Gene annotation
Transcriptome id Sobic.001G109500.2,Sobic.001G109500.1
Synonym Sb01g009780
Functional annotation OsFBX85 - F-box domain containing protein, expressed
UniProt C5WMW9
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF116
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G11620 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os03g47420.1 : OsFBX107 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1D02G277000 , TraesCS1A02G277800 , TraesCS1B02G286700
Populus -


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cDNA sequences
Sobic.001G109500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G175400 OsFBK22 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.010G199800 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
3 Sobic.010G074900 G protein coupled receptor, putative, expressed -
4 Sobic.003G084750 - -
5 Sobic.004G015800 zinc carboxypeptidase family protein, putative, expressed -
6 Sobic.004G007300 expressed protein -
7 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
8 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
9 Sobic.006G130200 expressed protein -
10 Sobic.006G128800 expressed protein -
11 Sobic.003G389800 nucleotide-sugar transporter family protein, putative, expressed -
12 Sobic.008G129100 expressed protein -
13 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
14 Sobic.001G122000 oxysterol-binding protein, putative, expressed -
15 Sobic.003G205501 - -
16 Sobic.008G192000 yippee zinc-binding protein, putative, expressed -
17 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
18 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
19 Sobic.005G143400 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
20 Sobic.005G180700 zinc finger, C3HC4 type family protein, expressed -


Gene co-expression network
sample Sobic001G109500 Sobic001G109500 Sobic006G175400 Sobic006G175400 Sobic001G109500--Sobic006G175400 Sobic010G199800 Sobic010G199800 Sobic001G109500--Sobic010G199800 Sobic010G074900 Sobic010G074900 Sobic001G109500--Sobic010G074900 Sobic003G084750 Sobic003G084750 Sobic001G109500--Sobic003G084750 Sobic004G015800 Sobic004G015800 Sobic001G109500--Sobic004G015800 Sobic004G007300 Sobic004G007300 Sobic001G109500--Sobic004G007300 Sobic010G174800 Sobic010G174800 Sobic001G109500--Sobic010G174800 Sobic008G058800 Sobic008G058800 Sobic001G109500--Sobic008G058800 Sobic006G130200 Sobic006G130200 Sobic001G109500--Sobic006G130200 Sobic006G175400--Sobic008G058800 Sobic006G175400--Sobic001G109500 Sobic003G205501 Sobic003G205501 Sobic006G175400--Sobic003G205501 Sobic006G175400--Sobic004G015800 Sobic006G175400--Sobic010G074900 Sobic001G517500 Sobic001G517500 Sobic006G175400--Sobic001G517500 Sobic001G408700 Sobic001G408700 Sobic006G175400--Sobic001G408700 Sobic008G192000 Sobic008G192000 Sobic006G175400--Sobic008G192000 Sobic001G514000 Sobic001G514000 Sobic006G175400--Sobic001G514000 Sobic002G061400 Sobic002G061400 Sobic010G199800--Sobic002G061400 Sobic003G336800 Sobic003G336800 Sobic010G199800--Sobic003G336800 Sobic010G199800--Sobic010G174800 Sobic010G199800--Sobic006G130200 Sobic001G425000 Sobic001G425000 Sobic010G199800--Sobic001G425000 Sobic002G197100 Sobic002G197100 Sobic010G199800--Sobic002G197100 Sobic004G349900 Sobic004G349900 Sobic010G199800--Sobic004G349900 Sobic006G128800 Sobic006G128800 Sobic010G199800--Sobic006G128800 Sobic001G202266 Sobic001G202266 Sobic010G199800--Sobic001G202266 Sobic004G345700 Sobic004G345700 Sobic010G074900--Sobic004G345700 Sobic010G074900--Sobic003G205501 Sobic010G074900--Sobic001G408700 Sobic001G193100 Sobic001G193100 Sobic010G074900--Sobic001G193100 Sobic004G084500 Sobic004G084500 Sobic010G074900--Sobic004G084500 Sobic006G091000 Sobic006G091000 Sobic010G074900--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic010G074900--Sobic005G040900 Sobic010G074900--Sobic004G007300 Sobic003G398400 Sobic003G398400 Sobic010G074900--Sobic003G398400 Sobic009G032300 Sobic009G032300 Sobic003G084750--Sobic009G032300 Sobic008G129100 Sobic008G129100 Sobic003G084750--Sobic008G129100 Sobic003G084750--Sobic006G130200 Sobic003G084750--Sobic010G174800 Sobic003G084750--Sobic001G109500 Sobic003G051200 Sobic003G051200 Sobic003G084750--Sobic003G051200 Sobic010G264400 Sobic010G264400 Sobic003G084750--Sobic010G264400 Sobic005G180700 Sobic005G180700 Sobic003G084750--Sobic005G180700 Sobic004G152000 Sobic004G152000 Sobic003G084750--Sobic004G152000 Sobic001G235000 Sobic001G235000 Sobic004G015800--Sobic001G235000 Sobic004G015800--Sobic001G408700 Sobic004G015800--Sobic004G007300 Sobic004G015800--Sobic006G128800 Sobic004G015800--Sobic004G345700 Sobic006G092800 Sobic006G092800 Sobic004G015800--Sobic006G092800 Sobic004G015800--Sobic001G514000 Sobic004G015800--Sobic010G174800 Sobic006G244300 Sobic006G244300 Sobic004G015800--Sobic006G244300 Sobic004G007300--Sobic002G197100 Sobic004G007300--Sobic001G408700 Sobic004G007300--Sobic004G345700 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic006G173100 Sobic006G173100 Sobic004G007300--Sobic006G173100 Sobic004G283000 Sobic004G283000 Sobic004G007300--Sobic004G283000 Sobic004G007300--Sobic008G129100 Sobic001G056200 Sobic001G056200 Sobic004G007300--Sobic001G056200 Sobic003G248500 Sobic003G248500 Sobic010G174800--Sobic003G248500 Sobic010G174800--Sobic006G128800 Sobic003G185200 Sobic003G185200 Sobic010G174800--Sobic003G185200 Sobic003G359300 Sobic003G359300 Sobic010G174800--Sobic003G359300 Sobic010G174800--Sobic006G130200 Sobic010G174800--Sobic003G336800 Sobic004G263900 Sobic004G263900 Sobic010G174800--Sobic004G263900 Sobic001G390500 Sobic001G390500 Sobic010G174800--Sobic001G390500 Sobic001G028400 Sobic001G028400 Sobic010G174800--Sobic001G028400 Sobic001G042200 Sobic001G042200 Sobic008G058800--Sobic001G042200 Sobic009G129600 Sobic009G129600 Sobic008G058800--Sobic009G129600 Sobic006G248500 Sobic006G248500 Sobic008G058800--Sobic006G248500 Sobic008G058800--Sobic003G205501 Sobic010G077500 Sobic010G077500 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G127400 Sobic008G127400 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic006G130200--Sobic006G128800 Sobic004G218300 Sobic004G218300 Sobic006G130200--Sobic004G218300 Sobic006G130200--Sobic010G174800 Sobic006G130200--Sobic009G032300 Sobic006G130200--Sobic003G398400 Sobic006G130200--Sobic001G425000 Sobic006G130200--Sobic006G092800 Sobic006G130200--Sobic003G336800 Sobic006G130200--Sobic001G235000
Octagon: transcription factors


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