Gene annotation
Transcriptome id Sobic.010G092600.1
Synonym NIP4, NLM5, Sb10g008090, 2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
aquaporin protein, putative, expressed
UniProt A9XHW6
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF142
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09874; aquaporin NIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G37820 : NOD26-like intrinsic protein 4;2
RAP-DB (Rice) LOC_Os06g12310.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a042597 , Zm00025a033207 , Zm00025a022031 , Zm00025a049470
Brachypodium KQK18873 , KQK18872 , KQK01944
Barley HORVU7Hr1G038270.1 , HORVU7Hr1G038270.3 , HORVU7Hr1G038270.2 , HORVU6Hr1G075850.13 , HORVU6Hr1G075850.12 , HORVU6Hr1G075850.11 , HORVU6Hr1G075850.10 , HORVU6Hr1G075850.9 , HORVU6Hr1G075850.8 , HORVU6Hr1G075850.6 , HORVU6Hr1G075850.5 , HORVU6Hr1G075850.4 , HORVU6Hr1G075850.3 , HORVU6Hr1G075850.2 , HORVU6Hr1G075850.1 , HORVU7Hr1G038220.10 , HORVU7Hr1G038220.11 , HORVU7Hr1G038220.12 , HORVU7Hr1G038220.6 , HORVU7Hr1G038220.7 , HORVU7Hr1G038220.4 , HORVU7Hr1G038220.5 , HORVU7Hr1G038220.2 , HORVU7Hr1G038220.3 , HORVU7Hr1G038220.1 , HORVU7Hr1G038220.8 , HORVU7Hr1G038220.9
Wheat TraesCS6D02G286400 , TraesCS7D02G188800 , TraesCS7D02G188800 , TraesCS6A02G307300 , TraesCS7A02G187800 , TraesCS7B02G092900 , TraesCS6B02G335900
Populus -


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cDNA sequences
Sobic.010G092600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
2 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
3 Sobic.003G078501 - -
4 Sobic.001G045600 remorin, putative, expressed -
5 Sobic.004G331300 AP2 domain containing protein, expressed -
6 Sobic.007G217300 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
7 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
8 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
9 Sobic.004G155150 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.001G159850 - -
19 Sobic.001G159850 - -
20 Sobic.001G159850 - -


Gene co-expression network
sample Sobic010G092600 Sobic010G092600 Sobic001G125100 Sobic001G125100 Sobic010G092600--Sobic001G125100 Sobic010G006700 Sobic010G006700 Sobic010G092600--Sobic010G006700 Sobic003G078501 Sobic003G078501 Sobic010G092600--Sobic003G078501 Sobic001G045600 Sobic001G045600 Sobic010G092600--Sobic001G045600 Sobic004G331300 Sobic004G331300 Sobic010G092600--Sobic004G331300 Sobic007G217300 Sobic007G217300 Sobic010G092600--Sobic007G217300 Sobic006G220200 Sobic006G220200 Sobic010G092600--Sobic006G220200 Sobic009G000700 Sobic009G000700 Sobic010G092600--Sobic009G000700 Sobic004G155150 Sobic004G155150 Sobic010G092600--Sobic004G155150 Sobic001G125100--Sobic003G078501 Sobic001G125100--Sobic010G006700 Sobic003G373150 Sobic003G373150 Sobic001G125100--Sobic003G373150 Sobic001G159850 Sobic001G159850 Sobic001G125100--Sobic001G159850 Sobic010G006700--Sobic004G331300 Sobic010G006700--Sobic003G078501 Sobic010G006700--Sobic009G000700 Sobic010G006700--Sobic001G159850 Sobic004G310600 Sobic004G310600 Sobic003G078501--Sobic004G310600 Sobic003G078501--Sobic009G000700 Sobic003G078501--Sobic010G006700 Sobic003G078501--Sobic001G125100 Sobic003G078501--Sobic001G159850 Sobic001G045600--Sobic010G092600 Sobic003G198150 Sobic003G198150 Sobic001G045600--Sobic003G198150 Sobic002G189000 Sobic002G189000 Sobic001G045600--Sobic002G189000 Sobic001G110900 Sobic001G110900 Sobic001G045600--Sobic001G110900 Sobic010G260300 Sobic010G260300 Sobic001G045600--Sobic010G260300 Sobic006G220300 Sobic006G220300 Sobic001G045600--Sobic006G220300 Sobic002G271100 Sobic002G271100 Sobic001G045600--Sobic002G271100 Sobic003G066900 Sobic003G066900 Sobic001G045600--Sobic003G066900 Sobic002G359000 Sobic002G359000 Sobic001G045600--Sobic002G359000 Sobic004G331300--Sobic001G159850 Sobic007G217300--Sobic001G125100 Sobic007G217300--Sobic003G078501 Sobic007G217300--Sobic010G006700 Sobic007G217300--Sobic001G159850 Sobic006G220200--Sobic006G220300 Sobic006G220200--Sobic010G092600 Sobic001G391300 Sobic001G391300 Sobic006G220200--Sobic001G391300 Sobic002G148700 Sobic002G148700 Sobic006G220200--Sobic002G148700 Sobic002G216400 Sobic002G216400 Sobic006G220200--Sobic002G216400 Sobic001G496300 Sobic001G496300 Sobic006G220200--Sobic001G496300 Sobic003G238000 Sobic003G238000 Sobic006G220200--Sobic003G238000 Sobic006G220200--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220200--Sobic009G155700 Sobic009G000700--Sobic004G310600 Sobic009G000700--Sobic003G078501 Sobic009G000700--Sobic004G155150 Sobic009G000700--Sobic010G006700 Sobic009G000700--Sobic004G331300 Sobic003G233900 Sobic003G233900 Sobic009G000700--Sobic003G233900 Sobic009G000700--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic009G000700--Sobic006G267900 Sobic009G000700--Sobic001G125100 Sobic004G155150--Sobic009G000700 Sobic004G155150--Sobic004G310600 Sobic004G155150--Sobic003G078501 Sobic004G155150--Sobic003G233900 Sobic004G155150--Sobic006G267900 Sobic004G155150--Sobic010G006700 Sobic004G257350 Sobic004G257350 Sobic004G155150--Sobic004G257350 Sobic004G155150--Sobic003G373150 Sobic004G155150--Sobic001G125100
Octagon: transcription factors


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