic003G051200--Sobic002G378200 Sobic007G111100 Sobic007G111100 Sobic003G051200--Sobic007G111100 Sobic002G365100 Sobic002G365100 Sobic003G051200--Sobic002G365100 Sobic003G051200--Sobic002G388200 Sobic001G083600 Sobic001G083600 Sobic003G051200--Sobic001G083600 Sobic001G371200 Sobic001G371200 Sobic003G051200--Sobic001G371200 Sobic010G264400--Sobic009G032300 Sobic010G145900 Sobic010G145900 Sobic010G264400--Sobic010G145900 Sobic010G264400--Sobic004G283000 Sobic010G264400--Sobic003G248500 Sobic010G264400--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic010G264400--Sobic001G514000 Sobic010G264400--Sobic006G128800 Sobic010G264400--Sobic004G007300 Sobic002G157300 Sobic002G157300 Sobic010G264400--Sobic002G157300 Sobic005G180700--Sobic010G174800 Sobic003G273500 Sobic003G273500 Sobic005G180700--Sobic003G273500 Sobic005G180700--Sobic001G028400 Sobic005G180700--Sobic003G185200 Sobic008G192000 Sobic008G192000 Sobic005G180700--Sobic008G192000 Sobic001G061700 Sobic001G061700 Sobic005G180700--Sobic001G061700 Sobic005G180700--Sobic010G074900 Sobic006G267300 Sobic006G267300 Sobic005G180700--Sobic006G267300 Sobic005G180700--Sobic001G390500 Sobic004G152000--Sobic010G174800 Sobic003G389800 Sobic003G389800 Sobic004G152000--Sobic003G389800 Sobic010G063300 Sobic010G063300 Sobic004G152000--Sobic010G063300 Sobic004G152000--Sobic001G390500 Sobic002G121000 Sobic002G121000 Sobic004G152000--Sobic002G121000 Sobic002G088700 Sobic002G088700 Sobic004G152000--Sobic002G088700 Sobic004G152000--Sobic001G061700 Sobic004G152000--Sobic003G248500 Sobic004G152000--Sobic003G084750
Octagon: transcription factors


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