Gene annotation
Transcriptome id Sobic.001G290766.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8D6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32370 : tobamovirus multiplication 2B
RAP-DB (Rice) LOC_Os02g17850.1 : TOM2B, putative, expressed
MaizeGDB (Corn) Zm00025a003454
Brachypodium -
Barley HORVU1Hr1G054340.1 , HORVU1Hr1G054340.3 , HORVU1Hr1G054340.2 , HORVU1Hr1G054340.5 , HORVU1Hr1G054340.4 , HORVU1Hr1G054340.7 , HORVU1Hr1G054340.6
Wheat TraesCS1A02G213300 , TraesCS1B02G226700 , TraesCS1D02G216100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G197900 expressed protein -
2 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
3 Sobic.005G027300 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
4 Sobic.005G079500 OsFBX399 - F-box domain containing protein, expressed -
5 Sobic.002G144275 - -
6 Sobic.008G110500 UDP-N-acetylglucosamine transferase subunit ALG13, putative, expressed K07432: beta-1,4-N-acetylglucosaminyltransferase
7 Sobic.004G103600 actin-related protein 2/3 complex subunit 3, putative, expressed K05756: actin related protein 2/3 complex, subunit 3
8 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
9 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
10 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
11 Sobic.001G018200 prohibitin-2, putative, expressed K17081: prohibitin 2
12 Sobic.007G191600 exosome complex exonuclease, putative, expressed K12586: RRP43, EXOSC8, exosome complex component RRP43
13 Sobic.001G323300 ethylene-responsive element-binding protein, putative, expressed -
14 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
15 Sobic.003G118400 expressed protein -
16 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
17 Sobic.003G211700 expressed protein -
18 Sobic.007G206300 ribosomal protein S17, putative, expressed K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
19 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
20 Sobic.005G091700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae


Gene co-expression network
sample Sobic001G290766 Sobic001G290766 Sobic010G197900 Sobic010G197900 Sobic001G290766--Sobic010G197900 Sobic001G387800 Sobic001G387800 Sobic001G290766--Sobic001G387800 Sobic005G027300 Sobic005G027300 Sobic001G290766--Sobic005G027300 Sobic005G079500 Sobic005G079500 Sobic001G290766--Sobic005G079500 Sobic002G144275 Sobic002G144275 Sobic001G290766--Sobic002G144275 Sobic008G110500 Sobic008G110500 Sobic001G290766--Sobic008G110500 Sobic004G103600 Sobic004G103600 Sobic001G290766--Sobic004G103600 Sobic001G013200 Sobic001G013200 Sobic001G290766--Sobic001G013200 Sobic003G131300 Sobic003G131300 Sobic001G290766--Sobic003G131300 Sobic010G197900--Sobic003G131300 Sobic001G367000 Sobic001G367000 Sobic010G197900--Sobic001G367000 Sobic002G401700 Sobic002G401700 Sobic010G197900--Sobic002G401700 Sobic006G094600 Sobic006G094600 Sobic010G197900--Sobic006G094600 Sobic008G136800 Sobic008G136800 Sobic010G197900--Sobic008G136800 Sobic003G374000 Sobic003G374000 Sobic010G197900--Sobic003G374000 Sobic004G344800 Sobic004G344800 Sobic010G197900--Sobic004G344800 Sobic009G001900 Sobic009G001900 Sobic010G197900--Sobic009G001900 Sobic004G164000 Sobic004G164000 Sobic010G197900--Sobic004G164000 Sobic003G196200 Sobic003G196200 Sobic001G387800--Sobic003G196200 Sobic001G178500 Sobic001G178500 Sobic001G387800--Sobic001G178500 Sobic001G008100 Sobic001G008100 Sobic001G387800--Sobic001G008100 Sobic004G039400 Sobic004G039400 Sobic001G387800--Sobic004G039400 Sobic007G119600 Sobic007G119600 Sobic001G387800--Sobic007G119600 Sobic009G191400 Sobic009G191400 Sobic001G387800--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic001G387800--Sobic002G079700 Sobic007G206300 Sobic007G206300 