Gene annotation
Transcriptome id Sobic.010G145900.1
Synonym UBDKGAMMA4, PI4KGAMMA4, ATPI4KGAMMA4, Sb10g019340
Functional annotation phosphatidylinositol 3- and 4-kinase family protein, putative, expressed
UniProt C5Z345
Pfam PF00240 PF00454
Panther DB PTHR10666 PTHR10666:SF163
NCBI CDD KOG2381; Phosphatidylinositol 4-kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0016773phosphotransferase activity, alcohol group as acceptor


Orthologs (automatic annotation)
TAIR AT2G46500 : phosphoinositide 4-kinase gamma 4
RAP-DB (Rice) LOC_Os06g23290.2 : phosphatidylinositol 3- and 4-kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a050773 , Zm00025a042383
Brachypodium -
Barley HORVU7Hr1G081930.2 , HORVU7Hr1G081930.3 , HORVU7Hr1G081930.1 , HORVU7Hr1G081930.4 , HORVU7Hr1G081930.5
Wheat TraesCS7D02G340200 , TraesCS7B02G243500 , TraesCS7A02G332000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G145900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G264400 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
3 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
4 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
5 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
6 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
7 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
8 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
9 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
10 Sobic.003G377800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
11 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
12 Sobic.006G128800 expressed protein -
13 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
14 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
15 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
16 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
17 Sobic.002G132300 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
18 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
19 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
20 Sobic.009G172400 VHS and GAT domain containing protein, expressed -


Gene co-expression network
sample Sobic010G145900 Sobic010G145900 Sobic010G264400 Sobic010G264400 Sobic010G145900--Sobic010G264400 Sobic003G305400 Sobic003G305400 Sobic010G145900--Sobic003G305400 Sobic006G209500 Sobic006G209500 Sobic010G145900--Sobic006G209500 Sobic004G263900 Sobic004G263900 Sobic010G145900--Sobic004G263900 Sobic001G372000 Sobic001G372000 Sobic010G145900--Sobic001G372000 Sobic003G185200 Sobic003G185200 Sobic010G145900--Sobic003G185200 Sobic001G478300 Sobic001G478300 Sobic010G145900--Sobic001G478300 Sobic010G260500 Sobic010G260500 Sobic010G145900--Sobic010G260500 Sobic004G350100 Sobic004G350100 Sobic010G145900--Sobic004G350100 Sobic009G032300 Sobic009G032300 Sobic010G264400--Sobic009G032300 Sobic010G264400--Sobic010G145900 Sobic004G283000 Sobic004G283000 Sobic010G264400--Sobic004G283000 Sobic003G248500 Sobic003G248500 Sobic010G264400--Sobic003G248500 Sobic002G197100 Sobic002G197100 Sobic010G264400--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic010G264400--Sobic001G514000 Sobic006G128800 Sobic006G128800 Sobic010G264400--Sobic006G128800 Sobic004G007300 Sobic004G007300 Sobic010G264400--Sobic004G007300 Sobic002G157300 Sobic002G157300 Sobic010G264400--Sobic002G157300 Sobic003G305400--Sobic010G145900 Sobic009G235900 Sobic009G235900 Sobic003G305400--Sobic009G235900 Sobic003G305400--Sobic006G209500 Sobic003G305400--Sobic001G478300 Sobic001G347600 Sobic001G347600 Sobic003G305400--Sobic001G347600 Sobic003G305400--Sobic001G372000 Sobic003G154700 