Gene annotation
Transcriptome id Sobic.002G086800.2,Sobic.002G086800.4,Sobic.002G086800.3
Synonym
Functional annotation expressed protein
UniProt A0A1B6QA11
Pfam -
Panther DB PTHR35290 PTHR35290:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G16385 : -
RAP-DB (Rice) LOC_Os11g21804.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G470900 sulfate transporter, putative, expressed K17469: sulfate transporter 2, low-affinity
2 Sobic.001G391300 "Expressed in drought, cold and heat"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
3 Sobic.001G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
4 Sobic.004G332100 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.003G395900 transmembrane amino acid transporter protein, putative, expressed -
6 Sobic.006G220300 - -
7 Sobic.008G171000 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
8 Sobic.003G389700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
10 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.001G496300 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
12 Sobic.004G097300 phosphoethanolamine/phosphocholine phosphatase, putative, expressed K13248: pyridoxal phosphate phosphatase PHOSPHO2
13 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
14 Sobic.009G155700 - -
15 Sobic.003G263001 - -
16 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.005G110502 - -
18 Sobic.004G276200 peptide transporter PTR2, putative, expressed -
19 Sobic.003G410100 protein kinase domain containing protein, expressed K08819: cyclin-dependent kinase 12/13
20 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran


Gene co-expression network
sample Sobic002G086800 Sobic002G086800 Sobic001G470900 Sobic001G470900 Sobic002G086800--Sobic001G470900 Sobic001G391300 Sobic001G391300 Sobic002G086800--Sobic001G391300 Sobic001G087700 Sobic001G087700 Sobic002G086800--Sobic001G087700 Sobic004G332100 Sobic004G332100 Sobic002G086800--Sobic004G332100 Sobic003G395900 Sobic003G395900 Sobic002G086800--Sobic003G395900 Sobic006G220300 Sobic006G220300 Sobic002G086800--Sobic006G220300 Sobic008G171000 Sobic008G171000 Sobic002G086800--Sobic008G171000 Sobic003G389700 Sobic003G389700 Sobic002G086800--Sobic003G389700 Sobic006G220200 Sobic006G220200 Sobic002G086800--Sobic006G220200 Sobic001G470900--Sobic001G087700 Sobic001G470900--Sobic002G086800 Sobic001G496300 Sobic001G496300 Sobic001G470900--Sobic001G496300 Sobic001G470900--Sobic006G220300 Sobic001G110900 Sobic001G110900 Sobic001G470900--Sobic001G110900 Sobic004G058700 Sobic004G058700 Sobic001G470900--Sobic004G058700 Sobic001G470900--Sobic003G389700 Sobic001G498000 Sobic001G498000 Sobic001G470900--Sobic001G498000 Sobic001G470900--Sobic004G332100 Sobic004G097300 Sobic004G097300 Sobic001G391300--Sobic004G097300 Sobic004G276200 Sobic004G276200 Sobic001G391300--Sobic004G276200 Sobic001G391300--Sobic002G086800 Sobic001G391300--Sobic006G220200 Sobic001G391300--Sobic004G332100 Sobic003G339700 Sobic003G339700 Sobic001G391300--Sobic003G339700 Sobic001G391300--Sobic001G087700 Sobic001G391300--Sobic001G470900 Sobic009G183101 Sobic009G183101 Sobic001G391300--Sobic009G183101 Sobic001G087700--Sobic001G470900 Sobic001G087700--Sobic002G086800 Sobic001G087700--Sobic001G110900 Sobic001G087700--Sobic001G391300 Sobic001G087700--Sobic006G220300 Sobic007G160200 Sobic007G160200 Sobic001G087700--Sobic007G160200 Sobic001G087700--Sobic003G389700 Sobic010G092600 Sobic010G092600 Sobic001G087700--Sobic010G092600 Sobic001G087700--Sobic004G332100 Sobic004G332100--Sobic001G391300 Sobic004G332100--Sobic007G160200 Sobic004G332100--Sobic006G220300 Sobic004G332100--Sobic003G339700 Sobic004G332100--Sobic001G110900 Sobic004G332100--Sobic002G086800 Sobic009G069300 Sobic009G069300 Sobic004G332100--Sobic009G069300 Sobic004G332100--Sobic001G470900 Sobic004G332100--Sobic001G087700 Sobic003G395900--Sobic003G389700 Sobic004G255600 Sobic004G255600 Sobic003G395900--Sobic004G255600 Sobic006G008700 Sobic006G008700 Sobic003G395900--Sobic006G008700 Sobic009G140800 Sobic009G140800 Sobic003G395900--Sobic009G140800 Sobic006G130300 Sobic006G130300 Sobic003G395900--Sobic006G130300 Sobic001G111700 Sobic001G111700 Sobic003G395900--Sobic001G111700 Sobic004G283100 Sobic004G283100 Sobic003G395900--Sobic004G283100 Sobic003G395900--Sobic002G086800 Sobic001G329400 Sobic001G329400 Sobic003G395900--Sobic001G329400 Sobic006G220300--Sobic006G220200 Sobic006G220300--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220300--Sobic009G155700 Sobic002G216400 Sobic002G216400 Sobic006G220300--Sobic002G216400 Sobic006G220300--Sobic001G087700 Sobic006G220300--Sobic004G332100 Sobic006G220300--Sobic001G470900 Sobic001G045600 Sobic001G045600 Sobic006G220300--Sobic001G045600 Sobic010G260300 Sobic010G260300 Sobic006G220300--Sobic010G260300 Sobic008G171000--Sobic004G276200 Sobic008G171000--Sobic002G086800 Sobic008G171000--Sobic001G391300 Sobic008G171000--Sobic006G220300 Sobic002G321300 Sobic002G321300 Sobic008G171000--Sobic002G321300 Sobic007G213100 Sobic007G213100 Sobic008G171000--Sobic007G213100 Sobic008G171000--Sobic004G332100 Sobic008G171000--Sobic009G155700 Sobic003G298600 Sobic003G298600 Sobic008G171000--Sobic003G298600 Sobic008G149000 Sobic008G149000 Sobic003G389700--Sobic008G149000 Sobic003G389700--Sobic003G395900 Sobic005G110502 Sobic005G110502 Sobic003G389700--Sobic005G110502 Sobic003G235500 Sobic003G235500 Sobic003G389700--Sobic003G235500 Sobic003G389700--Sobic001G470900 Sobic004G219400 Sobic004G219400 Sobic003G389700--Sobic004G219400 Sobic002G394400 Sobic002G394400 Sobic003G389700--Sobic002G394400 Sobic009G222200 Sobic009G222200 Sobic003G389700--Sobic009G222200 Sobic003G389700--Sobic001G111700 Sobic006G220200--Sobic006G220300 Sobic006G220200--Sobic010G092600 Sobic006G220200--Sobic001G391300 Sobic002G148700 Sobic002G148700 Sobic006G220200--Sobic002G148700 Sobic006G220200--Sobic002G216400 Sobic006G220200--Sobic001G496300 Sobic003G238000 Sobic003G238000 Sobic006G220200--Sobic003G238000 Sobic006G220200--Sobic001G110900 Sobic006G220200--Sobic009G155700
Octagon: transcription factors


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