Gene annotation
Transcriptome id Sobic.001G036800.1
Synonym RAP2.7, Sb01g003400, TOE1
Functional annotation AP2 domain containing protein, expressed
UniProt C5WV31
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF30
NCBI CDD -
KEGG Orthology K09284; AP2-like factor, euAP2 lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT2G28550 : related to AP2.7
RAP-DB (Rice) LOC_Os03g60430.2 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008787
Brachypodium KQK12460 , KQK12459 , KQK20298 , KQK20299 , KQK20296 , KQK20297
Barley HORVU5Hr1G112440.20 , HORVU5Hr1G112440.21 , HORVU5Hr1G112440.3 , HORVU5Hr1G112440.1 , HORVU5Hr1G112440.7 , HORVU5Hr1G112440.6 , HORVU5Hr1G112440.5 , HORVU5Hr1G112440.8 , HORVU5Hr1G112440.13 , HORVU5Hr1G112440.12 , HORVU5Hr1G112440.10 , HORVU5Hr1G112440.17 , HORVU5Hr1G112440.16 , HORVU5Hr1G112440.15 , HORVU5Hr1G112440.14 , HORVU5Hr1G112440.19 , HORVU5Hr1G112440.18
Wheat TraesCS5A02G473800 , TraesCS5A02G473800 , TraesCS5A02G473800 , TraesCS5D02G486600 , TraesCS5D02G486600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G532700 WD repeat-containing protein 44, putative, expressed -
2 Sobic.004G128200 Probable LRR receptor-like serine/threonine-protein kinase At5g10290(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
3 Sobic.007G000400 B3 DNA binding domain containing protein, expressed -
4 Sobic.002G427300 protein phosphotase protein, putative, expressed -
5 Sobic.009G096100 endoribonuclease Dicer, putative, expressed -
6 Sobic.007G180450 - K01213: galacturan 1,4-alpha-galacturonidase
7 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.001G267900 - -
9 Sobic.004G178400 zinc finger, C3HC4 type domain containing protein, expressed K19039: E3 ubiquitin-protein ligase ATL7/58/59
10 Sobic.003G163100 expressed protein K08819: cyclin-dependent kinase 12/13
11 Sobic.007G208900 resistance protein LR10, putative, expressed -
12 Sobic.002G141900 -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed -
13 Sobic.003G267000 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
14 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
15 Sobic.010G157700 expressed protein -
16 Sobic.009G112400 OsFBX361 - F-box domain containing protein, expressed -
17 Sobic.008G068601 - -
18 Sobic.008G136200 spotted leaf 11, putative, expressed -
19 Sobic.008G125100 Mur ligase family protein, putative, expressed -
20 Sobic.001G518400 EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic001G036800 Sobic001G036800 Sobic001G532700 Sobic001G532700 Sobic001G036800--Sobic001G532700 Sobic004G128200 Sobic004G128200 Sobic001G036800--Sobic004G128200 Sobic007G000400 Sobic007G000400 Sobic001G036800--Sobic007G000400 Sobic002G427300 Sobic002G427300 Sobic001G036800--Sobic002G427300 Sobic009G096100 Sobic009G096100 Sobic001G036800--Sobic009G096100 Sobic007G180450 Sobic007G180450 Sobic001G036800--Sobic007G180450 Sobic004G325400 Sobic004G325400 Sobic001G036800--Sobic004G325400 Sobic001G267900 Sobic001G267900 Sobic001G036800--Sobic001G267900 Sobic004G178400 Sobic004G178400 Sobic001G036800--Sobic004G178400 Sobic005G084100 Sobic005G084100 Sobic001G532700--Sobic005G084100 Sobic006G059200 Sobic006G059200 Sobic001G532700--Sobic006G059200 Sobic008G136200 Sobic008G136200 Sobic001G532700--Sobic008G136200 Sobic001G253200 Sobic001G253200 Sobic001G532700--Sobic001G253200 Sobic001G532700--Sobic001G036800 Sobic001G360900 Sobic001G360900 Sobic001G532700--Sobic001G360900 Sobic009G112400 Sobic009G112400 Sobic001G532700--Sobic009G112400 Sobic003G052600 Sobic003G052600 Sobic001G532700--Sobic003G052600 Sobic007G054400 Sobic007G054400 Sobic001G532700--Sobic007G054400 Sobic005G199200 Sobic005G199200 Sobic004G128200--Sobic005G199200 Sobic001G367100 Sobic001G367100 Sobic004G128200--Sobic001G367100 Sobic010G279900 Sobic010G279900 Sobic004G128200--Sobic010G279900 Sobic001G315400 Sobic001G315400 Sobic004G128200--Sobic001G315400 Sobic003G409200 Sobic003G409200 Sobic004G128200--Sobic003G409200 Sobic001G090300 Sobic001G090300 Sobic004G128200--Sobic001G090300 Sobic002G145800 Sobic002G145800 