Gene annotation
Transcriptome id Sobic.003G389700.1
Synonym Sb03g042740
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XFD8
Pfam PF07939
Panther DB PTHR31865 PTHR31865:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31560 : Protein of unknown function (DUF1685)
RAP-DB (Rice) LOC_Os11g17930.1 : expressed protein
MaizeGDB (Corn) Zm00025a039446 , Zm00025a026420
Brachypodium KQK11025
Barley HORVU3Hr1G089380.5 , HORVU3Hr1G089380.4 , HORVU3Hr1G089380.1 , HORVU3Hr1G089380.2 , HORVU4Hr1G014270.1 , HORVU4Hr1G014270.2 , HORVU4Hr1G014270.3 , HORVU3Hr1G089370.4 , HORVU3Hr1G089370.5 , HORVU3Hr1G089370.1 , HORVU3Hr1G089370.2 , HORVU3Hr1G089370.3
Wheat TraesCS3D02G390800 , TraesCS3D02G390600 , TraesCS3B02G429000 , TraesCS3D02G390700 , TraesCS4A02G233600 , TraesCS3D02G390900 , TraesCS4B02G082100 , TraesCS3A02G396900 , TraesCS3A02G396900 , TraesCS3A02G397000 , TraesCS3B02G428700 , TraesCS4D02G080600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G149000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
2 Sobic.003G395900 transmembrane amino acid transporter protein, putative, expressed -
3 Sobic.005G110502 - -
4 Sobic.003G235500 expressed protein -
5 Sobic.001G470900 sulfate transporter, putative, expressed K17469: sulfate transporter 2, low-affinity
6 Sobic.004G219400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
7 Sobic.002G394400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
9 Sobic.001G111700 alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
11 Sobic.006G160400 peroxisomal biogenesis factor 11, putative, expressed -
12 Sobic.009G249600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcriptional regulator, putative, expressed K07735: putative transcriptional regulator
13 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
14 Sobic.009G140800 DUF647 domain containing protein, putative, expressed -
15 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
16 Sobic.001G153200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G343500 OsCttP2 - Putative C-terminal processing peptidase homologue, expressed -
18 Sobic.002G086800 expressed protein -
19 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
20 Sobic.007G126400 CPuORF27 - conserved peptide uORF-containing transcript, expressed K09338: homeobox-leucine zipper protein


Gene co-expression network
sample Sobic003G389700 Sobic003G389700 Sobic008G149000 Sobic008G149000 Sobic003G389700--Sobic008G149000 Sobic003G395900 Sobic003G395900 Sobic003G389700--Sobic003G395900 Sobic005G110502 Sobic005G110502 Sobic003G389700--Sobic005G110502 Sobic003G235500 Sobic003G235500 Sobic003G389700--Sobic003G235500 Sobic001G470900 Sobic001G470900 Sobic003G389700--Sobic001G470900 Sobic004G219400 Sobic004G219400 Sobic003G389700--Sobic004G219400 Sobic002G394400 Sobic002G394400 Sobic003G389700--Sobic002G394400 Sobic009G222200 Sobic009G222200 Sobic003G389700--Sobic009G222200 Sobic001G111700 Sobic001G111700 Sobic003G389700--Sobic001G111700 Sobic007G142200 Sobic007G142200 Sobic008G149000--Sobic007G142200 Sobic008G149000--Sobic003G389700 Sobic001G446100 Sobic001G446100 Sobic008G149000--Sobic001G446100 Sobic001G134100 Sobic001G134100 Sobic008G149000--Sobic001G134100 Sobic006G244000 Sobic006G244000 Sobic008G149000--Sobic006G244000 Sobic001G329400 Sobic001G329400 Sobic008G149000--Sobic001G329400 Sobic009G048900 Sobic009G048900 Sobic008G149000--Sobic009G048900 Sobic005G231500 Sobic005G231500 Sobic008G149000--Sobic005G231500 Sobic004G255600 Sobic004G255600 Sobic008G149000--Sobic004G255600 Sobic003G395900--Sobic003G389700 Sobic003G395900--Sobic004G255600 Sobic006G008700 Sobic006G008700 Sobic003G395900--Sobic006G008700 Sobic009G140800 Sobic009G140800 Sobic003G395900--Sobic009G140800 Sobic006G130300 