Gene annotation
Transcriptome id Sobic.005G079500.1
Synonym Sb05g006490
Functional annotation OsFBX399 - F-box domain containing protein, expressed
UniProt A0A1B6PQX0
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF81
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G02930 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g09418.1 : OsFBX399 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ89033
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G025700 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
2 Sobic.008G014300 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
3 Sobic.005G044300 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
4 Sobic.004G123000 expressed protein -
5 Sobic.010G197900 expressed protein -
6 Sobic.003G074900 expressed protein -
7 Sobic.001G290766 - -
8 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
9 Sobic.009G001900 expressed protein -
10 Sobic.009G054000 expressed protein -
11 Sobic.003G377700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
12 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
13 Sobic.002G387800 - K12456: anaphase-promoting complex subunit 13
14 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
15 Sobic.007G219800 cytochrome c oxidase assembly protein COX15, putative, expressed K02259: COX15, cytochrome c oxidase assembly protein subunit 15
16 Sobic.002G262200 expressed protein -
17 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
18 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
19 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
20 Sobic.004G164000 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase


Gene co-expression network
sample Sobic005G079500 Sobic005G079500 Sobic008G025700 Sobic008G025700 Sobic005G079500--Sobic008G025700 Sobic008G014300 Sobic008G014300 Sobic005G079500--Sobic008G014300 Sobic005G044300 Sobic005G044300 Sobic005G079500--Sobic005G044300 Sobic004G123000 Sobic004G123000 Sobic005G079500--Sobic004G123000 Sobic010G197900 Sobic010G197900 Sobic005G079500--Sobic010G197900 Sobic003G074900 Sobic003G074900 Sobic005G079500--Sobic003G074900 Sobic001G290766 Sobic001G290766 Sobic005G079500--Sobic001G290766 Sobic006G124300 Sobic006G124300 Sobic005G079500--Sobic006G124300 Sobic009G001900 Sobic009G001900 Sobic005G079500--Sobic009G001900 Sobic004G164000 Sobic004G164000 Sobic008G025700--Sobic004G164000 Sobic008G084100 Sobic008G084100 Sobic008G025700--Sobic008G084100 Sobic008G025700--Sobic003G074900 Sobic008G025700--Sobic005G079500 Sobic008G025700--Sobic009G001900 Sobic002G387800 Sobic002G387800 Sobic008G025700--Sobic002G387800 Sobic001G035400 Sobic001G035400 Sobic008G025700--Sobic001G035400 Sobic004G294900 Sobic004G294900 Sobic008G025700--Sobic004G294900 Sobic001G013200 Sobic001G013200 Sobic008G025700--Sobic001G013200 Sobic008G014300--Sobic001G013200 Sobic003G167000 Sobic003G167000 Sobic008G014300--Sobic003G167000 Sobic002G217500 Sobic002G217500 Sobic008G014300--Sobic002G217500 Sobic006G203900 Sobic006G203900 Sobic008G014300--Sobic006G203900 Sobic009G206600 Sobic009G206600 Sobic008G014300--Sobic009G206600 Sobic008G014300--Sobic005G079500 Sobic008G014300--Sobic006G124300 Sobic010G235000 Sobic010G235000 Sobic008G014300--Sobic010G235000 Sobic002G342000 Sobic002G342000 Sobic008G014300--Sobic002G342000 Sobic008G018300 Sobic008G018300 Sobic005G044300--Sobic008G018300 Sobic004G159000 Sobic004G159000 Sobic005G044300--Sobic004G159000 Sobic001G387200 Sobic001G387200 Sobic005G044300--Sobic001G387200 Sobic004G039400 Sobic004G039400 Sobic005G044300--Sobic004G039400 Sobic002G420600 Sobic002G420600 Sobic005G044300--Sobic002G420600 Sobic004G353500 Sobic004G353500 Sobic005G044300--Sobic004G353500 Sobic003G335300 Sobic003G335300 Sobic005G044300--Sobic003G335300 Sobic003G016300 Sobic003G016300 Sobic005G044300--Sobic003G016300 Sobic001G038000 Sobic001G038000 Sobic005G044300--Sobic001G038000 Sobic009G054000 Sobic009G054000 Sobic004G123000--Sobic009G054000 Sobic006G239300 Sobic006G239300 Sobic004G123000--Sobic006G239300 Sobic001G350600 Sobic001G350600 Sobic004G123000--Sobic001G350600 Sobic003G209000 Sobic003G209000 Sobic004G123000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic004G123000--Sobic002G296200 Sobic006G013000 Sobic006G013000 Sobic004G123000--Sobic006G013000 Sobic003G155400 Sobic003G155400 Sobic004G123000--Sobic003G155400 Sobic004G123000--Sobic004G159000 Sobic001G404800 Sobic001G404800 Sobic004G123000--Sobic001G404800 Sobic003G131300 Sobic003G131300 Sobic010G197900--Sobic003G131300 Sobic001G367000 Sobic001G367000 Sobic010G197900--Sobic001G367000 Sobic002G401700 Sobic002G401700 Sobic010G197900--Sobic002G401700 Sobic006G094600 Sobic006G094600 Sobic010G197900--Sobic006G094600 Sobic008G136800 Sobic008G136800 Sobic010G197900--Sobic008G136800 Sobic003G374000 Sobic003G374000 Sobic010G197900--Sobic003G374000 Sobic004G344800 Sobic004G344800 Sobic010G197900--Sobic004G344800 Sobic010G197900--Sobic009G001900 Sobic010G197900--Sobic004G164000 Sobic003G074900--Sobic008G136800 Sobic003G074900--Sobic006G124300 Sobic003G074900--Sobic006G203900 Sobic003G074900--Sobic002G387800 Sobic009G211900 Sobic009G211900 Sobic003G074900--Sobic009G211900 Sobic003G074900--Sobic003G016300 Sobic001G219800 Sobic001G219800 Sobic003G074900--Sobic001G219800 Sobic007G141100 Sobic007G141100 Sobic003G074900--Sobic007G141100 Sobic003G074900--Sobic009G001900 Sobic001G290766--Sobic010G197900 Sobic001G387800 Sobic001G387800 Sobic001G290766--Sobic001G387800 Sobic005G027300 Sobic005G027300 Sobic001G290766--Sobic005G027300 Sobic001G290766--Sobic005G079500 Sobic002G144275 Sobic002G144275 Sobic001G290766--Sobic002G144275 Sobic008G110500 Sobic008G110500 Sobic001G290766--Sobic008G110500 Sobic004G103600 Sobic004G103600 Sobic001G290766--Sobic004G103600 Sobic001G290766--Sobic001G013200 Sobic001G290766--Sobic003G131300 Sobic006G124300--Sobic009G211900 Sobic006G124300--Sobic006G203900 Sobic006G124300--Sobic008G136800 Sobic004G260200 Sobic004G260200 Sobic006G124300--Sobic004G260200 Sobic005G091700 Sobic005G091700 Sobic006G124300--Sobic005G091700 Sobic001G030300 Sobic001G030300 Sobic006G124300--Sobic001G030300 Sobic003G135600 Sobic003G135600 Sobic006G124300--Sobic003G135600 Sobic006G124300--Sobic003G074900 Sobic006G124300--Sobic001G350600 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700
Octagon: transcription factors


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