Sobic004G128200--Sobic002G145800 Sobic007G183300 Sobic007G183300 Sobic004G128200--Sobic007G183300 Sobic008G017100 Sobic008G017100 Sobic004G128200--Sobic008G017100 Sobic008G056900 Sobic008G056900 Sobic007G000400--Sobic008G056900 Sobic001G522400 Sobic001G522400 Sobic007G000400--Sobic001G522400 Sobic006G242401 Sobic006G242401 Sobic007G000400--Sobic006G242401 Sobic001G045700 Sobic001G045700 Sobic007G000400--Sobic001G045700 Sobic007G000400--Sobic009G096100 Sobic002G380100 Sobic002G380100 Sobic007G000400--Sobic002G380100 Sobic007G000400--Sobic004G128200 Sobic003G163100 Sobic003G163100 Sobic007G000400--Sobic003G163100 Sobic010G143200 Sobic010G143200 Sobic007G000400--Sobic010G143200 Sobic006G208400 Sobic006G208400 Sobic002G427300--Sobic006G208400 Sobic001G119800 Sobic001G119800 Sobic002G427300--Sobic001G119800 Sobic006G281000 Sobic006G281000 Sobic002G427300--Sobic006G281000 Sobic006G140600 Sobic006G140600 Sobic002G427300--Sobic006G140600 Sobic010G085200 Sobic010G085200 Sobic002G427300--Sobic010G085200 Sobic004G006700 Sobic004G006700 Sobic002G427300--Sobic004G006700 Sobic003G314700 Sobic003G314700 Sobic002G427300--Sobic003G314700 Sobic001G460500 Sobic001G460500 Sobic002G427300--Sobic001G460500 Sobic002G427300--Sobic001G036800 Sobic009G096100--Sobic008G056900 Sobic002G192500 Sobic002G192500 Sobic009G096100--Sobic002G192500 Sobic010G157700 Sobic010G157700 Sobic009G096100--Sobic010G157700 Sobic001G485600 Sobic001G485600 Sobic009G096100--Sobic001G485600 Sobic006G056000 Sobic006G056000 Sobic009G096100--Sobic006G056000 Sobic007G043900 Sobic007G043900 Sobic009G096100--Sobic007G043900 Sobic002G344500 Sobic002G344500 Sobic009G096100--Sobic002G344500 Sobic009G096100--Sobic002G380100 Sobic007G077700 Sobic007G077700 Sobic009G096100--Sobic007G077700 Sobic006G179000 Sobic006G179000 Sobic007G180450--Sobic006G179000 Sobic001G043400 Sobic001G043400 Sobic007G180450--Sobic001G043400 Sobic007G180450--Sobic001G036800 Sobic004G232000 Sobic004G232000 Sobic007G180450--Sobic004G232000 Sobic001G087100 Sobic001G087100 Sobic007G180450--Sobic001G087100 Sobic004G018100 Sobic004G018100 Sobic007G180450--Sobic004G018100 Sobic007G180450--Sobic004G325400 Sobic001G543700 Sobic001G543700 Sobic007G180450--Sobic001G543700 Sobic001G114400 Sobic001G114400 Sobic007G180450--Sobic001G114400 Sobic009G257800 Sobic009G257800 Sobic004G325400--Sobic009G257800 Sobic007G027700 Sobic007G027700 Sobic004G325400--Sobic007G027700 Sobic007G009400 Sobic007G009400 Sobic004G325400--Sobic007G009400 Sobic003G401100 Sobic003G401100 Sobic004G325400--Sobic003G401100 Sobic001G143500 Sobic001G143500 Sobic004G325400--Sobic001G143500 Sobic004G021200 Sobic004G021200 Sobic004G325400--Sobic004G021200 Sobic003G401000 Sobic003G401000 Sobic004G325400--Sobic003G401000 Sobic004G072100 Sobic004G072100 Sobic004G325400--Sobic004G072100 Sobic008G127400 Sobic008G127400 Sobic004G325400--Sobic008G127400 Sobic010G056000 Sobic010G056000 Sobic001G267900--Sobic010G056000 Sobic006G165000 Sobic006G165000 Sobic001G267900--Sobic006G165000 Sobic003G084900 Sobic003G084900 Sobic001G267900--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic001G267900--Sobic010G028800 Sobic001G518400 Sobic001G518400 Sobic001G267900--Sobic001G518400 Sobic003G241200 Sobic003G241200 Sobic001G267900--Sobic003G241200 Sobic001G094000 Sobic001G094000 Sobic001G267900--Sobic001G094000 Sobic006G222300 Sobic006G222300 Sobic001G267900--Sobic006G222300 Sobic001G362200 Sobic001G362200 Sobic001G267900--Sobic001G362200 Sobic004G178400--Sobic006G140600 Sobic004G178400--Sobic004G128200 Sobic008G125100 Sobic008G125100 Sobic004G178400--Sobic008G125100 Sobic003G077500 Sobic003G077500 Sobic004G178400--Sobic003G077500 Sobic008G088842 Sobic008G088842 Sobic004G178400--Sobic008G088842 Sobic002G143200 Sobic002G143200 Sobic004G178400--Sobic002G143200 Sobic003G023400 Sobic003G023400 Sobic004G178400--Sobic003G023400 Sobic004G178400--Sobic001G253200 Sobic008G190500 Sobic008G190500 Sobic004G178400--Sobic008G190500
Octagon: transcription factors


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