Gene annotation
Transcriptome id Sobic.001G021500.1
Synonym Sb01g002050, IXR2, PRC1, E112, CESA6
Functional annotation CESA5 - cellulose synthase, expressed
UniProt C5WTX2
Pfam PF13632 PF14569
Panther DB PTHR13301 PTHR13301:SF73
NCBI CDD -
KEGG Orthology K10999; cellulose synthase A
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64740 : cellulose synthase 6
RAP-DB (Rice) LOC_Os07g24190.1 : CESA3 - cellulose synthase, expressed
MaizeGDB (Corn) Zm00025a036849 , Zm00025a008946 , Zm00025a013593 , Zm00025a013618 , Zm00025a045761 , Zm00025a043049 , Zm00025a032075 , Zm00025a045530 , Zm00025a009576 , Zm00025a013935 , Zm00025a047054
Brachypodium PNT64610 , KQK16504 , KQK16503 , KQK16502 , KQK16501 , PNT75245 , PNT75244 , PNT75246 , KQK12260 , KQK12261 , KQK20229
Barley HORVU5Hr1G064230.8 , HORVU5Hr1G064230.9 , HORVU5Hr1G064230.3 , HORVU5Hr1G064230.6 , HORVU5Hr1G064230.7 , HORVU5Hr1G064230.4 , HORVU5Hr1G118270.21 , HORVU5Hr1G118270.20 , HORVU5Hr1G118270.23 , HORVU5Hr1G118270.22 , HORVU5Hr1G118270.25 , HORVU5Hr1G118270.24 , HORVU5Hr1G118270.27 , HORVU5Hr1G118270.26 , HORVU5Hr1G118270.29 , HORVU5Hr1G118270.28 , HORVU5Hr1G064230.18 , HORVU5Hr1G064230.19 , HORVU5Hr1G064230.10 , HORVU5Hr1G064230.11 , HORVU5Hr1G064230.12 , HORVU5Hr1G064230.13 , HORVU5Hr1G064230.15 , HORVU5Hr1G064230.16 , HORVU5Hr1G064230.17 , HORVU5Hr1G064230.21 , HORVU5Hr1G064230.20 , HORVU5Hr1G064230.22 , HORVU5Hr1G118270.30 , HORVU5Hr1G118270.6 , HORVU5Hr1G118270.7 , HORVU5Hr1G118270.4 , HORVU5Hr1G118270.5 , HORVU5Hr1G118270.2 , HORVU5Hr1G118270.3 , HORVU5Hr1G118270.1 , HORVU5Hr1G118270.8 , HORVU5Hr1G118270.9 , HORVU5Hr1G118270.18 , HORVU5Hr1G118270.19 , HORVU5Hr1G118270.14 , HORVU5Hr1G118270.15 , HORVU5Hr1G118270.16 , HORVU5Hr1G118270.17 , HORVU5Hr1G118270.10 , HORVU5Hr1G118270.11 , HORVU5Hr1G118270.12 , HORVU5Hr1G118270.13
Wheat TraesCS5D02G517200 , TraesCS5D02G517200 , TraesCS5D02G517200 , TraesCS1B02G210700 , TraesCS5B02G221600 , TraesCS5B02G221600 , TraesCS5B02G221600 , TraesCS5A02G222500 , TraesCS4A02G355000 , TraesCS5B02G517500 , TraesCS5B02G517500 , TraesCS5B02G517500 , TraesCS4A02G355000 , TraesCS4A02G355000 , TraesCS4A02G355000 , TraesCS5D02G230300
Populus PNT34627 , PNT34626 , PNT06230 , PNT06234 , PNT06233 , PNT06232 , PNT06231


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cDNA sequences
Sobic.001G021500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G243400 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
2 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
4 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
5 Sobic.008G190500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
6 Sobic.003G347300 TBC domain containing protein, expressed -
7 Sobic.010G123300 expressed protein -
8 Sobic.009G144200 glycosyl transferase, putative, expressed -
9 Sobic.007G210900 expressed protein -
10 Sobic.010G120300 tm-1GCR237 protein, putative, expressed -
11 Sobic.002G033700 AIR9 protein, putative, expressed -
12 Sobic.003G098600 expressed protein -
13 Sobic.002G142500 expressed protein -
14 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
15 Sobic.003G400600 BHLH transcription factor, putative, expressed -
16 Sobic.001G036800 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
17 Sobic.001G315400 expressed protein -
18 Sobic.009G226100 expressed protein -
19 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
20 Sobic.001G405000 MRH1, putative, expressed -


