Gene annotation
Transcriptome id Sobic.009G155700.1
Synonym
Functional annotation -
UniProt A0A1B6P911
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G155700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G220300 - -
2 Sobic.010G092600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
3 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
4 Sobic.001G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
5 Sobic.001G391300 "Expressed in drought, cold and heat"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
6 Sobic.001G045600 remorin, putative, expressed -
7 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.002G387200 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
9 Sobic.008G171000 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
10 Sobic.001G470900 sulfate transporter, putative, expressed K17469: sulfate transporter 2, low-affinity
11 Sobic.002G086800 expressed protein -
12 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
13 Sobic.003G149800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
14 Sobic.003G078501 - -
15 Sobic.003G198150 - -
16 Sobic.004G155150 - -
17 Sobic.004G257350 - -
18 Sobic.003G298600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
19 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G083800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclic nucleotide-gated ion channel 2, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic009G155700 Sobic009G155700 Sobic006G220300 Sobic006G220300 Sobic009G155700--Sobic006G220300 Sobic010G092600 Sobic010G092600 Sobic009G155700--Sobic010G092600 Sobic006G220200 Sobic006G220200 Sobic009G155700--Sobic006G220200 Sobic001G087700 Sobic001G087700 Sobic009G155700--Sobic001G087700 Sobic001G391300 Sobic001G391300 Sobic009G155700--Sobic001G391300 Sobic001G045600 Sobic001G045600 Sobic009G155700--Sobic001G045600 Sobic001G110900 Sobic001G110900 Sobic009G155700--Sobic001G110900 Sobic002G387200 Sobic002G387200 Sobic009G155700--Sobic002G387200 Sobic008G171000 Sobic008G171000 Sobic009G155700--Sobic008G171000 Sobic006G220300--Sobic006G220200 Sobic006G220300--Sobic001G110900 Sobic006G220300--Sobic009G155700 Sobic002G216400 Sobic002G216400 Sobic006G220300--Sobic002G216400 Sobic006G220300--Sobic001G087700 Sobic004G332100 Sobic004G332100 Sobic006G220300--Sobic004G332100 Sobic001G470900 Sobic001G470900 Sobic006G220300--Sobic001G470900 Sobic006G220300--Sobic001G045600 Sobic010G260300 Sobic010G260300 Sobic006G220300--Sobic010G260300 Sobic001G125100 Sobic001G125100 Sobic010G092600--Sobic001G125100 Sobic010G006700 Sobic010G006700 Sobic010G092600--Sobic010G006700 Sobic003G078501 Sobic003G078501 Sobic010G092600--Sobic003G078501 Sobic010G092600--Sobic001G045600 Sobic004G331300 Sobic004G331300 Sobic010G092600--Sobic004G331300 Sobic007G217300 Sobic007G217300 Sobic010G092600--Sobic007G217300 Sobic010G092600--Sobic006G220200 Sobic009G000700 Sobic009G000700 Sobic010G092600--Sobic009G000700 Sobic004G155150 Sobic004G155150 Sobic010G092600--Sobic004G155150 Sobic006G220200--Sobic006G220300 Sobic006G220200--Sobic010G092600 Sobic006G220200--Sobic001G391300 Sobic002G148700 Sobic002G148700 Sobic006G220200--Sobic002G148700 Sobic006G220200--Sobic002G216400 Sobic001G496300 Sobic001G496300 Sobic006G220200--Sobic001G496300 Sobic003G238000 Sobic003G238000 Sobic006G220200--Sobic003G238000 Sobic006G220200--Sobic001G110900 Sobic006G220200--Sobic009G155700 Sobic001G087700--Sobic001G470900 Sobic002G086800 Sobic002G086800 Sobic001G087700--Sobic002G086800 Sobic001G087700--Sobic001G110900 Sobic001G087700--Sobic001G391300 Sobic001G087700--Sobic006G220300 Sobic007G160200 Sobic007G160200 Sobic001G087700--Sobic007G160200 Sobic003G389700 Sobic003G389700 Sobic001G087700--Sobic003G389700 Sobic001G087700--Sobic010G092600 Sobic001G087700--Sobic004G332100 Sobic004G097300 Sobic004G097300 Sobic001G391300--Sobic004G097300 Sobic004G276200 Sobic004G276200 Sobic001G391300--Sobic004G276200 Sobic001G391300--Sobic002G086800 Sobic001G391300--Sobic006G220200 Sobic001G391300--Sobic004G332100 Sobic003G339700 Sobic003G339700 Sobic001G391300--Sobic003G339700 Sobic001G391300--Sobic001G087700 Sobic001G391300--Sobic001G470900 Sobic009G183101 Sobic009G183101 Sobic001G391300--Sobic009G183101 Sobic001G045600--Sobic010G092600 Sobic003G198150 Sobic003G198150 Sobic001G045600--Sobic003G198150 Sobic002G189000 Sobic002G189000 Sobic001G045600--Sobic002G189000 Sobic001G045600--Sobic001G110900 Sobic001G045600--Sobic010G260300 Sobic001G045600--Sobic006G220300 Sobic002G271100 Sobic002G271100 Sobic001G045600--Sobic002G271100 Sobic003G066900 Sobic003G066900 Sobic001G045600--Sobic003G066900 Sobic002G359000 Sobic002G359000 Sobic001G045600--Sobic002G359000 Sobic001G110900--Sobic006G220300 Sobic003G272400 Sobic003G272400 Sobic001G110900--Sobic003G272400 Sobic001G140200 Sobic001G140200 Sobic001G110900--Sobic001G140200 Sobic001G110900--Sobic003G198150 Sobic010G233450 Sobic010G233450 Sobic001G110900--Sobic010G233450 Sobic002G110200 Sobic002G110200 Sobic001G110900--Sobic002G110200 Sobic001G509400 Sobic001G509400 Sobic001G110900--Sobic001G509400 Sobic002G013900 Sobic002G013900 Sobic001G110900--Sobic002G013900 Sobic005G209500 Sobic005G209500 Sobic001G110900--Sobic005G209500 Sobic002G387200--Sobic003G198150 Sobic003G198200 Sobic003G198200 Sobic002G387200--Sobic003G198200 Sobic002G387200--Sobic001G110900 Sobic002G110300 Sobic002G110300 Sobic002G387200--Sobic002G110300 Sobic002G387200--Sobic001G140200 Sobic002G079801 Sobic002G079801 Sobic002G387200--Sobic002G079801 Sobic003G374500 Sobic003G374500 Sobic002G387200--Sobic003G374500 Sobic004G337900 Sobic004G337900 Sobic002G387200--Sobic004G337900 Sobic009G183000 Sobic009G183000 Sobic002G387200--Sobic009G183000 Sobic008G171000--Sobic004G276200 Sobic008G171000--Sobic002G086800 Sobic008G171000--Sobic001G391300 Sobic008G171000--Sobic006G220300 Sobic002G321300 Sobic002G321300 Sobic008G171000--Sobic002G321300 Sobic007G213100 Sobic007G213100 Sobic008G171000--Sobic007G213100 Sobic008G171000--Sobic004G332100 Sobic008G171000--Sobic009G155700 Sobic003G298600 Sobic003G298600 Sobic008G171000--Sobic003G298600
Octagon: transcription factors


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