Sobic001G387800--Sobic007G206300 Sobic001G465400 Sobic001G465400 Sobic001G387800--Sobic001G465400 Sobic003G196800 Sobic003G196800 Sobic005G027300--Sobic003G196800 Sobic001G096100 Sobic001G096100 Sobic005G027300--Sobic001G096100 Sobic008G098800 Sobic008G098800 Sobic005G027300--Sobic008G098800 Sobic005G027300--Sobic009G001900 Sobic004G066800 Sobic004G066800 Sobic005G027300--Sobic004G066800 Sobic001G342200 Sobic001G342200 Sobic005G027300--Sobic001G342200 Sobic001G025600 Sobic001G025600 Sobic005G027300--Sobic001G025600 Sobic001G481700 Sobic001G481700 Sobic005G027300--Sobic001G481700 Sobic001G513500 Sobic001G513500 Sobic005G027300--Sobic001G513500 Sobic008G025700 Sobic008G025700 Sobic005G079500--Sobic008G025700 Sobic008G014300 Sobic008G014300 Sobic005G079500--Sobic008G014300 Sobic005G044300 Sobic005G044300 Sobic005G079500--Sobic005G044300 Sobic004G123000 Sobic004G123000 Sobic005G079500--Sobic004G123000 Sobic005G079500--Sobic010G197900 Sobic003G074900 Sobic003G074900 Sobic005G079500--Sobic003G074900 Sobic005G079500--Sobic001G290766 Sobic006G124300 Sobic006G124300 Sobic005G079500--Sobic006G124300 Sobic005G079500--Sobic009G001900 Sobic001G402300 Sobic001G402300 Sobic002G144275--Sobic001G402300 Sobic010G179700 Sobic010G179700 Sobic002G144275--Sobic010G179700 Sobic006G043700 Sobic006G043700 Sobic002G144275--Sobic006G043700 Sobic008G137600 Sobic008G137600 Sobic002G144275--Sobic008G137600 Sobic002G131400 Sobic002G131400 Sobic002G144275--Sobic002G131400 Sobic002G116500 Sobic002G116500 Sobic002G144275--Sobic002G116500 Sobic003G273400 Sobic003G273400 Sobic002G144275--Sobic003G273400 Sobic007G220900 Sobic007G220900 Sobic002G144275--Sobic007G220900 Sobic002G144275--Sobic008G110500 Sobic001G443200 Sobic001G443200 Sobic008G110500--Sobic001G443200 Sobic003G148900 Sobic003G148900 Sobic008G110500--Sobic003G148900 Sobic008G102600 Sobic008G102600 Sobic008G110500--Sobic008G102600 Sobic008G110500--Sobic001G387800 Sobic008G145100 Sobic008G145100 Sobic008G110500--Sobic008G145100 Sobic010G040900 Sobic010G040900 Sobic008G110500--Sobic010G040900 Sobic005G184200 Sobic005G184200 Sobic008G110500--Sobic005G184200 Sobic001G542900 Sobic001G542900 Sobic008G110500--Sobic001G542900 Sobic008G110500--Sobic003G196200 Sobic007G118000 Sobic007G118000 Sobic004G103600--Sobic007G118000 Sobic007G019100 Sobic007G019100 Sobic004G103600--Sobic007G019100 Sobic004G103600--Sobic001G342200 Sobic004G103600--Sobic001G367000 Sobic007G045600 Sobic007G045600 Sobic004G103600--Sobic007G045600 Sobic002G296300 Sobic002G296300 Sobic004G103600--Sobic002G296300 Sobic005G086500 Sobic005G086500 Sobic004G103600--Sobic005G086500 Sobic003G273900 Sobic003G273900 Sobic004G103600--Sobic003G273900 Sobic001G054200 Sobic001G054200 Sobic004G103600--Sobic001G054200 Sobic003G167000 Sobic003G167000 Sobic001G013200--Sobic003G167000 Sobic007G048700 Sobic007G048700 Sobic001G013200--Sobic007G048700 Sobic001G035400 Sobic001G035400 Sobic001G013200--Sobic001G035400 Sobic001G013200--Sobic008G014300 Sobic006G203900 Sobic006G203900 Sobic001G013200--Sobic006G203900 Sobic009G112900 Sobic009G112900 Sobic001G013200--Sobic009G112900 Sobic001G013200--Sobic003G131300 Sobic001G013200--Sobic010G197900 Sobic007G003100 Sobic007G003100 Sobic001G013200--Sobic007G003100 Sobic003G131300--Sobic004G164000 Sobic003G131300--Sobic010G197900 Sobic003G131300--Sobic006G094600 Sobic001G126200 Sobic001G126200 Sobic003G131300--Sobic001G126200 Sobic003G131300--Sobic001G035400 Sobic003G131300--Sobic004G344800 Sobic001G036700 Sobic001G036700 Sobic003G131300--Sobic001G036700 Sobic003G131300--Sobic009G001900 Sobic007G019501 Sobic007G019501 Sobic003G131300--Sobic007G019501
Octagon: transcription factors


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