Sobic006G130300 Sobic003G395900--Sobic006G130300 Sobic003G395900--Sobic001G111700 Sobic004G283100 Sobic004G283100 Sobic003G395900--Sobic004G283100 Sobic002G086800 Sobic002G086800 Sobic003G395900--Sobic002G086800 Sobic003G395900--Sobic001G329400 Sobic005G110502--Sobic001G329400 Sobic005G110502--Sobic009G140800 Sobic005G110502--Sobic004G283100 Sobic006G160400 Sobic006G160400 Sobic005G110502--Sobic006G160400 Sobic004G125700 Sobic004G125700 Sobic005G110502--Sobic004G125700 Sobic004G238600 Sobic004G238600 Sobic005G110502--Sobic004G238600 Sobic002G098800 Sobic002G098800 Sobic005G110502--Sobic002G098800 Sobic008G115900 Sobic008G115900 Sobic005G110502--Sobic008G115900 Sobic008G104601 Sobic008G104601 Sobic005G110502--Sobic008G104601 Sobic010G030800 Sobic010G030800 Sobic003G235500--Sobic010G030800 Sobic003G231800 Sobic003G231800 Sobic003G235500--Sobic003G231800 Sobic007G189700 Sobic007G189700 Sobic003G235500--Sobic007G189700 Sobic010G183100 Sobic010G183100 Sobic003G235500--Sobic010G183100 Sobic003G036100 Sobic003G036100 Sobic003G235500--Sobic003G036100 Sobic009G254600 Sobic009G254600 Sobic003G235500--Sobic009G254600 Sobic001G189100 Sobic001G189100 Sobic003G235500--Sobic001G189100 Sobic001G406000 Sobic001G406000 Sobic003G235500--Sobic001G406000 Sobic001G087700 Sobic001G087700 Sobic001G470900--Sobic001G087700 Sobic001G470900--Sobic002G086800 Sobic001G496300 Sobic001G496300 Sobic001G470900--Sobic001G496300 Sobic006G220300 Sobic006G220300 Sobic001G470900--Sobic006G220300 Sobic001G110900 Sobic001G110900 Sobic001G470900--Sobic001G110900 Sobic004G058700 Sobic004G058700 Sobic001G470900--Sobic004G058700 Sobic001G470900--Sobic003G389700 Sobic001G498000 Sobic001G498000 Sobic001G470900--Sobic001G498000 Sobic004G332100 Sobic004G332100 Sobic001G470900--Sobic004G332100 Sobic004G219400--Sobic001G498000 Sobic002G381700 Sobic002G381700 Sobic004G219400--Sobic002G381700 Sobic003G391200 Sobic003G391200 Sobic004G219400--Sobic003G391200 Sobic001G017300 Sobic001G017300 Sobic004G219400--Sobic001G017300 Sobic009G015100 Sobic009G015100 Sobic004G219400--Sobic009G015100 Sobic004G219400--Sobic006G130300 Sobic004G355700 Sobic004G355700 Sobic004G219400--Sobic004G355700 Sobic001G514800 Sobic001G514800 Sobic004G219400--Sobic001G514800 Sobic004G219400--Sobic008G149000 Sobic001G153200 Sobic001G153200 Sobic002G394400--Sobic001G153200 Sobic001G207700 Sobic001G207700 Sobic002G394400--Sobic001G207700 Sobic001G463000 Sobic001G463000 Sobic002G394400--Sobic001G463000 Sobic002G394400--Sobic003G389700 Sobic001G421300 Sobic001G421300 Sobic002G394400--Sobic001G421300 Sobic001G421900 Sobic001G421900 Sobic002G394400--Sobic001G421900 Sobic002G294500 Sobic002G294500 Sobic002G394400--Sobic002G294500 Sobic001G472600 Sobic001G472600 Sobic002G394400--Sobic001G472600 Sobic003G269200 Sobic003G269200 Sobic002G394400--Sobic003G269200 Sobic009G222200--Sobic010G183100 Sobic003G237600 Sobic003G237600 Sobic009G222200--Sobic003G237600 Sobic009G222200--Sobic001G189100 Sobic009G222200--Sobic010G030800 Sobic001G355600 Sobic001G355600 Sobic009G222200--Sobic001G355600 Sobic009G222200--Sobic007G189700 Sobic009G222200--Sobic003G036100 Sobic004G035700 Sobic004G035700 Sobic009G222200--Sobic004G035700 Sobic004G026300 Sobic004G026300 Sobic001G111700--Sobic004G026300 Sobic001G111700--Sobic010G183100 Sobic001G111700--Sobic007G189700 Sobic004G351700 Sobic004G351700 Sobic001G111700--Sobic004G351700 Sobic003G199800 Sobic003G199800 Sobic001G111700--Sobic003G199800 Sobic001G111700--Sobic009G222200 Sobic001G111700--Sobic003G036100 Sobic004G353700 Sobic004G353700 Sobic001G111700--Sobic004G353700 Sobic008G108400 Sobic008G108400 Sobic001G111700--Sobic008G108400
Octagon: transcription factors


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