Gene annotation
Transcriptome id Sobic.001G035500.1,Sobic.001G035500.2,Sobic.001G035500.4,Sobic.001G035500.3
Synonym Sb01g003320
Functional annotation expressed protein
UniProt A0A1Z5S459 , C5WV21 , A0A1Z5S484
Pfam PF14309
Panther DB PTHR21726 PTHR21726:SF50
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53540 : -
RAP-DB (Rice) LOC_Os03g60520.1 : expressed protein
MaizeGDB (Corn) Zm00025a016439 , Zm00025a029566 , Zm00025a008793
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
2 Sobic.010G264400 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.009G154800 syntaxin 6, N-terminal domain containing protein, expressed -
4 Sobic.008G129100 expressed protein -
5 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
6 Sobic.004G002400 expressed protein -
7 Sobic.010G145900 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
8 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
9 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
10 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
11 Sobic.003G084750 - -
12 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
14 Sobic.009G228700 expressed protein -
15 Sobic.003G377800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
16 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
18 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
19 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
20 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta


Gene co-expression network
sample Sobic001G035500 Sobic001G035500 Sobic003G433100 Sobic003G433100 Sobic001G035500--Sobic003G433100 Sobic010G264400 Sobic010G264400 Sobic001G035500--Sobic010G264400 Sobic009G154800 Sobic009G154800 Sobic001G035500--Sobic009G154800 Sobic008G129100 Sobic008G129100 Sobic001G035500--Sobic008G129100 Sobic001G351700 Sobic001G351700 Sobic001G035500--Sobic001G351700 Sobic004G002400 Sobic004G002400 Sobic001G035500--Sobic004G002400 Sobic010G145900 Sobic010G145900 Sobic001G035500--Sobic010G145900 Sobic004G295800 Sobic004G295800 Sobic001G035500--Sobic004G295800 Sobic006G148200 Sobic006G148200 Sobic001G035500--Sobic006G148200 Sobic009G193400 Sobic009G193400 Sobic003G433100--Sobic009G193400 Sobic001G478300 Sobic001G478300 Sobic003G433100--Sobic001G478300 Sobic007G062600 Sobic007G062600 Sobic003G433100--Sobic007G062600 Sobic003G433100--Sobic004G295800 Sobic004G006200 Sobic004G006200 Sobic003G433100--Sobic004G006200 Sobic003G433100--Sobic009G154800 Sobic009G228700 Sobic009G228700 Sobic003G433100--Sobic009G228700 Sobic002G424000 Sobic002G424000 Sobic003G433100--Sobic002G424000 Sobic004G021100 Sobic004G021100 Sobic003G433100--Sobic004G021100 Sobic009G032300 Sobic009G032300 Sobic010G264400--Sobic009G032300 Sobic010G264400--Sobic010G145900 Sobic004G283000 Sobic004G283000 Sobic010G264400--Sobic004G283000 Sobic003G248500 Sobic003G248500 Sobic010G264400--Sobic003G248500 Sobic002G197100 Sobic002G197100 Sobic010G264400--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic010G264400--Sobic001G514000 Sobic006G128800 Sobic006G128800 Sobic010G264400--Sobic006G128800 Sobic004G007300 Sobic004G007300 Sobic010G264400--Sobic004G007300 Sobic002G157300 Sobic002G157300 Sobic010G264400--Sobic002G157300 Sobic009G154800--Sobic003G433100 Sobic003G007500 Sobic003G007500 Sobic009G154800--Sobic003G007500 