Gene annotation
Transcriptome id Sobic.001G087700.1
Synonym OPT3, Sb01g007880, ATOPT3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oligopeptide transporter, putative, expressed
UniProt C5X0A7
Pfam PF03169
Panther DB PTHR22601 PTHR22601:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16370 : oligopeptide transporter
RAP-DB (Rice) LOC_Os03g54000.1 : oligopeptide transporter, putative, expressed
MaizeGDB (Corn) Zm00025a051193 , Zm00025a008179 , Zm00025a056910
Brachypodium PNT74131 , PNT74132 , KQK13179 , KQK13178
Barley HORVU2Hr1G111690.1 , HORVU4Hr1G021520.1 , HORVU4Hr1G021520.2 , HORVU4Hr1G021520.3 , HORVU4Hr1G021520.4 , HORVU0Hr1G005640.1 , HORVU2Hr1G030450.1 , HORVU5Hr1G095460.14 , HORVU5Hr1G095460.3 , HORVU5Hr1G095460.2 , HORVU5Hr1G095460.1 , HORVU5Hr1G095460.7 , HORVU5Hr1G095460.6 , HORVU5Hr1G095460.5 , HORVU5Hr1G095460.4 , HORVU5Hr1G095460.9 , HORVU5Hr1G095460.8 , HORVU0Hr1G013800.10 , HORVU0Hr1G013800.11 , HORVU0Hr1G013800.12 , HORVU0Hr1G013800.13 , HORVU0Hr1G013800.14 , HORVU0Hr1G013800.15 , HORVU0Hr1G013800.16 , HORVU0Hr1G013800.17 , HORVU0Hr1G013800.18 , HORVU0Hr1G013800.19 , HORVU0Hr1G013800.2 , HORVU0Hr1G013800.3 , HORVU0Hr1G013800.1 , HORVU0Hr1G013800.6 , HORVU0Hr1G013800.7 , HORVU0Hr1G013800.4 , HORVU0Hr1G013800.5 , HORVU0Hr1G013800.8 , HORVU0Hr1G013800.9 , HORVU5Hr1G095460.13 , HORVU5Hr1G095460.12 , HORVU5Hr1G095460.11 , HORVU5Hr1G095460.10 , HORVU0Hr1G013800.20 , HORVU5Hr1G095460.15 , HORVU2Hr1G102890.2
Wheat TraesCS2D02G443600 , TraesCS2D02G443600 , TraesCS5D02G400800 , TraesCS5A02G391000 , TraesCS2A02G444400 , TraesCS5B02G395800 , TraesCS2B02G465500
Populus -


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cDNA sequences
Sobic.001G087700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G470900 sulfate transporter, putative, expressed K17469: sulfate transporter 2, low-affinity
2 Sobic.002G086800 expressed protein -
3 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.001G391300 "Expressed in drought, cold and heat"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
5 Sobic.006G220300 - -
6 Sobic.007G160200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed K15104: SLC25A11, solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11
7 Sobic.003G389700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.010G092600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
9 Sobic.004G332100 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.009G155700 - -
11 Sobic.002G216400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.004G155150 - -
13 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
14 Sobic.008G191000 lipoxygenase, putative, expressed K00454: lipoxygenase
15 Sobic.005G209500 expressed protein -
16 Sobic.003G395900 transmembrane amino acid transporter protein, putative, expressed -
17 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G078501 - -
19 Sobic.001G045600 remorin, putative, expressed -
20 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G087700 Sobic001G087700 Sobic001G470900 Sobic001G470900 Sobic001G087700--Sobic001G470900 Sobic002G086800 Sobic002G086800 Sobic001G087700--Sobic002G086800 Sobic001G110900 Sobic001G110900 Sobic001G087700--Sobic001G110900 Sobic001G391300 Sobic001G391300 Sobic001G087700--Sobic001G391300 Sobic006G220300 Sobic006G220300 Sobic001G087700--Sobic006G220300 Sobic007G160200 Sobic007G160200 Sobic001G087700--Sobic007G160200 Sobic003G389700 Sobic003G389700 Sobic001G087700--Sobic003G389700 Sobic010G092600 Sobic010G092600 Sobic001G087700--Sobic010G092600 Sobic004G332100 Sobic004G332100 Sobic001G087700--Sobic004G332100 Sobic001G470900--Sobic001G087700 Sobic001G470900--Sobic002G086800 Sobic001G496300 Sobic001G496300 Sobic001G470900--Sobic001G496300 Sobic001G470900--Sobic006G220300 Sobic001G470900--Sobic001G110900 Sobic004G058700 Sobic004G058700 Sobic001G470900--Sobic004G058700 Sobic001G470900--Sobic003G389700 