Gene annotation
Transcriptome id Sobic.007G217300.1
Synonym HSP21
Functional annotation hsp20/alpha crystallin family protein, putative, expressed
UniProt A0A1B6PJ42
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF137
NCBI CDD KOG0710; Molecular chaperone (small heat-shock protein Hsp26/Hsp42)
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27670 : heat shock protein 21
RAP-DB (Rice) LOC_Os05g23140.1 : retrotransposon protein, putative, LINE subclass, expressed
MaizeGDB (Corn) Zm00025a019560 , Zm00025a005006
Brachypodium -
Barley -
Wheat TraesCS5B02G257000 , TraesCS5A02G257700 , TraesCS5D02G266000
Populus -


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cDNA sequences
Sobic.007G217300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
2 Sobic.003G078501 - -
3 Sobic.010G006700 auxin-induced protein 5NG4, putative, expressed -
4 Sobic.001G159850 - -
5 Sobic.001G159850 - -
6 Sobic.001G159850 - -
7 Sobic.001G159850 - -
8 Sobic.001G159850 - -
9 Sobic.001G159850 - -
10 Sobic.001G159850 - -
11 Sobic.001G159850 - -
12 Sobic.001G159850 - -
13 Sobic.001G159850 - -
14 Sobic.001G159850 - -
15 Sobic.001G159850 - -
16 Sobic.001G159850 - -
17 Sobic.001G159850 - -
18 Sobic.003G367350 - -
19 Sobic.004G331300 AP2 domain containing protein, expressed -
20 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic007G217300 Sobic007G217300 Sobic001G125100 Sobic001G125100 Sobic007G217300--Sobic001G125100 Sobic003G078501 Sobic003G078501 Sobic007G217300--Sobic003G078501 Sobic010G006700 Sobic010G006700 Sobic007G217300--Sobic010G006700 Sobic001G159850 Sobic001G159850 Sobic007G217300--Sobic001G159850 Sobic001G125100--Sobic003G078501 Sobic001G125100--Sobic010G006700 Sobic003G373150 Sobic003G373150 Sobic001G125100--Sobic003G373150 Sobic001G125100--Sobic001G159850 Sobic004G310600 Sobic004G310600 Sobic003G078501--Sobic004G310600 Sobic009G000700 Sobic009G000700 Sobic003G078501--Sobic009G000700 Sobic003G078501--Sobic010G006700 Sobic003G078501--Sobic001G125100 Sobic003G078501--Sobic001G159850 Sobic004G331300 Sobic004G331300 Sobic010G006700--Sobic004G331300 Sobic010G006700--Sobic003G078501 Sobic010G006700--Sobic009G000700 Sobic010G006700--Sobic001G159850 Sobic001G159850--Sobic001G159850
Octagon: transcription factors


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