Sobic001G051200 Sobic001G051200 Sobic009G154800--Sobic001G051200 Sobic001G371200 Sobic001G371200 Sobic009G154800--Sobic001G371200 Sobic009G154800--Sobic001G478300 Sobic004G350100 Sobic004G350100 Sobic009G154800--Sobic004G350100 Sobic009G056800 Sobic009G056800 Sobic009G154800--Sobic009G056800 Sobic006G209500 Sobic006G209500 Sobic009G154800--Sobic006G209500 Sobic010G058500 Sobic010G058500 Sobic009G154800--Sobic010G058500 Sobic008G129100--Sobic004G007300 Sobic002G388200 Sobic002G388200 Sobic008G129100--Sobic002G388200 Sobic008G129100--Sobic004G283000 Sobic006G173100 Sobic006G173100 Sobic008G129100--Sobic006G173100 Sobic008G129100--Sobic003G248500 Sobic003G008500 Sobic003G008500 Sobic008G129100--Sobic003G008500 Sobic008G129100--Sobic002G197100 Sobic006G082900 Sobic006G082900 Sobic008G129100--Sobic006G082900 Sobic003G051200 Sobic003G051200 Sobic008G129100--Sobic003G051200 Sobic007G134600 Sobic007G134600 Sobic001G351700--Sobic007G134600 Sobic004G267300 Sobic004G267300 Sobic001G351700--Sobic004G267300 Sobic001G290200 Sobic001G290200 Sobic001G351700--Sobic001G290200 Sobic001G351700--Sobic004G021100 Sobic001G351700--Sobic009G056800 Sobic001G306000 Sobic001G306000 Sobic001G351700--Sobic001G306000 Sobic001G351700--Sobic003G433100 Sobic009G172400 Sobic009G172400 Sobic001G351700--Sobic009G172400 Sobic001G351700--Sobic001G371200 Sobic001G281100 Sobic001G281100 Sobic004G002400--Sobic001G281100 Sobic004G039600 Sobic004G039600 Sobic004G002400--Sobic004G039600 Sobic003G187500 Sobic003G187500 Sobic004G002400--Sobic003G187500 Sobic007G132100 Sobic007G132100 Sobic004G002400--Sobic007G132100 Sobic006G126100 Sobic006G126100 Sobic004G002400--Sobic006G126100 Sobic001G124200 Sobic001G124200 Sobic004G002400--Sobic001G124200 Sobic001G466700 Sobic001G466700 Sobic004G002400--Sobic001G466700 Sobic009G249200 Sobic009G249200 Sobic004G002400--Sobic009G249200 Sobic001G534800 Sobic001G534800 Sobic004G002400--Sobic001G534800 Sobic010G145900--Sobic010G264400 Sobic003G305400 Sobic003G305400 Sobic010G145900--Sobic003G305400 Sobic010G145900--Sobic006G209500 Sobic004G263900 Sobic004G263900 Sobic010G145900--Sobic004G263900 Sobic001G372000 Sobic001G372000 Sobic010G145900--Sobic001G372000 Sobic003G185200 Sobic003G185200 Sobic010G145900--Sobic003G185200 Sobic010G145900--Sobic001G478300 Sobic010G260500 Sobic010G260500 Sobic010G145900--Sobic010G260500 Sobic010G145900--Sobic004G350100 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G295800--Sobic007G024700 Sobic009G121100 Sobic009G121100 Sobic004G295800--Sobic009G121100 Sobic004G295800--Sobic004G006200 Sobic004G295800--Sobic004G021100 Sobic001G373200 Sobic001G373200 Sobic004G295800--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic001G085100 Sobic001G085100 Sobic006G148200--Sobic001G085100 Sobic006G034000 Sobic006G034000 Sobic006G148200--Sobic006G034000 Sobic001G323000 Sobic001G323000 Sobic006G148200--Sobic001G323000 Sobic006G148200--Sobic009G228700 Sobic001G033500 Sobic001G033500 Sobic006G148200--Sobic001G033500 Sobic001G206900 Sobic001G206900 Sobic006G148200--Sobic001G206900 Sobic010G000900 Sobic010G000900 Sobic006G148200--Sobic010G000900 Sobic001G048700 Sobic001G048700 Sobic006G148200--Sobic001G048700
Octagon: transcription factors


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