Sobic001G498000 Sobic001G498000 Sobic001G470900--Sobic001G498000 Sobic001G470900--Sobic004G332100 Sobic002G086800--Sobic001G470900 Sobic002G086800--Sobic001G391300 Sobic002G086800--Sobic001G087700 Sobic002G086800--Sobic004G332100 Sobic003G395900 Sobic003G395900 Sobic002G086800--Sobic003G395900 Sobic002G086800--Sobic006G220300 Sobic008G171000 Sobic008G171000 Sobic002G086800--Sobic008G171000 Sobic002G086800--Sobic003G389700 Sobic006G220200 Sobic006G220200 Sobic002G086800--Sobic006G220200 Sobic001G110900--Sobic006G220300 Sobic003G272400 Sobic003G272400 Sobic001G110900--Sobic003G272400 Sobic001G140200 Sobic001G140200 Sobic001G110900--Sobic001G140200 Sobic003G198150 Sobic003G198150 Sobic001G110900--Sobic003G198150 Sobic010G233450 Sobic010G233450 Sobic001G110900--Sobic010G233450 Sobic002G110200 Sobic002G110200 Sobic001G110900--Sobic002G110200 Sobic001G509400 Sobic001G509400 Sobic001G110900--Sobic001G509400 Sobic002G013900 Sobic002G013900 Sobic001G110900--Sobic002G013900 Sobic005G209500 Sobic005G209500 Sobic001G110900--Sobic005G209500 Sobic004G097300 Sobic004G097300 Sobic001G391300--Sobic004G097300 Sobic004G276200 Sobic004G276200 Sobic001G391300--Sobic004G276200 Sobic001G391300--Sobic002G086800 Sobic001G391300--Sobic006G220200 Sobic001G391300--Sobic004G332100 Sobic003G339700 Sobic003G339700 Sobic001G391300--Sobic003G339700 Sobic001G391300--Sobic001G087700 Sobic001G391300--Sobic001G470900 Sobic009G183101 Sobic009G183101 Sobic001G391300--Sobic009G183101 Sobic006G220300--Sobic006G220200 Sobic006G220300--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220300--Sobic009G155700 Sobic002G216400 Sobic002G216400 Sobic006G220300--Sobic002G216400 Sobic006G220300--Sobic001G087700 Sobic006G220300--Sobic004G332100 Sobic006G220300--Sobic001G470900 Sobic001G045600 Sobic001G045600 Sobic006G220300--Sobic001G045600 Sobic010G260300 Sobic010G260300 Sobic006G220300--Sobic010G260300 Sobic007G140900 Sobic007G140900 Sobic007G160200--Sobic007G140900 Sobic007G160200--Sobic004G332100 Sobic007G160200--Sobic001G087700 Sobic009G037800 Sobic009G037800 Sobic007G160200--Sobic009G037800 Sobic007G160200--Sobic001G391300 Sobic002G184600 Sobic002G184600 Sobic007G160200--Sobic002G184600 Sobic001G523200 Sobic001G523200 Sobic007G160200--Sobic001G523200 Sobic003G238000 Sobic003G238000 Sobic007G160200--Sobic003G238000 Sobic009G195800 Sobic009G195800 Sobic007G160200--Sobic009G195800 Sobic008G149000 Sobic008G149000 Sobic003G389700--Sobic008G149000 Sobic003G389700--Sobic003G395900 Sobic005G110502 Sobic005G110502 Sobic003G389700--Sobic005G110502 Sobic003G235500 Sobic003G235500 Sobic003G389700--Sobic003G235500 Sobic003G389700--Sobic001G470900 Sobic004G219400 Sobic004G219400 Sobic003G389700--Sobic004G219400 Sobic002G394400 Sobic002G394400 Sobic003G389700--Sobic002G394400 Sobic009G222200 Sobic009G222200 Sobic003G389700--Sobic009G222200 Sobic001G111700 Sobic001G111700 Sobic003G389700--Sobic001G111700 Sobic001G125100 Sobic001G125100 Sobic010G092600--Sobic001G125100 Sobic010G006700 Sobic010G006700 Sobic010G092600--Sobic010G006700 Sobic003G078501 Sobic003G078501 Sobic010G092600--Sobic003G078501 Sobic010G092600--Sobic001G045600 Sobic004G331300 Sobic004G331300 Sobic010G092600--Sobic004G331300 Sobic007G217300 Sobic007G217300 Sobic010G092600--Sobic007G217300 Sobic010G092600--Sobic006G220200 Sobic009G000700 Sobic009G000700 Sobic010G092600--Sobic009G000700 Sobic004G155150 Sobic004G155150 Sobic010G092600--Sobic004G155150 Sobic004G332100--Sobic001G391300 Sobic004G332100--Sobic007G160200 Sobic004G332100--Sobic006G220300 Sobic004G332100--Sobic003G339700 Sobic004G332100--Sobic001G110900 Sobic004G332100--Sobic002G086800 Sobic009G069300 Sobic009G069300 Sobic004G332100--Sobic009G069300 Sobic004G332100--Sobic001G470900 Sobic004G332100--Sobic001G087700
Octagon: transcription factors


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