Sobic003G154700 Sobic003G305400--Sobic003G154700 Sobic003G081100 Sobic003G081100 Sobic003G305400--Sobic003G081100 Sobic003G305400--Sobic010G264400 Sobic006G209500--Sobic001G478300 Sobic004G271900 Sobic004G271900 Sobic006G209500--Sobic004G271900 Sobic006G088100 Sobic006G088100 Sobic006G209500--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic006G209500--Sobic003G093600 Sobic002G324200 Sobic002G324200 Sobic006G209500--Sobic002G324200 Sobic009G117400 Sobic009G117400 Sobic006G209500--Sobic009G117400 Sobic004G150400 Sobic004G150400 Sobic006G209500--Sobic004G150400 Sobic002G262600 Sobic002G262600 Sobic006G209500--Sobic002G262600 Sobic007G205800 Sobic007G205800 Sobic006G209500--Sobic007G205800 Sobic010G055500 Sobic010G055500 Sobic004G263900--Sobic010G055500 Sobic010G071200 Sobic010G071200 Sobic004G263900--Sobic010G071200 Sobic001G056200 Sobic001G056200 Sobic004G263900--Sobic001G056200 Sobic003G359300 Sobic003G359300 Sobic004G263900--Sobic003G359300 Sobic008G174300 Sobic008G174300 Sobic004G263900--Sobic008G174300 Sobic007G063200 Sobic007G063200 Sobic004G263900--Sobic007G063200 Sobic004G263900--Sobic010G260500 Sobic001G028400 Sobic001G028400 Sobic004G263900--Sobic001G028400 Sobic002G084300 Sobic002G084300 Sobic004G263900--Sobic002G084300 Sobic001G467000 Sobic001G467000 Sobic001G372000--Sobic001G467000 Sobic001G372000--Sobic004G150400 Sobic001G372000--Sobic010G145900 Sobic001G372000--Sobic006G209500 Sobic001G512600 Sobic001G512600 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G291100 Sobic001G291100 Sobic001G372000--Sobic001G291100 Sobic001G372000--Sobic001G478300 Sobic001G372000--Sobic003G305400 Sobic002G365100 Sobic002G365100 Sobic003G185200--Sobic002G365100 Sobic010G174800 Sobic010G174800 Sobic003G185200--Sobic010G174800 Sobic003G185200--Sobic003G248500 Sobic010G202600 Sobic010G202600 Sobic003G185200--Sobic010G202600 Sobic003G261300 Sobic003G261300 Sobic003G185200--Sobic003G261300 Sobic010G000700 Sobic010G000700 Sobic003G185200--Sobic010G000700 Sobic003G185200--Sobic006G128800 Sobic003G185200--Sobic004G263900 Sobic003G336800 Sobic003G336800 Sobic003G185200--Sobic003G336800 Sobic004G231400 Sobic004G231400 Sobic001G478300--Sobic004G231400 Sobic001G478300--Sobic010G071200 Sobic001G478300--Sobic006G209500 Sobic001G427800 Sobic001G427800 Sobic001G478300--Sobic001G427800 Sobic001G149700 Sobic001G149700 Sobic001G478300--Sobic001G149700 Sobic001G478300--Sobic010G055500 Sobic001G478300--Sobic004G263900 Sobic003G273100 Sobic003G273100 Sobic001G478300--Sobic003G273100 Sobic004G274700 Sobic004G274700 Sobic001G478300--Sobic004G274700 Sobic010G260500--Sobic002G157300 Sobic010G260500--Sobic008G174300 Sobic007G078000 Sobic007G078000 Sobic010G260500--Sobic007G078000 Sobic007G185900 Sobic007G185900 Sobic010G260500--Sobic007G185900 Sobic010G033400 Sobic010G033400 Sobic010G260500--Sobic010G033400 Sobic001G451000 Sobic001G451000 Sobic010G260500--Sobic001G451000 Sobic010G260500--Sobic004G263900 Sobic005G149500 Sobic005G149500 Sobic010G260500--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic010G260500--Sobic003G187400 Sobic007G118200 Sobic007G118200 Sobic004G350100--Sobic007G118200 Sobic004G350100--Sobic010G033400 Sobic006G252700 Sobic006G252700 Sobic004G350100--Sobic006G252700 Sobic003G081000 Sobic003G081000 Sobic004G350100--Sobic003G081000 Sobic004G350100--Sobic004G007300 Sobic009G056800 Sobic009G056800 Sobic004G350100--Sobic009G056800 Sobic004G350100--Sobic004G283000 Sobic001G143500 Sobic001G143500 Sobic004G350100--Sobic001G143500 Sobic004G350100--Sobic001G028400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.