Gene co-expression network
sample Sobic001G021500 Sobic001G021500 Sobic004G243400 Sobic004G243400 Sobic001G021500--Sobic004G243400 Sobic002G377300 Sobic002G377300 Sobic001G021500--Sobic002G377300 Sobic009G055900 Sobic009G055900 Sobic001G021500--Sobic009G055900 Sobic003G165800 Sobic003G165800 Sobic001G021500--Sobic003G165800 Sobic008G190500 Sobic008G190500 Sobic001G021500--Sobic008G190500 Sobic003G347300 Sobic003G347300 Sobic001G021500--Sobic003G347300 Sobic010G123300 Sobic010G123300 Sobic001G021500--Sobic010G123300 Sobic009G144200 Sobic009G144200 Sobic001G021500--Sobic009G144200 Sobic007G210900 Sobic007G210900 Sobic001G021500--Sobic007G210900 Sobic004G243400--Sobic001G021500 Sobic004G243400--Sobic009G055900 Sobic004G243400--Sobic009G144200 Sobic001G405000 Sobic001G405000 Sobic004G243400--Sobic001G405000 Sobic003G098600 Sobic003G098600 Sobic004G243400--Sobic003G098600 Sobic002G003200 Sobic002G003200 Sobic004G243400--Sobic002G003200 Sobic003G176200 Sobic003G176200 Sobic004G243400--Sobic003G176200 Sobic004G044100 Sobic004G044100 Sobic004G243400--Sobic004G044100 Sobic008G008500 Sobic008G008500 Sobic004G243400--Sobic008G008500 Sobic002G377300--Sobic009G055900 Sobic001G371700 Sobic001G371700 Sobic002G377300--Sobic001G371700 Sobic010G165100 Sobic010G165100 Sobic002G377300--Sobic010G165100 Sobic002G142500 Sobic002G142500 Sobic002G377300--Sobic002G142500 Sobic009G231100 Sobic009G231100 Sobic002G377300--Sobic009G231100 Sobic001G047200 Sobic001G047200 Sobic002G377300--Sobic001G047200 Sobic008G143600 Sobic008G143600 Sobic002G377300--Sobic008G143600 Sobic002G225000 Sobic002G225000 Sobic002G377300--Sobic002G225000 Sobic002G246000 Sobic002G246000 Sobic002G377300--Sobic002G246000 Sobic009G055900--Sobic008G143600 Sobic009G055900--Sobic002G377300 Sobic009G055900--Sobic001G405000 Sobic004G109000 Sobic004G109000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic001G104300 Sobic001G104300 Sobic003G165800--Sobic001G104300 Sobic002G141900 Sobic002G141900 Sobic003G165800--Sobic002G141900 Sobic003G420900 Sobic003G420900 Sobic003G165800--Sobic003G420900 Sobic003G165800--Sobic001G021500 Sobic001G441200 Sobic001G441200 Sobic003G165800--Sobic001G441200 Sobic006G281066 Sobic006G281066 Sobic003G165800--Sobic006G281066 Sobic005G022000 Sobic005G022000 Sobic003G165800--Sobic005G022000 Sobic003G165800--Sobic009G055900 Sobic002G363500 Sobic002G363500 Sobic003G165800--Sobic002G363500 Sobic008G190500--Sobic007G210900 Sobic008G086200 Sobic008G086200 Sobic008G190500--Sobic008G086200 Sobic010G135300 Sobic010G135300 Sobic008G190500--Sobic010G135300 Sobic003G077500 Sobic003G077500 Sobic008G190500--Sobic003G077500 Sobic008G190500--Sobic001G021500 Sobic003G023400 Sobic003G023400 Sobic008G190500--Sobic003G023400 Sobic009G123500 Sobic009G123500 Sobic008G190500--Sobic009G123500 Sobic003G420800 Sobic003G420800 Sobic008G190500--Sobic003G420800 Sobic001G315400 Sobic001G315400 Sobic008G190500--Sobic001G315400 Sobic002G218700 Sobic002G218700 Sobic003G347300--Sobic002G218700 Sobic003G347300--Sobic001G021500 Sobic002G033700 Sobic002G033700 Sobic003G347300--Sobic002G033700 Sobic009G126000 Sobic009G126000 Sobic003G347300--Sobic009G126000 Sobic006G254500 Sobic006G254500 Sobic003G347300--Sobic006G254500 Sobic009G030300 Sobic009G030300 Sobic003G347300--Sobic009G030300 Sobic009G013700 Sobic009G013700 Sobic003G347300--Sobic009G013700 Sobic003G347300--Sobic009G123500 Sobic003G347300--Sobic008G086200 Sobic010G123300--Sobic001G021500 Sobic010G123300--Sobic003G165800 Sobic010G059200 Sobic010G059200 Sobic010G123300--Sobic010G059200 Sobic010G123300--Sobic009G055900 Sobic002G118700 Sobic002G118700 Sobic010G123300--Sobic002G118700 Sobic004G203900 Sobic004G203900 Sobic010G123300--Sobic004G203900 Sobic007G050600 Sobic007G050600 Sobic010G123300--Sobic007G050600 Sobic010G050900 Sobic010G050900 Sobic010G123300--Sobic010G050900 Sobic004G296800 Sobic004G296800 Sobic010G123300--Sobic004G296800 Sobic009G144200--Sobic004G243400 Sobic007G001900 Sobic007G001900 Sobic009G144200--Sobic007G001900 Sobic008G064601 Sobic008G064601 Sobic009G144200--Sobic008G064601 Sobic009G144200--Sobic009G055900 Sobic009G144200--Sobic001G021500 Sobic003G134900 Sobic003G134900 Sobic009G144200--Sobic003G134900 Sobic009G144200--Sobic008G190500 Sobic004G168700 Sobic004G168700 Sobic009G144200--Sobic004G168700 Sobic010G126100 Sobic010G126100 Sobic009G144200--Sobic010G126100 Sobic007G210900--Sobic003G420800 Sobic004G154600 Sobic004G154600 Sobic007G210900--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic007G210900--Sobic004G199700 Sobic002G002100 Sobic002G002100 Sobic007G210900--Sobic002G002100 Sobic002G348700 Sobic002G348700 Sobic007G210900--Sobic002G348700 Sobic004G205500 Sobic004G205500 Sobic007G210900--Sobic004G205500 Sobic006G167300 Sobic006G167300 Sobic007G210900--Sobic006G167300 Sobic007G210900--Sobic008G190500 Sobic002G179700 Sobic002G179700 Sobic007G210900--Sobic002G179700
Octagon: transcription factors


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